BLASTX nr result

ID: Coptis24_contig00016607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016607
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98632.1| hypothetical protein 111018.19 [Coffea canephora]      120   9e-26
ref|XP_002267318.1| PREDICTED: uncharacterized protein LOC100253...   115   5e-24
emb|CBI17534.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_002327812.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003578003.1| PREDICTED: uncharacterized protein LOC100827...   101   5e-20

>gb|AEI98632.1| hypothetical protein 111018.19 [Coffea canephora]
          Length = 465

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/131 (48%), Positives = 83/131 (63%), Gaps = 6/131 (4%)
 Frame = -3

Query: 375 VNQR-----VVASCVVCWSIVMLIEAGRADRLLRVFDEDSSVEKDMESEWFLVKFINFLW 211
           +NQR     + A+   CW +    + G A+RLL+  +    VEK+M  + F+V+ ++FLW
Sbjct: 8   INQRAKAIALTAAWFFCWILFTASDIGSAERLLKTVEPGHIVEKEMR-QGFIVRLVHFLW 66

Query: 210 LS-RTPYHHVWPELEFGWKLVVGTTIGFXXXXXXXXXXXXXXXXXVPMLTLIIGFDPKSS 34
            S ++ Y HVWPE+EFGWKLVVGT +GF                 VPML+LIIGFDPKSS
Sbjct: 67  QSGKSSYQHVWPEMEFGWKLVVGTVVGFLGAALGSVGGVGGGGIFVPMLSLIIGFDPKSS 126

Query: 33  TAISKCMIMGA 1
           TAISKCMIMGA
Sbjct: 127 TAISKCMIMGA 137


>ref|XP_002267318.1| PREDICTED: uncharacterized protein LOC100253061 [Vitis vinifera]
          Length = 476

 Score =  115 bits (287), Expect = 5e-24
 Identities = 68/139 (48%), Positives = 85/139 (61%), Gaps = 9/139 (6%)
 Frame = -3

Query: 390 MVGVKVNQRVVASC------VVCWSIVMLIEAGRADRLLRVFDEDSS--VEKDMESEWFL 235
           M  + VNQR VA+       VVC  +VM+   G A+RLL+  D  +   V K+ E   FL
Sbjct: 1   MARLGVNQRAVAAVAATSALVVCLGLVMMSGVGNAERLLKADDRPAEHLVNKNKEPG-FL 59

Query: 234 VKFINFLWLS-RTPYHHVWPELEFGWKLVVGTTIGFXXXXXXXXXXXXXXXXXVPMLTLI 58
            K ++FLW S ++ Y HVWP+++FGWKLVV + IGF                 VPMLTLI
Sbjct: 60  SKVVHFLWQSGKSSYQHVWPDMKFGWKLVVASIIGFFGAALGSVGGVGGGGIFVPMLTLI 119

Query: 57  IGFDPKSSTAISKCMIMGA 1
           +GFDPKSSTAISKCMIMGA
Sbjct: 120 VGFDPKSSTAISKCMIMGA 138


>emb|CBI17534.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  115 bits (287), Expect = 5e-24
 Identities = 68/139 (48%), Positives = 85/139 (61%), Gaps = 9/139 (6%)
 Frame = -3

Query: 390 MVGVKVNQRVVASC------VVCWSIVMLIEAGRADRLLRVFDEDSS--VEKDMESEWFL 235
           M  + VNQR VA+       VVC  +VM+   G A+RLL+  D  +   V K+ E   FL
Sbjct: 1   MARLGVNQRAVAAVAATSALVVCLGLVMMSGVGNAERLLKADDRPAEHLVNKNKEPG-FL 59

Query: 234 VKFINFLWLS-RTPYHHVWPELEFGWKLVVGTTIGFXXXXXXXXXXXXXXXXXVPMLTLI 58
            K ++FLW S ++ Y HVWP+++FGWKLVV + IGF                 VPMLTLI
Sbjct: 60  SKVVHFLWQSGKSSYQHVWPDMKFGWKLVVASIIGFFGAALGSVGGVGGGGIFVPMLTLI 119

Query: 57  IGFDPKSSTAISKCMIMGA 1
           +GFDPKSSTAISKCMIMGA
Sbjct: 120 VGFDPKSSTAISKCMIMGA 138


>ref|XP_002327812.1| predicted protein [Populus trichocarpa] gi|222836897|gb|EEE75290.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score =  107 bits (267), Expect = 1e-21
 Identities = 59/136 (43%), Positives = 86/136 (63%), Gaps = 6/136 (4%)
 Frame = -3

Query: 390 MVGVKVNQRVVASCVVCWSIVMLIEA-----GRADRLLRVFDEDSSVEKDMESEWFLVKF 226
           M  +K+NQR +A+  V   ++ L++        A+RLL+  + ++S EK+M S  ++VK 
Sbjct: 1   MAKIKLNQRALATTAVLTCLIFLVQVLMTNMASAERLLKDKEPEASAEKEM-SPGYIVKV 59

Query: 225 INFLWLS-RTPYHHVWPELEFGWKLVVGTTIGFXXXXXXXXXXXXXXXXXVPMLTLIIGF 49
           ++FL+   ++ Y  VWP+++F W++VVGT +GF                 VPMLTLIIGF
Sbjct: 60  LHFLFQGGKSSYEPVWPDMKFDWRIVVGTIVGFLGAALGSVGGVGGGGIFVPMLTLIIGF 119

Query: 48  DPKSSTAISKCMIMGA 1
           DPKSSTAISKCMIMGA
Sbjct: 120 DPKSSTAISKCMIMGA 135


>ref|XP_003578003.1| PREDICTED: uncharacterized protein LOC100827421 [Brachypodium
           distachyon]
          Length = 469

 Score =  101 bits (252), Expect = 5e-20
 Identities = 61/130 (46%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
 Frame = -3

Query: 387 VGVKVNQRVVASCVVCWSIVMLIEAGRADRLLRVFDEDSSVEKDMESEWFLVKFINFLWL 208
           +G ++   + A  V C + V++  A  ADR    F + ++ E   E    L K  NFLW 
Sbjct: 1   MGRRMRHAIAALGVACAAAVVV--AAAADR---GFSQAAATEVQPEEISLLNKIANFLWQ 55

Query: 207 SR-TPYHHVWPELEFGWKLVVGTTIGFXXXXXXXXXXXXXXXXXVPMLTLIIGFDPKSST 31
           S    YHHVWP +EFGWK+V+GT IGF                 VPMLTLIIGFDPKSST
Sbjct: 56  SDGNSYHHVWPPMEFGWKVVLGTLIGFFGASFGSVGGVGGGGIFVPMLTLIIGFDPKSST 115

Query: 30  AISKCMIMGA 1
           AISKCMI GA
Sbjct: 116 AISKCMITGA 125


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