BLASTX nr result

ID: Coptis24_contig00016564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016564
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266...    80   6e-17
ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775...    73   2e-16
ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago ...    72   6e-16
ref|XP_003534339.1| PREDICTED: uncharacterized protein LOC100779...    69   2e-15
ref|XP_002328754.1| predicted protein [Populus trichocarpa] gi|2...    76   1e-14

>ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266552 [Vitis vinifera]
           gi|296085473|emb|CBI29205.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score = 79.7 bits (195), Expect(2) = 6e-17
 Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
 Frame = -1

Query: 412 ITFGCTIMLLAVATSMNQIQPYGKGWLDGECYVVKDGVYIGSAALTLANLLCILGSILAC 233
           I+FG  ++L+  ATSMN+ QPY +GWLDG+CY+VKDGVY+GSA L +  +   LGS++  
Sbjct: 105 ISFGVALILMGTATSMNRRQPYRRGWLDGKCYIVKDGVYVGSAVLVMLTIGSTLGSVIMT 164

Query: 232 --K*QIEQEQKGYA 197
             K Q+EQ ++ +A
Sbjct: 165 GRKSQVEQGRRIHA 178



 Score = 33.5 bits (75), Expect(2) = 6e-17
 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
 Frame = -3

Query: 668 AFVLGVFASTSLLSAQIIGNTLIFCSR---GKKIIAWKQRIPF---SLLILSWIT 522
           AF LGV A   L  A I+GN ++ C R   G+K  + K + P+   +LL++SWI+
Sbjct: 53  AFQLGVAALICLFIAHILGN-MVICRRICSGEKSSSGKAKTPWITSTLLVVSWIS 106


>ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775915 [Glycine max]
          Length = 191

 Score = 73.2 bits (178), Expect(2) = 2e-16
 Identities = 33/70 (47%), Positives = 50/70 (71%)
 Frame = -1

Query: 412 ITFGCTIMLLAVATSMNQIQPYGKGWLDGECYVVKDGVYIGSAALTLANLLCILGSILAC 233
           ++FG  ++LL VATSM++ Q YG+GWL+GECY+VK G+Y+GSA L L ++  ++GS L  
Sbjct: 110 LSFGIAVILLIVATSMSRRQAYGEGWLNGECYLVKGGIYVGSAILILVSVESLMGSALLT 169

Query: 232 K*QIEQEQKG 203
               E+  +G
Sbjct: 170 MKTNEEADQG 179



 Score = 38.5 bits (88), Expect(2) = 2e-16
 Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 6/56 (10%)
 Frame = -3

Query: 671 PAFVLGVFASTSLLSAQIIGNTLIF---CSRGKKIIAWKQRIPF---SLLILSWIT 522
           PAF LG+ +   L+ +QI+GN+++F   CS GK+    K  IPF    LL++SW++
Sbjct: 58  PAFGLGIASLVCLVLSQIVGNSILFKTYCSGGKRNA--KCEIPFVARILLLISWLS 111


>ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago truncatula]
           gi|355513829|gb|AES95452.1| hypothetical protein
           MTR_5g025640 [Medicago truncatula]
          Length = 183

 Score = 72.0 bits (175), Expect(2) = 6e-16
 Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
 Frame = -1

Query: 412 ITFGCTIMLLAVATSMNQIQPYGKGWLDGECYVVKDGVYIGSAALTLANLLCILGSILAC 233
           ++FG T++LL VATSM++ QPYG GWL+GECY+VK G Y GSA L L  +   +GS  + 
Sbjct: 107 LSFGVTVILLIVATSMSKRQPYGAGWLNGECYLVKGGTYAGSAILILVTIGSAIGSSFST 166

Query: 232 --K*QIEQEQKGYA 197
               Q EQ++K +A
Sbjct: 167 IKINQAEQDRKIHA 180



 Score = 37.7 bits (86), Expect(2) = 6e-16
 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 6/55 (10%)
 Frame = -3

Query: 668 AFVLGVFASTSLLSAQIIGNTLIF---CSRGKKIIAWKQRIPF---SLLILSWIT 522
           A+ LG+ A   L  AQIIGN+++F   CSR KK   +K  +PF    L+++SW++
Sbjct: 56  AYGLGIAALVCLFLAQIIGNSMLFKNSCSRRKKNAQYK--LPFFARLLILISWLS 108


>ref|XP_003534339.1| PREDICTED: uncharacterized protein LOC100779666 [Glycine max]
          Length = 191

 Score = 69.3 bits (168), Expect(2) = 2e-15
 Identities = 29/58 (50%), Positives = 45/58 (77%)
 Frame = -1

Query: 412 ITFGCTIMLLAVATSMNQIQPYGKGWLDGECYVVKDGVYIGSAALTLANLLCILGSIL 239
           ++FG  ++LL VATSM++ Q YG+GWL+GECY+VK G+Y+G A L + ++  ++GS L
Sbjct: 110 LSFGIAVILLIVATSMSRRQAYGEGWLNGECYLVKGGIYVGLAILIIVSVESLMGSAL 167



 Score = 38.9 bits (89), Expect(2) = 2e-15
 Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 6/56 (10%)
 Frame = -3

Query: 671 PAFVLGVFASTSLLSAQIIGNTLIF---CSRGKKIIAWKQRIPF---SLLILSWIT 522
           PAF LGV +   L+ +QI+GN+++F   CS GK+    K  IPF    LL++SW++
Sbjct: 58  PAFGLGVASLVCLVLSQIVGNSILFRTYCSGGKRNA--KFEIPFVARILLLISWLS 111


>ref|XP_002328754.1| predicted protein [Populus trichocarpa] gi|222839052|gb|EEE77403.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score = 75.9 bits (185), Expect(2) = 1e-14
 Identities = 37/68 (54%), Positives = 46/68 (67%)
 Frame = -1

Query: 412 ITFGCTIMLLAVATSMNQIQPYGKGWLDGECYVVKDGVYIGSAALTLANLLCILGSILAC 233
           I+FG  + LL+ ATSM++ Q YGKGWLD ECYVV+DGV+IGS  L L     +LGS +  
Sbjct: 107 ISFGIAVALLSTATSMSRRQAYGKGWLDHECYVVRDGVFIGSGVLILVTTATLLGSAIFT 166

Query: 232 K*QIEQEQ 209
             Q E EQ
Sbjct: 167 LRQAEAEQ 174



 Score = 29.3 bits (64), Expect(2) = 1e-14
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = -3

Query: 668 AFVLGVFASTSLLSAQIIGNTLIFC-----SRGKKIIAWKQRIPFSLLILSWIT 522
           AF  G+ A   L+ AQ+IGN +I              A K +I   LL+ SWI+
Sbjct: 55  AFGFGIAALIWLVIAQVIGNVMICTLFRHRENSNSSKAKKPKIATGLLVFSWIS 108


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