BLASTX nr result
ID: Coptis24_contig00016618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00016618
(2197 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281042.1| PREDICTED: GTPase HflX-like [Vitis vinifera] 720 0.0
emb|CBI19757.3| unnamed protein product [Vitis vinifera] 715 0.0
ref|XP_003589327.1| GTP-binding protein hflX [Medicago truncatul... 697 0.0
ref|XP_004154856.1| PREDICTED: GTPase HflX-like [Cucumis sativus] 694 0.0
ref|XP_002510444.1| GTP-binding protein hflx, putative [Ricinus ... 699 0.0
>ref|XP_002281042.1| PREDICTED: GTPase HflX-like [Vitis vinifera]
Length = 547
Score = 720 bits (1859), Expect(2) = 0.0
Identities = 364/419 (86%), Positives = 396/419 (94%)
Frame = -1
Query: 1480 EKCYLVAVERKSEQDVFFGIEESIKELAQLADTAGLMVVGSTSQKLVTPNPRTYIGSGKV 1301
EK YLVAVE K + + FGIEES+KELAQLADTAGLMVVGSTSQKL TPN RTYIGSGKV
Sbjct: 129 EKAYLVAVELKGDMEYSFGIEESLKELAQLADTAGLMVVGSTSQKLSTPNRRTYIGSGKV 188
Query: 1300 SEIKNAIHALDVETVIFDDELSAGQLRNLEKAFGGEIRVCDRTALILDIFNQRAATHEAA 1121
+EIK+AIHALDVETVIFDDELSAGQLRNLEKAFGG++RVCDRTALILDIFNQRAATHEAA
Sbjct: 189 AEIKSAIHALDVETVIFDDELSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAA 248
Query: 1120 LQVALAQMEYQLPRLTKMWTHLERQAGGQVKGMGEKQIEVDKRILRTQIGILKKELESVR 941
LQVALAQMEYQLPRLTKMWTHLERQAGG+VKGMGEKQIEVDKRILRTQIG LKKELESVR
Sbjct: 249 LQVALAQMEYQLPRLTKMWTHLERQAGGKVKGMGEKQIEVDKRILRTQIGALKKELESVR 308
Query: 940 KHRRQYRNRRVSVPIPVVSLVGYTNAGKSTLLNRLTGANVLAEDRLFATLDPTTRRVQMK 761
+HR+QYRNRR SVP+PVVSLVGYTNAGKSTLLNRLTG+NVLAEDRLFATLDPTTRRVQMK
Sbjct: 309 QHRKQYRNRRFSVPVPVVSLVGYTNAGKSTLLNRLTGSNVLAEDRLFATLDPTTRRVQMK 368
Query: 760 NGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLSQQQIDAVDKVL 581
NG+EFLLTDTVGFIQKLPT LVAAFRATLEEISESSLLVHVVDISHPL++QQIDAVDKVL
Sbjct: 369 NGREFLLTDTVGFIQKLPTMLVAAFRATLEEISESSLLVHVVDISHPLAEQQIDAVDKVL 428
Query: 580 SELDVAAIPQLIVWNKVDKASDPGKLKIKANEREDIICVSALTGDGLQDFCDAVQARLKD 401
SELDV +IP+L+VWNKVDKAS+P K+K++A +RED++C+SAL GDGL +FC+AVQ +LKD
Sbjct: 429 SELDVLSIPRLMVWNKVDKASNPQKIKLEAEKREDVVCISALNGDGLNEFCNAVQEKLKD 488
Query: 400 SMVWVEALVPFDKGELLNTIHQVGVVEGTEYTEKGTLVRAHVPLPLARQLTPMRQLCAS 224
SMVWVEALVPFDKGELL+TIHQVG+VE TEYTE GTLV+AHVPL AR LTPMRQLC S
Sbjct: 489 SMVWVEALVPFDKGELLSTIHQVGMVERTEYTENGTLVKAHVPLRFARLLTPMRQLCKS 547
Score = 32.3 bits (72), Expect(2) = 0.0
Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = -2
Query: 1791 VQVFSEDVVESSTELVSLPENQQLVQSESSGS--SNGALEKFTEKENFFPTRPKSKVQVR 1618
V+V V S + +SLPE V+ E + A K EK PTR K K
Sbjct: 52 VRVLQRGVGLVSPDDLSLPEPVIDVKEEEVFAVVDGVAGTKAEEKTLKAPTRVKKK---G 108
Query: 1617 KDEEEEERRFILRNGREVF 1561
+ E ++ RF LRNGREVF
Sbjct: 109 GEGESDDNRFKLRNGREVF 127
>emb|CBI19757.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 715 bits (1846), Expect(2) = 0.0
Identities = 364/421 (86%), Positives = 396/421 (94%), Gaps = 2/421 (0%)
Frame = -1
Query: 1480 EKCYLVAVERKSEQDVFFGIEESIKELAQLADTAGLMVVGSTSQKLVTPNPRTYIGSGKV 1301
EK YLVAVE K + + FGIEES+KELAQLADTAGLMVVGSTSQKL TPN RTYIGSGKV
Sbjct: 141 EKAYLVAVELKGDMEYSFGIEESLKELAQLADTAGLMVVGSTSQKLSTPNRRTYIGSGKV 200
Query: 1300 SEIKNAIHALDVETVIFDDELSAGQLRNLEKAFGGEIRVCDRTALILDIFNQRAATHEAA 1121
+EIK+AIHALDVETVIFDDELSAGQLRNLEKAFGG++RVCDRTALILDIFNQRAATHEAA
Sbjct: 201 AEIKSAIHALDVETVIFDDELSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAA 260
Query: 1120 LQ--VALAQMEYQLPRLTKMWTHLERQAGGQVKGMGEKQIEVDKRILRTQIGILKKELES 947
LQ VALAQMEYQLPRLTKMWTHLERQAGG+VKGMGEKQIEVDKRILRTQIG LKKELES
Sbjct: 261 LQANVALAQMEYQLPRLTKMWTHLERQAGGKVKGMGEKQIEVDKRILRTQIGALKKELES 320
Query: 946 VRKHRRQYRNRRVSVPIPVVSLVGYTNAGKSTLLNRLTGANVLAEDRLFATLDPTTRRVQ 767
VR+HR+QYRNRR SVP+PVVSLVGYTNAGKSTLLNRLTG+NVLAEDRLFATLDPTTRRVQ
Sbjct: 321 VRQHRKQYRNRRFSVPVPVVSLVGYTNAGKSTLLNRLTGSNVLAEDRLFATLDPTTRRVQ 380
Query: 766 MKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLSQQQIDAVDK 587
MKNG+EFLLTDTVGFIQKLPT LVAAFRATLEEISESSLLVHVVDISHPL++QQIDAVDK
Sbjct: 381 MKNGREFLLTDTVGFIQKLPTMLVAAFRATLEEISESSLLVHVVDISHPLAEQQIDAVDK 440
Query: 586 VLSELDVAAIPQLIVWNKVDKASDPGKLKIKANEREDIICVSALTGDGLQDFCDAVQARL 407
VLSELDV +IP+L+VWNKVDKAS+P K+K++A +RED++C+SAL GDGL +FC+AVQ +L
Sbjct: 441 VLSELDVLSIPRLMVWNKVDKASNPQKIKLEAEKREDVVCISALNGDGLNEFCNAVQEKL 500
Query: 406 KDSMVWVEALVPFDKGELLNTIHQVGVVEGTEYTEKGTLVRAHVPLPLARQLTPMRQLCA 227
KDSMVWVEALVPFDKGELL+TIHQVG+VE TEYTE GTLV+AHVPL AR LTPMRQLC
Sbjct: 501 KDSMVWVEALVPFDKGELLSTIHQVGMVERTEYTENGTLVKAHVPLRFARLLTPMRQLCK 560
Query: 226 S 224
S
Sbjct: 561 S 561
Score = 32.3 bits (72), Expect(2) = 0.0
Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = -2
Query: 1791 VQVFSEDVVESSTELVSLPENQQLVQSESSGS--SNGALEKFTEKENFFPTRPKSKVQVR 1618
V+V V S + +SLPE V+ E + A K EK PTR K K
Sbjct: 64 VRVLQRGVGLVSPDDLSLPEPVIDVKEEEVFAVVDGVAGTKAEEKTLKAPTRVKKK---G 120
Query: 1617 KDEEEEERRFILRNGREVF 1561
+ E ++ RF LRNGREVF
Sbjct: 121 GEGESDDNRFKLRNGREVF 139
>ref|XP_003589327.1| GTP-binding protein hflX [Medicago truncatula]
gi|358348476|ref|XP_003638272.1| GTP-binding protein hflX
[Medicago truncatula] gi|355478375|gb|AES59578.1|
GTP-binding protein hflX [Medicago truncatula]
gi|355504207|gb|AES85410.1| GTP-binding protein hflX
[Medicago truncatula]
Length = 545
Score = 697 bits (1800), Expect(2) = 0.0
Identities = 345/417 (82%), Positives = 392/417 (94%)
Frame = -1
Query: 1480 EKCYLVAVERKSEQDVFFGIEESIKELAQLADTAGLMVVGSTSQKLVTPNPRTYIGSGKV 1301
EK YLV VERK E FGIE+S+ EL QLADTAGL+VV ST QKL +PNPRTYIGSGKV
Sbjct: 125 EKAYLVGVERKGEVSDSFGIEDSLSELEQLADTAGLLVVASTYQKLASPNPRTYIGSGKV 184
Query: 1300 SEIKNAIHALDVETVIFDDELSAGQLRNLEKAFGGEIRVCDRTALILDIFNQRAATHEAA 1121
SEIK+AI+ALDVETVIFDDELSAGQLRNLEK FGG++RVCDRTALILDIFNQRAATHEA+
Sbjct: 185 SEIKSAINALDVETVIFDDELSAGQLRNLEKVFGGDVRVCDRTALILDIFNQRAATHEAS 244
Query: 1120 LQVALAQMEYQLPRLTKMWTHLERQAGGQVKGMGEKQIEVDKRILRTQIGILKKELESVR 941
LQVALAQMEYQLPRLTKMWTHLERQ+GGQVKGMGEKQIEVDKRILR QIG+LKKELESVR
Sbjct: 245 LQVALAQMEYQLPRLTKMWTHLERQSGGQVKGMGEKQIEVDKRILRNQIGVLKKELESVR 304
Query: 940 KHRRQYRNRRVSVPIPVVSLVGYTNAGKSTLLNRLTGANVLAEDRLFATLDPTTRRVQMK 761
KHR+QYRNRR+SVP+PVVSLVGYTNAGKSTLLN+LTGA+VLAED+LFATLDPTTRRVQMK
Sbjct: 305 KHRKQYRNRRLSVPVPVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMK 364
Query: 760 NGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLSQQQIDAVDKVL 581
NGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHV+DISHPL+ QQI+AVDKVL
Sbjct: 365 NGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVIDISHPLADQQINAVDKVL 424
Query: 580 SELDVAAIPQLIVWNKVDKASDPGKLKIKANEREDIICVSALTGDGLQDFCDAVQARLKD 401
SELDV++IP L+VWNK+D+ASDP K++++A +R+D++C+SAL+GDG+Q+FC+AVQ +LKD
Sbjct: 425 SELDVSSIPTLMVWNKIDRASDPQKIRLEAGKRDDVVCISALSGDGIQEFCNAVQDKLKD 484
Query: 400 SMVWVEALVPFDKGELLNTIHQVGVVEGTEYTEKGTLVRAHVPLPLARQLTPMRQLC 230
SMVWVEAL+PF+ G+LL+TIHQVG+VE TEYTE+GT ++AHVPL AR LTPMRQLC
Sbjct: 485 SMVWVEALLPFENGDLLSTIHQVGMVEKTEYTEQGTYIKAHVPLRFARLLTPMRQLC 541
Score = 34.3 bits (77), Expect(2) = 0.0
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 14/81 (17%)
Frame = -2
Query: 1761 SSTELVSLPENQQLVQSESSGSSNGALEKFTEKENF-----FPTRPKSKVQVRKDEEEE- 1600
SS L P N + +Q SS S++ L E+E P KS +++K ++++
Sbjct: 43 SSFSLNVTPHNTEQLQLSSSFSNDAVLLPIQEQEQQQSSPPTPDEDKSTTKLKKKKKDKN 102
Query: 1599 --------ERRFILRNGREVF 1561
+ RF LRNGREVF
Sbjct: 103 DDDNSSNIDNRFKLRNGREVF 123
>ref|XP_004154856.1| PREDICTED: GTPase HflX-like [Cucumis sativus]
Length = 548
Score = 694 bits (1791), Expect(2) = 0.0
Identities = 345/417 (82%), Positives = 388/417 (93%)
Frame = -1
Query: 1480 EKCYLVAVERKSEQDVFFGIEESIKELAQLADTAGLMVVGSTSQKLVTPNPRTYIGSGKV 1301
EK YLV VERK + F I+ES+KELAQLADTAGL VVGST QKL +PNPRTYIGSGKV
Sbjct: 130 EKAYLVGVERKGDVAQLFSIDESLKELAQLADTAGLKVVGSTYQKLASPNPRTYIGSGKV 189
Query: 1300 SEIKNAIHALDVETVIFDDELSAGQLRNLEKAFGGEIRVCDRTALILDIFNQRAATHEAA 1121
+EIK+AIHAL +ETVIFDDELSAGQLRNLEK+FGG++RVCDRTALILDIFNQRAATHEA+
Sbjct: 190 AEIKSAIHALGIETVIFDDELSAGQLRNLEKSFGGDVRVCDRTALILDIFNQRAATHEAS 249
Query: 1120 LQVALAQMEYQLPRLTKMWTHLERQAGGQVKGMGEKQIEVDKRILRTQIGILKKELESVR 941
LQVALAQMEYQLPRLTKMWTHLERQAGGQVKGMGEKQIEVDKRILRTQIG+L+KELESVR
Sbjct: 250 LQVALAQMEYQLPRLTKMWTHLERQAGGQVKGMGEKQIEVDKRILRTQIGVLRKELESVR 309
Query: 940 KHRRQYRNRRVSVPIPVVSLVGYTNAGKSTLLNRLTGANVLAEDRLFATLDPTTRRVQMK 761
HR+QYR+RR SVP+PVVSLVGYTNAGKSTLLN LTGA VLAEDRLFATLDPTTRRVQMK
Sbjct: 310 VHRKQYRSRRFSVPVPVVSLVGYTNAGKSTLLNHLTGAEVLAEDRLFATLDPTTRRVQMK 369
Query: 760 NGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLSQQQIDAVDKVL 581
NG EFLLTDTVGFIQKLPT LVAAFRATLEEISESSLLVHVVDISHPL++QQI+AVDKVL
Sbjct: 370 NGNEFLLTDTVGFIQKLPTMLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVL 429
Query: 580 SELDVAAIPQLIVWNKVDKASDPGKLKIKANEREDIICVSALTGDGLQDFCDAVQARLKD 401
SELDV++IP+L+VWNKVDK +DP ++++A++R D++CVSAL+GDGL +FCDAVQ++LKD
Sbjct: 430 SELDVSSIPKLMVWNKVDKVTDPQHIRLEADKRGDVVCVSALSGDGLDEFCDAVQSKLKD 489
Query: 400 SMVWVEALVPFDKGELLNTIHQVGVVEGTEYTEKGTLVRAHVPLPLARQLTPMRQLC 230
SMVW+EAL+PFD+GELL+T+HQVGVVE EYTE GTLV+AHVPL +R LTPMRQLC
Sbjct: 490 SMVWIEALIPFDRGELLSTVHQVGVVEKAEYTENGTLVQAHVPLRFSRLLTPMRQLC 546
Score = 32.3 bits (72), Expect(2) = 0.0
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = -2
Query: 1668 EKENFFPTRPKSKVQVRKDEEEEERRFILRNGREVF 1561
E ++ P+R K K Q +D + E RF LRNGREVF
Sbjct: 95 EPKSQLPSRVKKKTQ--EDGDSIEGRFKLRNGREVF 128
>ref|XP_002510444.1| GTP-binding protein hflx, putative [Ricinus communis]
gi|223551145|gb|EEF52631.1| GTP-binding protein hflx,
putative [Ricinus communis]
Length = 541
Score = 699 bits (1805), Expect(2) = 0.0
Identities = 350/417 (83%), Positives = 390/417 (93%)
Frame = -1
Query: 1480 EKCYLVAVERKSEQDVFFGIEESIKELAQLADTAGLMVVGSTSQKLVTPNPRTYIGSGKV 1301
EK YLV VERK + FGIEES+KELAQLADTAGL VVGST QKL +PNPRTYIGSGKV
Sbjct: 123 EKGYLVGVERKGDTLDSFGIEESLKELAQLADTAGLTVVGSTYQKLTSPNPRTYIGSGKV 182
Query: 1300 SEIKNAIHALDVETVIFDDELSAGQLRNLEKAFGGEIRVCDRTALILDIFNQRAATHEAA 1121
+EIK+AIHALD+ETVIFDDELS GQLRNLEK FGG++RVCDRTALILDIFNQRAATHEA+
Sbjct: 183 AEIKSAIHALDIETVIFDDELSPGQLRNLEKIFGGDVRVCDRTALILDIFNQRAATHEAS 242
Query: 1120 LQVALAQMEYQLPRLTKMWTHLERQAGGQVKGMGEKQIEVDKRILRTQIGILKKELESVR 941
LQVALAQMEYQLPRLT+MWTHLERQAGG+VKGMGEKQIEVDKRILRTQIG+LKKELESVR
Sbjct: 243 LQVALAQMEYQLPRLTRMWTHLERQAGGKVKGMGEKQIEVDKRILRTQIGVLKKELESVR 302
Query: 940 KHRRQYRNRRVSVPIPVVSLVGYTNAGKSTLLNRLTGANVLAEDRLFATLDPTTRRVQMK 761
HR+QYRNRR SVP+PVVSLVGYTNAGKSTLLN+LTGANVLAEDRLFATLDPTTRRVQMK
Sbjct: 303 NHRKQYRNRRTSVPVPVVSLVGYTNAGKSTLLNQLTGANVLAEDRLFATLDPTTRRVQMK 362
Query: 760 NGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLSQQQIDAVDKVL 581
NG EFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPL++QQIDAVD+VL
Sbjct: 363 NGNEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIDAVDRVL 422
Query: 580 SELDVAAIPQLIVWNKVDKASDPGKLKIKANEREDIICVSALTGDGLQDFCDAVQARLKD 401
SELDVA+I +L+VWNKVD+ S+P ++K++A +R+D++C+SAL GDGLQ+FC AVQ +LKD
Sbjct: 423 SELDVASISKLMVWNKVDRVSNPSEIKLEAEKRQDVVCISALGGDGLQEFCIAVQEKLKD 482
Query: 400 SMVWVEALVPFDKGELLNTIHQVGVVEGTEYTEKGTLVRAHVPLPLARQLTPMRQLC 230
SMVWVEALVPF+KG+LL+TIHQVG+VE TEYTE GTL++AHVPL AR LTPMRQLC
Sbjct: 483 SMVWVEALVPFEKGDLLSTIHQVGMVERTEYTENGTLIKAHVPLRFARLLTPMRQLC 539
Score = 26.6 bits (57), Expect(2) = 0.0
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 1710 ESSGSSNGALEKFTEKENFFPTRPKSKVQVRK-DEEEEERRFILRNGREVF 1561
E G NG +E + P +K + +K D + E RF LRNGREV+
Sbjct: 74 EVHGPVNGVAGPASEDK---PAVSSTKFRKKKQDGDSLEDRFKLRNGREVY 121