BLASTX nr result

ID: Coptis24_contig00016571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016571
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   101   1e-24
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-22
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-21
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-21
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    88   3e-15

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  101 bits (251), Expect(2) = 1e-24
 Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 1/197 (0%)
 Frame = -3

Query: 923 LKKRFPQALTYNSIGNQGCKLLGFIENGRWNIPNRIRIHTTDIFTRMEEEVSIISGE-DM 747
           L   + +   Y+S   +  K+   I+N  W  P    I    I   +    +   G+ D 
Sbjct: 254 LADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDE 313

Query: 746 IVWSASNRGGFTLKDMYHSIRNTKQPVEWHSLVWFSNKIPRHSFITWMVMQTCLKTLCRM 567
           +VW  S    F++K  +  +R  +Q VEWH +VWF N +PRHSF+ WM +Q  L T  ++
Sbjct: 314 LVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKL 373

Query: 566 KKRKVVTDDTCIF*WREVEIEEHLFFNCTFAQEVWSKLLNECGYSRIRAINWEEEVKWVI 387
            +  +   + C    R  E   HLFF C++ + +W  + + C   R+    W+E ++W  
Sbjct: 374 HRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTK-GWDEWIRWAT 432

Query: 386 LVIAGKGCKQDEFKLVF 336
           +   GK       KL F
Sbjct: 433 VSWHGKSFVNFSCKLSF 449



 Score = 39.3 bits (90), Expect(2) = 1e-24
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -1

Query: 1021 TLWVQWVYKNLIKEKNFWSMKIANDCSW 938
            ++W  W+  NL++ +NFW++K   +CSW
Sbjct: 188  SIWSTWIRSNLLRGRNFWTIKTPQNCSW 215


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  100 bits (248), Expect(2) = 9e-22
 Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
 Frame = -3

Query: 923  LKKRFPQALTYNSIGNQGCKLLGFIENGRWNIPNRIRIHTTDIFTRMEEEVSIISGE-DM 747
            L   + +   Y+S   +  K+   I+N  W  P    I    I   +    +   G+ D 
Sbjct: 1127 LADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDE 1186

Query: 746  IVWSASNRGGFTLKDMYHSIRNTKQPVEWHSLVWFSNKIPRHSFITWMVMQTCLKTLCRM 567
            IVW  S    F +K  +  +R  +Q VEWH +VWF N +PRHSF+ WM +Q  L T  ++
Sbjct: 1187 IVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKL 1246

Query: 566  KKRKVVTDDTCIF*WREVEIEEHLFFNCTFAQEVWSKLLNECGYSRIRAINWEEEVKWVI 387
             +  +   + C    R  E   HLFF C++ + +W  + + C   R+    W+E ++W  
Sbjct: 1247 YRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTK-GWDEWIRWAT 1305

Query: 386  LVIAGKGCKQDEFKLVF 336
            +   GK       KL F
Sbjct: 1306 VSWHGKSFVNFSRKLSF 1322



 Score = 30.4 bits (67), Expect(2) = 9e-22
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -1

Query: 994  NLIKEKNFWSMKIANDCSW 938
            NL++ +NFW++K   +CSW
Sbjct: 1070 NLLRGRNFWTIKTPQNCSW 1088


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score =  102 bits (253), Expect(2) = 4e-21
 Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
 Frame = -3

Query: 923  LKKRFPQALTYNSIGNQGCKLLGFIENGRWNIPNRIRIHTTDIFTRMEEEVSIISGE-DM 747
            L   + +   Y+S   +  K+   I+N  W  P    I    I   +    +   G+ D 
Sbjct: 787  LADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDE 846

Query: 746  IVWSASNRGGFTLKDMYHSIRNTKQPVEWHSLVWFSNKIPRHSFITWMVMQTCLKTLCRM 567
            I+W  S    F++K  +  +R  +Q VEWH +VWF N +PRHSF+ WMV+Q  L T  ++
Sbjct: 847  IIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKL 906

Query: 566  KKRKVVTDDTCIF*WREVEIEEHLFFNCTFAQEVWSKLLNECGYSRIRAINWEEEVKWVI 387
             +  +   + C    R  E   HLFF C++ + +W  + + C   R+    W+E ++W  
Sbjct: 907  HRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTK-GWDEWIRWAT 965

Query: 386  LVIAGKGCKQDEFKLVF 336
            +   GK       KL F
Sbjct: 966  VSWHGKSFINFSRKLSF 982



 Score = 26.2 bits (56), Expect(2) = 4e-21
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 994 NLIKEKNFWSMKIANDCS 941
           NL++ +NFW++K   +CS
Sbjct: 730 NLLRGRNFWTIKTPQNCS 747


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  101 bits (251), Expect(2) = 6e-21
 Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 1/197 (0%)
 Frame = -3

Query: 923 LKKRFPQALTYNSIGNQGCKLLGFIENGRWNIPNRIRIHTTDIFTRMEEEVSIISGE-DM 747
           L   + +   Y+S   +  K+   I+N  W  P    I    I   +    +   G+ D 
Sbjct: 72  LADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDE 131

Query: 746 IVWSASNRGGFTLKDMYHSIRNTKQPVEWHSLVWFSNKIPRHSFITWMVMQTCLKTLCRM 567
           IVW  S    F++K  +  +R  +  VEWH +VWF N +PRHSF+ WMV+Q  L T  ++
Sbjct: 132 IVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKL 191

Query: 566 KKRKVVTDDTCIF*WREVEIEEHLFFNCTFAQEVWSKLLNECGYSRIRAINWEEEVKWVI 387
            +  +   + C    R  E   HLFF C++ + +W  + + C   R+    W+E ++W  
Sbjct: 192 HRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTK-GWDEWIRWAT 250

Query: 386 LVIAGKGCKQDEFKLVF 336
           +   GK       KL F
Sbjct: 251 VSWHGKSFVNFSRKLSF 267



 Score = 26.6 bits (57), Expect(2) = 6e-21
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 991 LIKEKNFWSMKIANDCSW 938
           ++  +NFW++K   +CSW
Sbjct: 16  IVISRNFWTIKTPQNCSW 33


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 22/186 (11%)
 Frame = -3

Query: 890 NSIGNQGCKLLGFIENGR----WNIPNRIRIHTTDIFTRMEEEVSII-----SGEDMIVW 738
           +S G++G   LG  ++      W    R R H T+   R+EE + +        ED  +W
Sbjct: 218 DSAGDRGAIDLGINKHATVVEAWGNRRRRR-HRTNFLNRVEERLILSWNSRNQAEDRALW 276

Query: 737 SASN---RGGFTLKDMYHSIRNTKQPVEWHSLVWFSNKIPRHSFITWMVMQTCLKTLCRM 567
                  R  F+ KD ++ IR     V W+  VWF+  IP+H+F  W+ +   L T  RM
Sbjct: 277 KGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRM 336

Query: 566 KKRKVVTDDTCIF*WREVEIEEHLFFNCTFAQEVWSKL----LNECGYSRIRAI------ 417
               +  D TCI   + +E  +HLFF+C FA E+W  L     N C Y+  + I      
Sbjct: 337 TLWNMGVDATCILCNKALESRDHLFFSCPFATEIWEPLAKTIYNTCFYTDWQTIINNVSR 396

Query: 416 NWEEEV 399
           NW + +
Sbjct: 397 NWPDRI 402


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