BLASTX nr result

ID: Coptis24_contig00016590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016590
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD46029.1|AC007519_14 F16N3.14 [Arabidopsis thaliana]             157   8e-37
ref|NP_001185164.1| biotin/lipoate A/B protein ligase family pro...   157   8e-37
ref|XP_002869348.1| lipoyltransferase [Arabidopsis lyrata subsp....   154   9e-36
ref|XP_002272498.1| PREDICTED: biotin/lipoate A/B protein ligase...   152   3e-35
ref|NP_567866.1| Plastidial lipoyltransferase 2 [Arabidopsis tha...   152   4e-35

>gb|AAD46029.1|AC007519_14 F16N3.14 [Arabidopsis thaliana]
          Length = 571

 Score =  157 bits (397), Expect = 8e-37
 Identities = 69/114 (60%), Positives = 90/114 (78%)
 Frame = +3

Query: 75  SRAHKTISNPSQATTRKCEYFDLHKEVIPYNKAWEWQKSIVKQRQCLIDLDQDCSDTLII 254
           S + K +++ +    RKCE FDL+ ++IPY KAW WQKSI+ +++ LID +Q+CSD+LII
Sbjct: 30  STSLKIMNSKNHTNPRKCECFDLYDQLIPYKKAWSWQKSILNEKKALIDKNQECSDSLII 89

Query: 255 LQHPPVYTLGAASSEEFLKFDRNNTCYDVYKTERGGEVTYHGPGQIVMYPIVNL 416
           LQHP VYT+G  SSE +L FD  N  +DVY+TERGGEVTYHGPGQ+VMYPI+NL
Sbjct: 90  LQHPSVYTMGTGSSENYLNFDIKNAPFDVYRTERGGEVTYHGPGQLVMYPIINL 143


>ref|NP_001185164.1| biotin/lipoate A/B protein ligase family protein [Arabidopsis
           thaliana] gi|193806055|sp|P0C7R2.1|LIPBL_ARATH RecName:
           Full=Putative lipoyltransferase-like protein,
           chloroplastic; AltName: Full=Lipoate-protein ligase-like
           protein; AltName:
           Full=Lipoyl-[acyl-carrier-protein]-protein-N-
           lipoyltransferase-like protein; Flags: Precursor
           gi|332194068|gb|AEE32189.1| biotin/lipoate A/B protein
           ligase family protein [Arabidopsis thaliana]
          Length = 280

 Score =  157 bits (397), Expect = 8e-37
 Identities = 69/114 (60%), Positives = 90/114 (78%)
 Frame = +3

Query: 75  SRAHKTISNPSQATTRKCEYFDLHKEVIPYNKAWEWQKSIVKQRQCLIDLDQDCSDTLII 254
           S + K +++ +    RKCE FDL+ ++IPY KAW WQKSI+ +++ LID +Q+CSD+LII
Sbjct: 30  STSLKIMNSKNHTNPRKCECFDLYDQLIPYKKAWSWQKSILNEKKALIDKNQECSDSLII 89

Query: 255 LQHPPVYTLGAASSEEFLKFDRNNTCYDVYKTERGGEVTYHGPGQIVMYPIVNL 416
           LQHP VYT+G  SSE +L FD  N  +DVY+TERGGEVTYHGPGQ+VMYPI+NL
Sbjct: 90  LQHPSVYTMGTGSSENYLNFDIKNAPFDVYRTERGGEVTYHGPGQLVMYPIINL 143


>ref|XP_002869348.1| lipoyltransferase [Arabidopsis lyrata subsp. lyrata]
           gi|297315184|gb|EFH45607.1| lipoyltransferase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 288

 Score =  154 bits (388), Expect = 9e-36
 Identities = 65/114 (57%), Positives = 92/114 (80%)
 Frame = +3

Query: 75  SRAHKTISNPSQATTRKCEYFDLHKEVIPYNKAWEWQKSIVKQRQCLIDLDQDCSDTLII 254
           +R+ K +++ +    RKC+ FDL+ +++PY  AW WQKSIV++++ LID +QDC DT+I+
Sbjct: 28  ARSVKILNSGNHQIPRKCQCFDLYDQLVPYKNAWSWQKSIVEEKKTLIDRNQDCPDTVIL 87

Query: 255 LQHPPVYTLGAASSEEFLKFDRNNTCYDVYKTERGGEVTYHGPGQIVMYPIVNL 416
           LQH PVYT+G AS+E++L FD  +  +DVY+TERGGEVTYHGPGQ+VMYPI+NL
Sbjct: 88  LQHSPVYTMGTASTEDYLNFDIKDAPFDVYRTERGGEVTYHGPGQLVMYPIINL 141


>ref|XP_002272498.1| PREDICTED: biotin/lipoate A/B protein ligase family-like [Vitis
           vinifera] gi|296086674|emb|CBI32309.3| unnamed protein
           product [Vitis vinifera]
          Length = 290

 Score =  152 bits (384), Expect = 3e-35
 Identities = 72/129 (55%), Positives = 92/129 (71%), Gaps = 10/129 (7%)
 Frame = +3

Query: 60  TSPPNSRAHKTISNPSQATT----------RKCEYFDLHKEVIPYNKAWEWQKSIVKQRQ 209
           T P     +  +S  SQA+           R CE FDL+ E++PY +AW WQKSIVK+++
Sbjct: 19  TRPYTPHLNAVLSKLSQASQFSISVTYKEKRLCECFDLYNELVPYGEAWSWQKSIVKEKK 78

Query: 210 CLIDLDQDCSDTLIILQHPPVYTLGAASSEEFLKFDRNNTCYDVYKTERGGEVTYHGPGQ 389
            LI  +Q+CSD LIILQHPPV+TLG  SSEE++ F+  +  YDVY+TERGGEVTYHGPGQ
Sbjct: 79  ALIQRNQNCSDALIILQHPPVFTLGTGSSEEYMNFEIIDAPYDVYRTERGGEVTYHGPGQ 138

Query: 390 IVMYPIVNL 416
           +VMYPI+NL
Sbjct: 139 LVMYPIINL 147


>ref|NP_567866.1| Plastidial lipoyltransferase 2 [Arabidopsis thaliana]
           gi|75164691|sp|Q948J9.1|LIP2P_ARATH RecName:
           Full=Plastidial lipoyltransferase 2; AltName:
           Full=Lipoate-protein ligase 2p; AltName:
           Full=Lipoyl-[acyl-carrier-protein]-protein-N-
           lipoyltransferase 2p gi|15887052|dbj|BAB69449.1|
           lipoyltransferase [Arabidopsis thaliana]
           gi|62320326|dbj|BAD94675.1| putative protein
           [Arabidopsis thaliana] gi|90186250|gb|ABD91501.1|
           At4g31050 [Arabidopsis thaliana]
           gi|332660451|gb|AEE85851.1| Plastidial lipoyltransferase
           2 [Arabidopsis thaliana]
          Length = 278

 Score =  152 bits (383), Expect = 4e-35
 Identities = 65/113 (57%), Positives = 92/113 (81%)
 Frame = +3

Query: 78  RAHKTISNPSQATTRKCEYFDLHKEVIPYNKAWEWQKSIVKQRQCLIDLDQDCSDTLIIL 257
           R+ K +++ +    RKC  FDL+ +++PY KAW WQKSIV++++ LID +QDC+DT+I+L
Sbjct: 29  RSVKILNSGNHEIPRKCLCFDLYDKLVPYKKAWSWQKSIVEEKKTLIDRNQDCADTVILL 88

Query: 258 QHPPVYTLGAASSEEFLKFDRNNTCYDVYKTERGGEVTYHGPGQIVMYPIVNL 416
           QH PVYT+G AS+E++L FD  +  ++VY+TERGGEVTYHGPGQ+VMYPI+NL
Sbjct: 89  QHSPVYTMGTASTEDYLNFDIKDAPFNVYRTERGGEVTYHGPGQLVMYPIINL 141


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