BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016596
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat...   132   4e-29
emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]   132   4e-29
ref|XP_002302938.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat...   118   4e-25
ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat...   118   4e-25

>ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera] gi|296087085|emb|CBI33459.3|
           unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  132 bits (331), Expect = 4e-29
 Identities = 68/124 (54%), Positives = 87/124 (70%)
 Frame = -3

Query: 374 LHFSTWFXXXXXXXXXXXTILTTISQAIQNAPTKPLHTSLKKLIPSLKPHHIINLITQXX 195
           L FSTW             ILTTIS+AI+ +PTKPLH+SLK+++PSL P+H+I+LI    
Sbjct: 21  LCFSTWMTPPTSHCHDP--ILTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNP 78

Query: 194 XXXXXXXXXSFFKWISTQQTFRHTIHSYCTMAHFLSSHHMHADAQSLLSYVISRKGKDSA 15
                    SFFKW+STQ  FR +IHSYCTM HFL +H M ++AQSLL +V+SRKGK+SA
Sbjct: 79  HSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSA 138

Query: 14  SSIF 3
           SS+F
Sbjct: 139 SSVF 142


>emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  132 bits (331), Expect = 4e-29
 Identities = 68/124 (54%), Positives = 87/124 (70%)
 Frame = -3

Query: 374 LHFSTWFXXXXXXXXXXXTILTTISQAIQNAPTKPLHTSLKKLIPSLKPHHIINLITQXX 195
           L FSTW             ILTTIS+AI+ +PTKPLH+SLK+++PSL P+H+I+LI    
Sbjct: 21  LCFSTWMTPPTSHCHDP--ILTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNP 78

Query: 194 XXXXXXXXXSFFKWISTQQTFRHTIHSYCTMAHFLSSHHMHADAQSLLSYVISRKGKDSA 15
                    SFFKW+STQ  FR +IHSYCTM HFL +H M ++AQSLL +V+SRKGK+SA
Sbjct: 79  HSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSA 138

Query: 14  SSIF 3
           SS+F
Sbjct: 139 SSVF 142


>ref|XP_002302938.1| predicted protein [Populus trichocarpa] gi|222844664|gb|EEE82211.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/105 (54%), Positives = 74/105 (70%)
 Frame = -3

Query: 317 ILTTISQAIQNAPTKPLHTSLKKLIPSLKPHHIINLITQXXXXXXXXXXXSFFKWISTQQ 138
           ILTTIS+AI+N  TKPLH SLK ++PS K HH I+L+ Q           SFF ++S+  
Sbjct: 45  ILTTISEAIKNIETKPLHISLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSYP 104

Query: 137 TFRHTIHSYCTMAHFLSSHHMHADAQSLLSYVISRKGKDSASSIF 3
           TF HT+ SYC+M HFL +H M+  A+SLL +V+SRKGK SASS+F
Sbjct: 105 TFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVF 149


>ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/105 (52%), Positives = 74/105 (70%)
 Frame = -3

Query: 317 ILTTISQAIQNAPTKPLHTSLKKLIPSLKPHHIINLITQXXXXXXXXXXXSFFKWISTQQ 138
           +L  +S AI NA TKPL +SL++L+PS KPHH I+LI Q           SFF W+S+  
Sbjct: 36  VLAAVSTAINNAQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIP 95

Query: 137 TFRHTIHSYCTMAHFLSSHHMHADAQSLLSYVISRKGKDSASSIF 3
           TFRHT  SYC MA+FLS+H M  + QS++ +++SRKGKDSA+S+F
Sbjct: 96  TFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVF 140


>ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/105 (52%), Positives = 74/105 (70%)
 Frame = -3

Query: 317 ILTTISQAIQNAPTKPLHTSLKKLIPSLKPHHIINLITQXXXXXXXXXXXSFFKWISTQQ 138
           +L  +S AI NA TKPL +SL++L+PS KPHH I+LI Q           SFF W+S+  
Sbjct: 36  VLAAVSTAINNAQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIP 95

Query: 137 TFRHTIHSYCTMAHFLSSHHMHADAQSLLSYVISRKGKDSASSIF 3
           TFRHT  SYC MA+FLS+H M  + QS++ +++SRKGKDSA+S+F
Sbjct: 96  TFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVF 140