BLASTX nr result

ID: Coptis24_contig00016606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016606
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635462.1| PREDICTED: 15.4 kDa class V heat shock prote...   153   1e-35
ref|XP_002271195.1| PREDICTED: 15.4 kDa class V heat shock prote...   153   2e-35
ref|XP_002317102.1| predicted protein [Populus trichocarpa] gi|2...   138   6e-31
ref|XP_003546144.1| PREDICTED: 15.4 kDa class V heat shock prote...   131   6e-29
gb|ACU19420.1| unknown [Glycine max]                                  122   5e-26

>ref|XP_003635462.1| PREDICTED: 15.4 kDa class V heat shock protein-like [Vitis
           vinifera] gi|296090669|emb|CBI41069.3| unnamed protein
           product [Vitis vinifera]
          Length = 136

 Score =  153 bits (387), Expect = 1e-35
 Identities = 79/136 (58%), Positives = 97/136 (71%), Gaps = 3/136 (2%)
 Frame = -3

Query: 468 MEFSTFQPSPWPFFFNPPLIFSPSISLENYVQWTETQDSHIYKADLPGXXXXXXXXXXED 289
           M+FS FQPS W F F  PL+ S   + +NYV WTET +SHIY A+LPG          ED
Sbjct: 1   MDFSPFQPSSWHFLFTSPLLVSYQFTPDNYVHWTETPESHIYSANLPGVRKEEIRVELED 60

Query: 288 SRYLIIRTETVVESREPAKSFMKKFRLPCLVDIGGISAGFEDGLLTITVPRS---GRFRI 118
           SRYLIIRTE + ES +PAKSFM+KFRLP ++DI GISAG+EDG+LT+TVPRS     F I
Sbjct: 61  SRYLIIRTEAIDESTKPAKSFMRKFRLPDMIDIDGISAGYEDGVLTVTVPRSFVRRGFYI 120

Query: 117 YPAELPDRHEILAPAA 70
            P +LP++ E+LA AA
Sbjct: 121 DPGDLPEQLELLARAA 136


>ref|XP_002271195.1| PREDICTED: 15.4 kDa class V heat shock protein [Vitis vinifera]
           gi|296087002|emb|CBI33266.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  153 bits (386), Expect = 2e-35
 Identities = 79/136 (58%), Positives = 97/136 (71%), Gaps = 3/136 (2%)
 Frame = -3

Query: 468 MEFSTFQPSPWPFFFNPPLIFSPSISLENYVQWTETQDSHIYKADLPGXXXXXXXXXXED 289
           M+FS FQPS W F F  PL+ S   + +NYV WTET +SHIY A+LPG          ED
Sbjct: 1   MDFSPFQPSSWHFLFTSPLLVSYHFTPDNYVHWTETPESHIYSANLPGVRKEEIRVELED 60

Query: 288 SRYLIIRTETVVESREPAKSFMKKFRLPCLVDIGGISAGFEDGLLTITVPRS---GRFRI 118
           SRYLIIRTE + ES +PAKSFM+KFRLP ++DI GISAG+EDG+LT+TVPRS     F I
Sbjct: 61  SRYLIIRTEAIDESTKPAKSFMRKFRLPDMIDIDGISAGYEDGVLTVTVPRSFVRRGFYI 120

Query: 117 YPAELPDRHEILAPAA 70
            P +LP++ E+LA AA
Sbjct: 121 DPGDLPEQLELLARAA 136


>ref|XP_002317102.1| predicted protein [Populus trichocarpa] gi|222860167|gb|EEE97714.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score =  138 bits (347), Expect = 6e-31
 Identities = 76/137 (55%), Positives = 95/137 (69%), Gaps = 4/137 (2%)
 Frame = -3

Query: 468 MEFSTF-QPSPWPFFFNPPLIFSPSISLENYVQWTETQDSHIYKADLPGXXXXXXXXXXE 292
           ME S + QPSPW +    P +FS   + EN+V W+ET +SHIY ADLPG          E
Sbjct: 1   MEQSIYHQPSPWYYLLANPALFSYPPTPENHVNWSETPESHIYSADLPGVRKEEIKLEVE 60

Query: 291 DSRYLIIRTETVVESREPAKSFMKKFRLPCLVDIGGISAGFEDGLLTITVPRSGR---FR 121
           DSRYLIIRTE + ES +PAKSF +KFRLP  +DI GISAGFEDG+LT+TVPR+ R   F 
Sbjct: 61  DSRYLIIRTEAINESTQPAKSFNRKFRLPGGIDIEGISAGFEDGVLTVTVPRAFRRRGFF 120

Query: 120 IYPAELPDRHEILAPAA 70
           I P ++P+R ++LA AA
Sbjct: 121 IDPDDVPERLQVLARAA 137


>ref|XP_003546144.1| PREDICTED: 15.4 kDa class V heat shock protein-like [Glycine max]
          Length = 133

 Score =  131 bits (330), Expect = 6e-29
 Identities = 71/126 (56%), Positives = 86/126 (68%), Gaps = 2/126 (1%)
 Frame = -3

Query: 441 PWPFFFNPPLIFSPSISLENYVQWTETQDSHIYKADLPGXXXXXXXXXXEDSRYLIIRTE 262
           PW +     L+F  +   ENYV WTET DSHI+ AD+PG          EDSRYLIIRT+
Sbjct: 8   PWQYRIPSHLLFPYNSIPENYVHWTETPDSHIFSADIPGVRKEELRVEVEDSRYLIIRTQ 67

Query: 261 TVVESREPAKSFMKKFRLPCLVDIGGISAGFEDGLLTITVPRSGR--FRIYPAELPDRHE 88
            V ES EPA+ F +KFRLP  VD+ GISAG+EDG+LTITVPRS R  F I PA++P+  E
Sbjct: 68  AVDESTEPARKFERKFRLPGRVDLDGISAGYEDGVLTITVPRSLRRGFYIDPADVPENLE 127

Query: 87  ILAPAA 70
           +LA AA
Sbjct: 128 VLARAA 133


>gb|ACU19420.1| unknown [Glycine max]
          Length = 133

 Score =  122 bits (305), Expect = 5e-26
 Identities = 65/125 (52%), Positives = 84/125 (67%), Gaps = 2/125 (1%)
 Frame = -3

Query: 438 WPFFFNPPLIFSPSISLENYVQWTETQDSHIYKADLPGXXXXXXXXXXEDSRYLIIRTET 259
           W +     L+F  +   EN+V WTET DSHI+ AD+PG          EDS+YLIIRT+ 
Sbjct: 9   WQYGIPSHLLFPYNFIPENHVHWTETPDSHIFSADIPGVKKEELRVEVEDSKYLIIRTQA 68

Query: 258 VVESREPAKSFMKKFRLPCLVDIGGISAGFEDGLLTITVPR--SGRFRIYPAELPDRHEI 85
           V +S EPA+ F +KFRLP  VD+ GISAG+EDG+LTITVPR  S  F I P+++P+  E+
Sbjct: 69  VDKSTEPARKFERKFRLPGRVDLDGISAGYEDGVLTITVPRSLSRGFYIDPSDVPENLEV 128

Query: 84  LAPAA 70
           LA AA
Sbjct: 129 LARAA 133


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