BLASTX nr result

ID: Coptis24_contig00016624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016624
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321517.1| predicted protein [Populus trichocarpa] gi|2...   307   2e-81
ref|XP_002530476.1| down syndrome critical region protein, putat...   306   6e-81
ref|XP_002278791.1| PREDICTED: Down syndrome critical region pro...   303   4e-80
ref|XP_003534139.1| PREDICTED: Down syndrome critical region pro...   302   6e-80
emb|CBI15584.3| unnamed protein product [Vitis vinifera]              300   3e-79

>ref|XP_002321517.1| predicted protein [Populus trichocarpa] gi|222868513|gb|EEF05644.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score =  307 bits (787), Expect = 2e-81
 Identities = 153/194 (78%), Positives = 172/194 (88%)
 Frame = -3

Query: 897 DIVRGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGFRV 718
           DI RGYL+K +SA +E I+ES  ++L + PVSPEM  FYITQDTQRHPLLPE+ SGGFRV
Sbjct: 126 DIARGYLYKSLSATMEVIVESDKADLLERPVSPEMAIFYITQDTQRHPLLPEIKSGGFRV 185

Query: 717 AGKIITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQIAD 538
            G++ T CSLLDP+SGELTVE SAVPI+SIDIH+LR+ESIL+GEKIVTETSLIQTTQIAD
Sbjct: 186 TGRMSTLCSLLDPISGELTVETSAVPISSIDIHLLRVESILMGEKIVTETSLIQTTQIAD 245

Query: 537 GDVCRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPRLW 358
           GDVCR++TLPIYVI PRLLTCP+V AGPFSIEF+VSIVISFQSELSKLH K DPR PRLW
Sbjct: 246 GDVCRNLTLPIYVILPRLLTCPSVFAGPFSIEFKVSIVISFQSELSKLHKKSDPRTPRLW 305

Query: 357 LAMETLPLRLFRTR 316
           LAMETLPL L RTR
Sbjct: 306 LAMETLPLELVRTR 319


>ref|XP_002530476.1| down syndrome critical region protein, putative [Ricinus communis]
           gi|223529973|gb|EEF31899.1| down syndrome critical
           region protein, putative [Ricinus communis]
          Length = 272

 Score =  306 bits (783), Expect = 6e-81
 Identities = 152/194 (78%), Positives = 170/194 (87%)
 Frame = -3

Query: 897 DIVRGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGFRV 718
           DI+RGYLHK +S  +EFI+ES   +L + PVSPEM  FYITQDTQRHPLLPEL SGGFRV
Sbjct: 79  DIIRGYLHKSLSTTMEFIVESDKVDLLERPVSPEMAIFYITQDTQRHPLLPELKSGGFRV 138

Query: 717 AGKIITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQIAD 538
            G+I TQCSLLDP+SGEL VE SAV + SIDIH+LR+ESIL+GEKIVTETSLIQTTQIAD
Sbjct: 139 TGRISTQCSLLDPISGELIVERSAVSLRSIDIHLLRVESILLGEKIVTETSLIQTTQIAD 198

Query: 537 GDVCRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPRLW 358
           GDVCR++T PIYVI PRLLTCPTVLAGPFSIEF+VSIVISFQSELS+LH K DPR PRLW
Sbjct: 199 GDVCRNVTFPIYVILPRLLTCPTVLAGPFSIEFKVSIVISFQSELSRLHTKSDPRTPRLW 258

Query: 357 LAMETLPLRLFRTR 316
           LAMETLPL L R++
Sbjct: 259 LAMETLPLELVRSK 272


>ref|XP_002278791.1| PREDICTED: Down syndrome critical region protein 3 homolog [Vitis
           vinifera]
          Length = 314

 Score =  303 bits (776), Expect = 4e-80
 Identities = 148/194 (76%), Positives = 173/194 (89%)
 Frame = -3

Query: 897 DIVRGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGFRV 718
           D++RGYL+K +SA +EFII+S  +NL + PV PEMV FYITQDTQRHPLLPEL SGGFRV
Sbjct: 121 DVMRGYLYKSLSATMEFIIDSDKANLFEPPVPPEMVIFYITQDTQRHPLLPELRSGGFRV 180

Query: 717 AGKIITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQIAD 538
            GK+ +QCSLLDP+SGEL VEASAVPI+SID+ + R+ESILVGEKIVTE+SLIQTTQIAD
Sbjct: 181 TGKVSSQCSLLDPISGELIVEASAVPIHSIDLQLHRVESILVGEKIVTESSLIQTTQIAD 240

Query: 537 GDVCRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPRLW 358
           GDVCR +T+PIYVI PRLLTCPTVLAGPFSIEF++SIVI+F+SEL KLHPK DP+ PRLW
Sbjct: 241 GDVCRRVTIPIYVILPRLLTCPTVLAGPFSIEFKISIVITFESELVKLHPKSDPKTPRLW 300

Query: 357 LAMETLPLRLFRTR 316
           LAMET+PL L RT+
Sbjct: 301 LAMETIPLELIRTK 314


>ref|XP_003534139.1| PREDICTED: Down syndrome critical region protein 3 homolog [Glycine
           max]
          Length = 316

 Score =  302 bits (774), Expect = 6e-80
 Identities = 149/194 (76%), Positives = 169/194 (87%)
 Frame = -3

Query: 897 DIVRGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGFRV 718
           DI RGYLHK +SA +E I+ES  ++L + P+SPEM  FYITQDTQRHPLLPEL SGGFRV
Sbjct: 123 DISRGYLHKSLSATMELIVESDKADLLQRPLSPEMAIFYITQDTQRHPLLPELKSGGFRV 182

Query: 717 AGKIITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQIAD 538
            GKI TQCSL  P+SGELTVE SAVPI+SID+ + R+ESIL+GEKIVTETSL+QTTQIAD
Sbjct: 183 TGKICTQCSLSGPISGELTVETSAVPIHSIDLQLFRVESILLGEKIVTETSLVQTTQIAD 242

Query: 537 GDVCRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPRLW 358
           GDVCR+MTLPIYVI PRLLTCPT LAGPFS+EF+V+IVISFQSELSKLH K DP+ PRLW
Sbjct: 243 GDVCRNMTLPIYVIVPRLLTCPTTLAGPFSVEFKVAIVISFQSELSKLHKKSDPKTPRLW 302

Query: 357 LAMETLPLRLFRTR 316
           LAMETLPL L RT+
Sbjct: 303 LAMETLPLELIRTK 316


>emb|CBI15584.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  300 bits (768), Expect = 3e-79
 Identities = 146/194 (75%), Positives = 172/194 (88%)
 Frame = -3

Query: 897 DIVRGYLHKPISAMVEFIIESKNSNLPKAPVSPEMVSFYITQDTQRHPLLPELFSGGFRV 718
           D++RGYL+K +SA +EFII+S  +NL + PV PEMV FYITQDTQRHPLLPEL SGGFRV
Sbjct: 121 DVMRGYLYKSLSATMEFIIDSDKANLFEPPVPPEMVIFYITQDTQRHPLLPELRSGGFRV 180

Query: 717 AGKIITQCSLLDPLSGELTVEASAVPINSIDIHILRIESILVGEKIVTETSLIQTTQIAD 538
            GK+ +QCSLLDP+SGEL VEASAVPI+SID+ + R+ESILVGEKIVTE+SLIQTTQ +D
Sbjct: 181 TGKVSSQCSLLDPISGELIVEASAVPIHSIDLQLHRVESILVGEKIVTESSLIQTTQASD 240

Query: 537 GDVCRSMTLPIYVIFPRLLTCPTVLAGPFSIEFQVSIVISFQSELSKLHPKYDPRIPRLW 358
           GDVCR +T+PIYVI PRLLTCPTVLAGPFSIEF++SIVI+F+SEL KLHPK DP+ PRLW
Sbjct: 241 GDVCRRVTIPIYVILPRLLTCPTVLAGPFSIEFKISIVITFESELVKLHPKSDPKTPRLW 300

Query: 357 LAMETLPLRLFRTR 316
           LAMET+PL L RT+
Sbjct: 301 LAMETIPLELIRTK 314


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