BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016627
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143627.1| PREDICTED: F-box protein At4g00755-like [Cuc...    72   4e-11
ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Gly...    72   5e-11
ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Gly...    69   3e-10
gb|AFK42252.1| unknown [Lotus japonicus]                               66   3e-09

>ref|XP_004143627.1| PREDICTED: F-box protein At4g00755-like [Cucumis sativus]
           gi|449527838|ref|XP_004170916.1| PREDICTED: F-box
           protein At4g00755-like [Cucumis sativus]
          Length = 370

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
 Frame = +3

Query: 3   LFYICVSHVQVVGRPLLPPFAAEVINHSGKSVLKY---CCESDCTERACEVDHGEPSRQN 173
           L+Y+CV HV+VVGRPLLP +  ++I+ SGK +LKY     ES  T       HG      
Sbjct: 273 LYYLCVCHVEVVGRPLLPEYDMDIIDQSGKGILKYFPNLHESSSTNGQISHSHG-----R 327

Query: 174 SLTARFMRR-AGGWERVIMNTLLG 242
           ++T+RF+RR   GWE ++ +TLLG
Sbjct: 328 AITSRFVRRGVHGWEHIVWHTLLG 351


>ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 374

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
 Frame = +3

Query: 3   LFYICVSHVQVVGRPLLPPFAAEVINHSGKSVLKYCCESDC----TERACEVDHGEPSRQ 170
           LFYIC+SHVQ +GR + P F  ++ + SGK  LKYC + DC    +  +   D   PSR 
Sbjct: 277 LFYICISHVQAMGRSISPEFDVKIHHPSGKCTLKYCPQIDCYVSSSTSSQRSDSSNPSRL 336

Query: 171 NSLTARFMRR-AGGWERVIMNTLLGNVEDYSDNDSDEE 281
            ++T+  M+R    WE+ +++ LLG   D    D+D++
Sbjct: 337 RTITSNIMQRGVRRWEQFLLSALLGTATDPVVVDNDDQ 374


>ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 372

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
 Frame = +3

Query: 3   LFYICVSHVQVVGRPLLPPFAAEVINHSGKSVLKYCCESDC----TERACEVDHGEPSRQ 170
           LFYIC+SHVQV+GR L P F  ++ + SGK  LKYC ++DC       +   +   PSR 
Sbjct: 277 LFYICISHVQVMGRLLFPEFDVKIHHWSGKCTLKYCPQTDCYMSSPTSSPRSNSSNPSRL 336

Query: 171 NSLTARFMRR-AGGWERVIMNTLLGNVEDYSDND 269
            ++T+  M+R    WE+ ++  LLG      DN+
Sbjct: 337 RTITSSIMQRGVRRWEQFLLGALLGTGPVVVDNE 370


>gb|AFK42252.1| unknown [Lotus japonicus]
          Length = 304

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
 Frame = +3

Query: 3   LFYICVSHVQVVGRPLLPPFAAEVINHSGKSVLKYCCESD-CTERACE--VDHGEPSRQN 173
           LFYIC+SHVQVVG+PL P F  ++ + SGK  LKY  ++D C        ++   PSR  
Sbjct: 217 LFYICISHVQVVGQPLSPAFDIKIHHPSGKCTLKYFPQTDWCVPSTSSPTIESNNPSRLR 276

Query: 174 SLTARFMRRAGGWERVIMNTLLGN 245
           SL    +RR   WE++I+  LLG+
Sbjct: 277 SLMQSGVRR---WEQIILGALLGS 297