BLASTX nr result

ID: Coptis24_contig00016580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016580
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283770.1| PREDICTED: uncharacterized protein LOC100243...    88   1e-15
ref|XP_002306529.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-12
ref|XP_002301125.1| predicted protein [Populus trichocarpa] gi|2...    73   5e-11
ref|XP_002514052.1| conserved hypothetical protein [Ricinus comm...    61   2e-07
gb|AAS80151.1| ACT11D09.5 [Cucumis melo]                               60   4e-07

>ref|XP_002283770.1| PREDICTED: uncharacterized protein LOC100243767 [Vitis vinifera]
           gi|302142075|emb|CBI19278.3| unnamed protein product
           [Vitis vinifera]
          Length = 347

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 68/194 (35%), Positives = 82/194 (42%), Gaps = 25/194 (12%)
 Frame = +2

Query: 119 MEESENRKEXXXXXXXXXXXXXXXXP---STIPTNLFNPLAETSTTNMPGPQPPA---RF 280
           MEESE R+E                    S +P  L NPL E S T +P  +      RF
Sbjct: 1   MEESEKRRERLKAMRMEAAQTKVSDTVDTSAMPGYLSNPLVEGSAT-LPVQEDSCVTPRF 59

Query: 281 DFYTDPMAAFSGNRTKSQ------------------KXXXXXXXXXXXXXXRNLDTTP-P 403
           DFYTDPM+AFS N+ +S+                                 RN + TP P
Sbjct: 60  DFYTDPMSAFSSNKRRSKVGNQIQQDYLTPSSNSGYTATMARMSSSLSAGPRNCEMTPSP 119

Query: 404 THQFNQSYSSNQRTYEAPFPYSNPGPWRSPIGMARPFPQQLGTPPAVWNRPGDTGGCSFL 583
              F  ++S  Q   +A   Y + GP+RSPI MA PFP   GT P VWN           
Sbjct: 120 NPPFQPNFSPGQGINQAQGLYHSSGPYRSPIEMASPFPAHQGT-PGVWNGSNGMPRYGVP 178

Query: 584 PNSPIGGGFPSPDF 625
            NSP GG FPSP F
Sbjct: 179 SNSPRGGNFPSPGF 192


>ref|XP_002306529.1| predicted protein [Populus trichocarpa] gi|222855978|gb|EEE93525.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 61/197 (30%), Positives = 74/197 (37%), Gaps = 30/197 (15%)
 Frame = +2

Query: 119 MEESENRKEXXXXXXXXXXXXXXXX----PSTIPTNLFNPLAETSTTNMPGPQPPA--RF 280
           ME+SE R+E                     S  P  L  PL  T  T +   +  A  RF
Sbjct: 1   MEDSEKRRERLKAMRSIAAAQAETSNNVETSAPPGLLAYPLLGTPATLLAQGESSAIPRF 60

Query: 281 DFYTDPMAAFSGNR-------------TKSQKXXXXXXXXXXXXXXRNLDTTPP------ 403
           DFYTDP AAFS NR             T                  RNL+ TPP      
Sbjct: 61  DFYTDPSAAFSANRKGAAGNQAARGYFTSPSNNSSVPQLSSPHPGQRNLEVTPPHAYQMQ 120

Query: 404 -----THQFNQSYSSNQRTYEAPFPYSNPGPWRSPIGMARPFPQQLGTPPAVWNRPGDTG 568
                 +Q   ++  NQR Y    PY N   +RSP G   PFP   G PP +W+ PG   
Sbjct: 121 NSYPHANQMQSNHLPNQRMYRGQGPYHNAASYRSPRGFLCPFPMNQGAPPEMWSGPGFPA 180

Query: 569 GCSFLPNSPIGGGFPSP 619
                 +S + GG  SP
Sbjct: 181 SYF---SSTVHGGLSSP 194


>ref|XP_002301125.1| predicted protein [Populus trichocarpa] gi|222842851|gb|EEE80398.1|
           predicted protein [Populus trichocarpa]
          Length = 347

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 59/180 (32%), Positives = 72/180 (40%), Gaps = 31/180 (17%)
 Frame = +2

Query: 197 STIPTNLFNPLAETSTTNMPGPQPPA--RFDFYTDPMAAFSGNRTKS------------- 331
           S +P  L NPL E   T     +  A  RFDFYTDP AAFS +R ++             
Sbjct: 32  SAVPGLLANPLLENPATQPALEELSATPRFDFYTDPSAAFSSDRKRTATANQVARGFRPP 91

Query: 332 QKXXXXXXXXXXXXXXRNLDTTP-----------PTHQFNQSYSSNQRTYEAPFPYSNPG 478
                           RN + TP           P +Q   +YS NQR Y    PY N  
Sbjct: 92  NNISSMPQFSSPHPGQRNPEVTPSSAYQMQNNYSPANQMQSNYSPNQRMYPGQGPYHNAA 151

Query: 479 PWRSPIGMARPFPQQLGTPPAVWNRP-GDTGGCSFLPNSPIGGGFP----SPDFGQRDSS 643
            +R+P   ARPF    GT P +WN P G     S  P   I   +P    +P FG   SS
Sbjct: 152 FYRTPSNFARPFTMNQGT-PEMWNGPGGPASNHSSTPYRGISRPYPIHQGNPGFGPVGSS 210


>ref|XP_002514052.1| conserved hypothetical protein [Ricinus communis]
           gi|223547138|gb|EEF48635.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 412

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 48/137 (35%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
 Frame = +2

Query: 197 STIPTNLFNPLAETSTTNMPGPQPPA--RFDFYTDPMAAFSGNRTKSQ------------ 334
           S +   L NPL E+  T     +  A  RFDFYT+PMAAFS ++  +             
Sbjct: 108 SAVSGFLTNPLLESPATFPAKEESSATPRFDFYTNPMAAFSADKRIASINQPAPRYFIPP 167

Query: 335 -KXXXXXXXXXXXXXXRNLDTTP-PTHQFNQSYSSNQRTYEAPFPYSNPGPWRSPIGMAR 508
                            N   TP P +Q   +Y  NQRT++   PY++  P+RSP   A 
Sbjct: 168 SNNGPMPWFSSPVPGPGNPGMTPSPVYQMQSNYLPNQRTHQQG-PYNSAVPYRSP--RAG 224

Query: 509 PFPQQLGTPPAVWNRPG 559
           PFP   GTP A WN PG
Sbjct: 225 PFPMHQGTPDA-WNGPG 240


>gb|AAS80151.1| ACT11D09.5 [Cucumis melo]
          Length = 568

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 61/191 (31%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
 Frame = +2

Query: 197 STIPTNLFNPLAETSTTNMPGPQPPA---RFDFYTDPMAAFSGNRTKSQKXXXXXXXXXX 367
           +++P +L NPL E+S T M G   P    RFD+YT+PMAAFS ++ K +           
Sbjct: 262 TSLPNHLSNPLVESSAT-MVGQLAPCTAPRFDYYTNPMAAFSTSKKKGKIENQPVSDTFV 320

Query: 368 XXXXRNLDTT--PP--------------THQFNQSYSSNQRTYEA--------------P 457
                   TT  PP              THQF+Q YS +QRT+ A              P
Sbjct: 321 PYHHNTSSTTYLPPTFPGLRNPEMSPSSTHQFHQ-YSPDQRTFYARGDSEAGGHGSPGMP 379

Query: 458 FPYS----NPGPWRSPIGMARPFPQQLGT-PPAVWNRPGDTGGCSFLPNSPIGGGF--PS 616
            PY+    +P  WR P    RPF  Q  T PP   N      G       P G  +  P+
Sbjct: 380 RPYAVNQGDPHMWRGP---RRPFVNQFPTHPPREMNSSSHVSG-------PRGNSYTNPT 429

Query: 617 PDFGQRDSSNP 649
            D  +  SS+P
Sbjct: 430 QDRAKYRSSSP 440


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