BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016612
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518432.1| PREDICTED: sister chromatid cohesion 1 prote...   228   6e-58
ref|XP_003545224.1| PREDICTED: sister chromatid cohesion 1 prote...   228   1e-57
ref|XP_003616515.1| Sister chromatid cohesion 1 protein [Medicag...   224   1e-56
ref|XP_003616681.1| Double-strand-break repair protein rad21-lik...   216   3e-54
ref|NP_001056426.1| Os05g0580500 [Oryza sativa Japonica Group] g...   209   3e-52

>ref|XP_003518432.1| PREDICTED: sister chromatid cohesion 1 protein 1-like [Glycine max]
          Length = 623

 Score =  228 bits (582), Expect = 6e-58
 Identities = 119/191 (62%), Positives = 141/191 (73%)
 Frame = +1

Query: 82  MFYSHQLLARKAPLGQIWMAATMHAKMNRXXXXXXXXXXXCEEILNPQVPMALRLSGILM 261
           MFYSHQLLARKAPLGQIWMAATMHAK+NR           CEEILNP +PMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIINICEEILNPSIPMALRLSGILM 60

Query: 262 GGVVIVYERKVKLLFDDVSRLLVEINEAWKIKPVNEDPTVLPKAKSQAKFEAVTLPDKNR 441
           GGVVIVYERKVKLL+DDV+R LVEINEAWK+K    DPT+LPK+KS+AK EAVTLP    
Sbjct: 61  GGVVIVYERKVKLLYDDVTRFLVEINEAWKVKAA-PDPTLLPKSKSKAKKEAVTLPGTGE 119

Query: 442 EIVEEIERSLNASSKTTAIRFEQTRYIHMRLDSVDDPVINDEIPREEDLNEQHHQADAAN 621
             V +IE+SL  S+  T   F+   Y  MRLDSVD+P I++    ++D +E  HQ DA N
Sbjct: 120 TNVADIEQSLQFSNTGTTNGFQHNAYFTMRLDSVDEPFISNGAREDQDQSELLHQVDAEN 179

Query: 622 ITLLDPIDSYQ 654
           ITL +  +++Q
Sbjct: 180 ITLFERFETFQ 190


>ref|XP_003545224.1| PREDICTED: sister chromatid cohesion 1 protein 1-like [Glycine max]
          Length = 520

 Score =  228 bits (580), Expect = 1e-57
 Identities = 117/191 (61%), Positives = 141/191 (73%)
 Frame = +1

Query: 82  MFYSHQLLARKAPLGQIWMAATMHAKMNRXXXXXXXXXXXCEEILNPQVPMALRLSGILM 261
           MFYSHQLLARKAPLGQIWMAATMHAK+NR           CEEILNP +PMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSIPMALRLSGILM 60

Query: 262 GGVVIVYERKVKLLFDDVSRLLVEINEAWKIKPVNEDPTVLPKAKSQAKFEAVTLPDKNR 441
           GGVVIVYERKVKLL++DV+R LVEINEAWK+K    DPT+LPK+KS+AK EAVTLP    
Sbjct: 61  GGVVIVYERKVKLLYEDVTRFLVEINEAWKVKTA-PDPTLLPKSKSKAKKEAVTLPGTGE 119

Query: 442 EIVEEIERSLNASSKTTAIRFEQTRYIHMRLDSVDDPVINDEIPREEDLNEQHHQADAAN 621
             +E+IE+SL  S+  T   F+   Y  MRLD+VD+P  N+    ++D +E  HQ DA N
Sbjct: 120 TNMEDIEQSLQFSNTGTTTGFQHNAYFTMRLDNVDEPFTNNGAREDQDQSELLHQVDAEN 179

Query: 622 ITLLDPIDSYQ 654
           ITL +  +++Q
Sbjct: 180 ITLFERFETFQ 190


>ref|XP_003616515.1| Sister chromatid cohesion 1 protein [Medicago truncatula]
           gi|355517850|gb|AES99473.1| Sister chromatid cohesion 1
           protein [Medicago truncatula]
          Length = 231

 Score =  224 bits (570), Expect = 1e-56
 Identities = 119/189 (62%), Positives = 140/189 (74%)
 Frame = +1

Query: 82  MFYSHQLLARKAPLGQIWMAATMHAKMNRXXXXXXXXXXXCEEILNPQVPMALRLSGILM 261
           MFYSHQLLARKAPLGQIWMAATMHAK+NR           CEEILNP +PMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRKKLNKLNIIKICEEILNPAIPMALRLSGILM 60

Query: 262 GGVVIVYERKVKLLFDDVSRLLVEINEAWKIKPVNEDPTVLPKAKSQAKFEAVTLPDKNR 441
           GGVVIVYERKVKLL+DDVSRLLVEINEAWK+K V  D T+LPK KSQAK  A+TLP K +
Sbjct: 61  GGVVIVYERKVKLLYDDVSRLLVEINEAWKVKSV-PDHTLLPKGKSQAKRAAITLPGKEQ 119

Query: 442 EIVEEIERSLNASSKTTAIRFEQTRYIHMRLDSVDDPVINDEIPREEDLNEQHHQADAAN 621
             +EE+E S  +++ TT   F +T Y  MRLD++D+  + +E   EED +  HHQA   N
Sbjct: 120 MTLEELELSRQSNATTT---FNRTAYFSMRLDTLDESFLGNEGNVEEDPSVHHHQAAPEN 176

Query: 622 ITLLDPIDS 648
           ITL +P  +
Sbjct: 177 ITLFEPFQA 185


>ref|XP_003616681.1| Double-strand-break repair protein rad21-like protein [Medicago
           truncatula] gi|355518016|gb|AES99639.1|
           Double-strand-break repair protein rad21-like protein
           [Medicago truncatula]
          Length = 605

 Score =  216 bits (550), Expect = 3e-54
 Identities = 119/188 (63%), Positives = 136/188 (72%), Gaps = 5/188 (2%)
 Frame = +1

Query: 82  MFYSHQLLARKAPLGQIW-----MAATMHAKMNRXXXXXXXXXXXCEEILNPQVPMALRL 246
           MFYSHQLLARKAPLGQIW     MAATMHAK+NR           CEEILNP +PMALRL
Sbjct: 1   MFYSHQLLARKAPLGQIWYQRFLMAATMHAKINRKKLNKLNIIKICEEILNPAIPMALRL 60

Query: 247 SGILMGGVVIVYERKVKLLFDDVSRLLVEINEAWKIKPVNEDPTVLPKAKSQAKFEAVTL 426
           SGILMGGVVIVYERKVKLL+DDVSRLLVEINEAWK+K    DPTVLPK KSQAK   +T+
Sbjct: 61  SGILMGGVVIVYERKVKLLYDDVSRLLVEINEAWKVKSA-PDPTVLPKGKSQAKRNEITI 119

Query: 427 PDKNREIVEEIERSLNASSKTTAIRFEQTRYIHMRLDSVDDPVINDEIPREEDLNEQHHQ 606
           P+K R  +EE   +   S+ TTA RF ++ Y  MRLD++D   + +E   EED +  HHQ
Sbjct: 120 PNKERGSIEEDIGNSYQSTATTATRFHRSAYFSMRLDTLD---LGNERIEEEDPSVHHHQ 176

Query: 607 ADAANITL 630
           AD  NITL
Sbjct: 177 ADPDNITL 184


>ref|NP_001056426.1| Os05g0580500 [Oryza sativa Japonica Group]
           gi|34558723|gb|AAQ75095.1| Rad21-4 protein [Oryza sativa
           Japonica Group] gi|113579977|dbj|BAF18340.1|
           Os05g0580500 [Oryza sativa Japonica Group]
          Length = 608

 Score =  209 bits (533), Expect = 3e-52
 Identities = 114/190 (60%), Positives = 136/190 (71%), Gaps = 1/190 (0%)
 Frame = +1

Query: 82  MFYSHQLLARKAPLGQIWMAATMHAKMNRXXXXXXXXXXXCEEILNPQVPMALRLSGILM 261
           MFYSHQLLARKAPLGQIWMAAT+H+K+NR           CEEILNP VPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATLHSKINRKRLDKLDIIKICEEILNPSVPMALRLSGILM 60

Query: 262 GGVVIVYERKVKLLFDDVSRLLVEINEAWKIKPVNEDPTVLPKAKSQAKFEAVTLPDKNR 441
           GGV IVYERKVK L+DDVSR L+EINEAW++KPV  DPTVLPK K+QAK+EAVTLP+   
Sbjct: 61  GGVAIVYERKVKALYDDVSRFLIEINEAWRVKPV-ADPTVLPKGKTQAKYEAVTLPENIM 119

Query: 442 EIVEEIERSLNASSKTTAIRFEQTRYIHMRLDSVDDPVINDEIPREE-DLNEQHHQADAA 618
           ++  ++E+ +  S   T      TR+  MRL+ +DD  IN  +  ++    E HHQADA 
Sbjct: 120 DM--DVEQPMLFSEADT------TRFRGMRLEDLDDQYINVNLDDDDFSRAENHHQADAE 171

Query: 619 NITLLDPIDS 648
           NITL D   S
Sbjct: 172 NITLADNFGS 181