BLASTX nr result

ID: Coptis24_contig00016583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016583
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635461.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spi...   104   2e-20
ref|XP_003610414.1| Abnormal spindle-like microcephaly-associate...   102   7e-20
emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]   102   1e-19
ref|XP_004153514.1| PREDICTED: abnormal spindle-like microcephal...    88   2e-15
ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephal...    88   2e-15

>ref|XP_003635461.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spindle-like
            microcephaly-associated protein homolog, partial [Vitis
            vinifera]
          Length = 1022

 Score =  104 bits (260), Expect = 2e-20
 Identities = 72/227 (31%), Positives = 111/227 (48%), Gaps = 28/227 (12%)
 Frame = +2

Query: 14   SKFIVLELSS-EYQDHDTCGRHLRFMVQRHSFVLLRKSVLLIQRAARTWITRRRHSEPKS 190
            S  IV + SS   +  +T GR++ FMV RH FV L+ S LLIQ+A R WI+R+ H    +
Sbjct: 796  SPIIVQKYSSGRLKQLETFGRYIIFMVDRHGFVKLKSSTLLIQKAVRRWISRKHHRIKAA 855

Query: 191  SLESLALSVQTAAMSRYHDMLDQLQESGLIHGEMVINN------RITTIFTYVLAWTRWR 352
                LA    +   S  ++     Q     HG ++  +       +  I ++   W   +
Sbjct: 856  VKIQLAWRNFSVCNSHRNEYTAATQIQCCFHGWLLRRSFVQKKQAVINIQSHFRGWLLRK 915

Query: 353  NFI---------------------IRKCIAAIKIQSHWRAWLTRRNFLHQKKAVLVVQSA 469
            +F+                     ++K  AAIK+QS +R W  RR+F+ +++A + +QS 
Sbjct: 916  SFVKKKQTVRKIQGAFRGWLLRNLVKKQQAAIKLQSAFRGWSLRRSFVKKQQAAIKIQSD 975

Query: 470  IRSFKCWTNLQQCRTETKSAIIIQSRFRGLLCRREANRRRGPIILIQ 610
             R  KC  N Q  +  TKSAII+QS  RG + R+   R R  I++IQ
Sbjct: 976  FRGLKCQRNFQIYKIATKSAIIMQSHLRGWIARKAVCRLRHQIVVIQ 1022


>ref|XP_003610414.1| Abnormal spindle-like microcephaly-associated protein-like protein
            [Medicago truncatula] gi|355511469|gb|AES92611.1|
            Abnormal spindle-like microcephaly-associated
            protein-like protein [Medicago truncatula]
          Length = 1503

 Score =  102 bits (254), Expect = 7e-20
 Identities = 71/228 (31%), Positives = 118/228 (51%), Gaps = 17/228 (7%)
 Frame = +2

Query: 71   RHLRFMVQRHSFVLLRKSVLLIQRAARTWITRRRHSEPKS------SLESLALSVQT--- 223
            +++    QRHSF+ L++S  LIQ+A R+W   R     +S         + A S+Q    
Sbjct: 841  KYVMLFYQRHSFLRLKRSAQLIQQAVRSWFYWRARQGCRSPDLLTADTVNAATSIQKFLR 900

Query: 224  --AAMSRYHDMLDQLQES-GLIHGEMVINNRITTIFTYVLAWTRWRNFIIRKC-----IA 379
               A SRY  +LDQ +++  L   +++ + +        +AW   +N+I  K      + 
Sbjct: 901  GWMARSRYIYLLDQKEKTLHLAEQKLIFDLKTKAAIGIQVAW---KNYIRCKSTRKEHLF 957

Query: 380  AIKIQSHWRAWLTRRNFLHQKKAVLVVQSAIRSFKCWTNLQQCRTETKSAIIIQSRFRGL 559
            A KIQ ++R WL R+ F++Q +AV+ +QS  R ++C   +Q  +T +K+AI+IQS FRG 
Sbjct: 958  ATKIQCNFRRWLLRKRFINQIQAVIKIQSYFRMWRCVIAIQNFKTMSKAAIVIQSFFRGW 1017

Query: 560  LCRREANRRRGPIILIQSYXXXXXXXXXXXXXXEAAISIQSGFRCLRC 703
            + R+ A  R+  I+ IQ +              +A + IQS  R L+C
Sbjct: 1018 IARKNACARKNQIVEIQRHCRGWLVKRNFLFQRDAIVKIQSVSRSLKC 1065


>emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]
          Length = 1251

 Score =  102 bits (253), Expect = 1e-19
 Identities = 83/298 (27%), Positives = 126/298 (42%), Gaps = 83/298 (27%)
 Frame = +2

Query: 59   DTCGRHLRFMVQRHSFVLLRKSVLLIQRAARTWITRRRH---------SEP---KSSLES 202
            +T GR++ FMV RH FV L+ S LLIQ+A R WI+R+           S P   K++   
Sbjct: 774  ETFGRYIIFMVDRHGFVKLKSSTLLIQKAVRRWISRKHQGRNMLAQDPSSPDPVKAASFD 833

Query: 203  LALSVQTAAMSRYHDMLDQLQESGLIHGEMVINN-RITTIFTYVLAWTRW---------- 349
               + +  +  +Y   L Q+++S  I  E  +N+ RI       LAW  +          
Sbjct: 834  RRCTYEWTSRPKYTCTLSQMEKSSFIFQEKEMNDLRIKAAVKIQLAWRNFSVCNSHRNEY 893

Query: 350  ---------------RNFIIRKCIAAIKIQSHWRAWLTRRNFLHQKKAVLVVQSAIR--- 475
                           R   ++K  A I IQSH+R WL R++F+ +K+ V  +Q A R   
Sbjct: 894  TAATQIQCCFRGWLLRRSFVQKKQAVINIQSHFRGWLLRKSFVKKKQTVRKIQGAFRGWL 953

Query: 476  ----------------SFKCWT--------------------------NLQQCRTETKSA 529
                            +F+ W+                          N Q  +  TKSA
Sbjct: 954  LRNLVKKQQAAIKLQSAFRGWSLRRSFVKKQQAAIKIQSDFRGLKCQRNFQIYKIATKSA 1013

Query: 530  IIIQSRFRGLLCRREANRRRGPIILIQSYXXXXXXXXXXXXXXEAAISIQSGFRCLRC 703
            II+QS  RG + R+   R R  I++IQS+              +A I IQ+ F+C++C
Sbjct: 1014 IIMQSHLRGWIARKAVCRLRHQIVVIQSHCRGWLTRRDLLLXRKAVIKIQNAFQCVKC 1071



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 12/177 (6%)
 Frame = +2

Query: 74   HLRFMVQRHSFVLLRKSVLLIQRAARTWITRRRHSEPKSSLESLALSVQTAAMSRYHDML 253
            H R  + R SFV  +++V  IQ A R W+ R    + +++++   L       S     +
Sbjct: 925  HFRGWLLRKSFVKKKQTVRKIQGAFRGWLLRNLVKKQQAAIK---LQSAFRGWSLRRSFV 981

Query: 254  DQLQESGLIHGEM-----VINNRITTIFTY--VLAWTRWRNFIIRKCIAAIK-----IQS 397
             + Q +  I  +        N +I  I T   ++  +  R +I RK +  ++     IQS
Sbjct: 982  KKQQAAIKIQSDFRGLKCQRNFQIYKIATKSAIIMQSHLRGWIARKAVCRLRHQIVVIQS 1041

Query: 398  HWRAWLTRRNFLHQKKAVLVVQSAIRSFKCWTNLQQCRTETKSAIIIQSRFRGLLCR 568
            H R WLTRR+ L  +KAV+ +Q+A +  KCW   Q  R    +AI IQ   RG + R
Sbjct: 1042 HCRGWLTRRDLLLXRKAVIKIQNAFQCVKCWKAFQCYR---YAAIDIQRFVRGXITR 1095


>ref|XP_004153514.1| PREDICTED: abnormal spindle-like microcephaly-associated protein
           homolog, partial [Cucumis sativus]
          Length = 731

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 9/219 (4%)
 Frame = +2

Query: 68  GRHLRFMVQRHSFVLLRKSVLLIQRAARTWITRRRHSEPKSSLESLALSVQTAAMSRYHD 247
           GR+    V     + L++S + IQRA R W+ R+             +S + A+  R   
Sbjct: 195 GRYSTLTVDTRDLLTLQRSAICIQRATRNWMIRKNQ-----------VSREVASFDRNGP 243

Query: 248 MLDQLQESGLIHGEMVINNRITTIFTYVLAWTRW----RNFIIRKC-----IAAIKIQSH 400
            +  L  + +   E+ I +RI     + +         ++ ++R+      +AAI+IQS+
Sbjct: 244 AVTHLNIASIADEEIGIIDRIKETPEFQVVAEECPILNKDVVVREAFCNEHLAAIQIQSY 303

Query: 401 WRAWLTRRNFLHQKKAVLVVQSAIRSFKCWTNLQQCRTETKSAIIIQSRFRGLLCRREAN 580
           +R    RR FL  + A +V+Q  IR  +C       +    SAI+IQS  RG + RRE +
Sbjct: 304 FRGKFLRRKFLSLRMATIVIQKNIRMLRCQKEYTHNKNVVTSAIVIQSLVRGWIARREGH 363

Query: 581 RRRGPIILIQSYXXXXXXXXXXXXXXEAAISIQSGFRCL 697
           R+R  I+L+QS+              E+ I IQ+  RC+
Sbjct: 364 RQRRLIVLVQSFWRRWLAQKEFLLQRESVIKIQTATRCM 402


>ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephaly-associated protein
            homolog [Cucumis sativus]
          Length = 1368

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 9/219 (4%)
 Frame = +2

Query: 68   GRHLRFMVQRHSFVLLRKSVLLIQRAARTWITRRRHSEPKSSLESLALSVQTAAMSRYHD 247
            GR+    V     + L++S + IQRA R W+ R+             +S + A+  R   
Sbjct: 832  GRYSTLTVDTRDLLTLQRSAICIQRATRNWMIRKNQ-----------VSREVASFDRNGP 880

Query: 248  MLDQLQESGLIHGEMVINNRITTIFTYVLAWTRW----RNFIIRKC-----IAAIKIQSH 400
             +  L  + +   E+ I +RI     + +         ++ ++R+      +AAI+IQS+
Sbjct: 881  AVTHLNIASIADEEIGIIDRIKETPEFQVVAEECPILNKDVVVREAFCNEHLAAIQIQSY 940

Query: 401  WRAWLTRRNFLHQKKAVLVVQSAIRSFKCWTNLQQCRTETKSAIIIQSRFRGLLCRREAN 580
            +R    RR FL  + A +V+Q  IR  +C       +    SAI+IQS  RG + RRE +
Sbjct: 941  FRGKFLRRKFLSLRMATIVIQKNIRMLRCQKEYTHNKNVVTSAIVIQSLVRGWIARREGH 1000

Query: 581  RRRGPIILIQSYXXXXXXXXXXXXXXEAAISIQSGFRCL 697
            R+R  I+L+QS+              E+ I IQ+  RC+
Sbjct: 1001 RQRRLIVLVQSFWRRWLAQKEFLLQRESVIKIQTATRCM 1039


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