BLASTX nr result

ID: Coptis24_contig00016563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016563
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17091.3| unnamed protein product [Vitis vinifera]              187   1e-45
ref|XP_002271043.1| PREDICTED: lysine histidine transporter 1 [V...   186   2e-45
emb|CAN70084.1| hypothetical protein VITISV_003005 [Vitis vinifera]   184   8e-45
ref|XP_003606284.1| Lysine histidine transporter [Medicago trunc...   177   9e-43
ref|NP_001044853.1| Os01g0857400 [Oryza sativa Japonica Group] g...   177   9e-43

>emb|CBI17091.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/126 (68%), Positives = 99/126 (78%)
 Frame = -1

Query: 380 TLRPNTVAVYNQDEEEIPHFSSAPQPQNEKQLDAGALFVLQSKGSWIHCGYHLTTSIVAP 201
           + +   + V+N           A  PQ +K LDAGALFVL+SKGSW+HCGYHLTTSIVAP
Sbjct: 14  SFKKREMGVFNTGSTAADEGEEAAAPQQQKDLDAGALFVLKSKGSWVHCGYHLTTSIVAP 73

Query: 200 PLLSLPFAFASLGWIGGIFCLVVGALITFYSYNLISLVLEHHAQLGRRHLRFRDMAHDIL 21
           PLLSLP+AF  LGW  GI CLVVGAL+TFYSYNLISLVLEH+A +GRRHLRFRDMAHDIL
Sbjct: 74  PLLSLPYAFTFLGWAAGILCLVVGALVTFYSYNLISLVLEHNANMGRRHLRFRDMAHDIL 133

Query: 20  GPKWAR 3
           GP+W +
Sbjct: 134 GPRWGQ 139


>ref|XP_002271043.1| PREDICTED: lysine histidine transporter 1 [Vitis vinifera]
          Length = 457

 Score =  186 bits (473), Expect = 2e-45
 Identities = 86/120 (71%), Positives = 97/120 (80%)
 Frame = -1

Query: 362 VAVYNQDEEEIPHFSSAPQPQNEKQLDAGALFVLQSKGSWIHCGYHLTTSIVAPPLLSLP 183
           + V+N           A  PQ +K LDAGALFVL+SKGSW+HCGYHLTTSIVAPPLLSLP
Sbjct: 1   MGVFNTGSTAADEGEEAAAPQQQKDLDAGALFVLKSKGSWVHCGYHLTTSIVAPPLLSLP 60

Query: 182 FAFASLGWIGGIFCLVVGALITFYSYNLISLVLEHHAQLGRRHLRFRDMAHDILGPKWAR 3
           +AF  LGW  GI CLVVGAL+TFYSYNLISLVLEH+A +GRRHLRFRDMAHDILGP+W +
Sbjct: 61  YAFTFLGWAAGILCLVVGALVTFYSYNLISLVLEHNANMGRRHLRFRDMAHDILGPRWGQ 120


>emb|CAN70084.1| hypothetical protein VITISV_003005 [Vitis vinifera]
          Length = 451

 Score =  184 bits (467), Expect = 8e-45
 Identities = 85/120 (70%), Positives = 96/120 (80%)
 Frame = -1

Query: 362 VAVYNQDEEEIPHFSSAPQPQNEKQLDAGALFVLQSKGSWIHCGYHLTTSIVAPPLLSLP 183
           + V+N           A  PQ +  LDAGALFVL+SKGSW+HCGYHLTTSIVAPPLLSLP
Sbjct: 1   MGVFNTGSTAADEGEEAAAPQQQXDLDAGALFVLKSKGSWVHCGYHLTTSIVAPPLLSLP 60

Query: 182 FAFASLGWIGGIFCLVVGALITFYSYNLISLVLEHHAQLGRRHLRFRDMAHDILGPKWAR 3
           +AF  LGW  GI CLVVGAL+TFYSYNLISLVLEH+A +GRRHLRFRDMAHDILGP+W +
Sbjct: 61  YAFTFLGWAAGILCLVVGALVTFYSYNLISLVLEHNANMGRRHLRFRDMAHDILGPRWGQ 120


>ref|XP_003606284.1| Lysine histidine transporter [Medicago truncatula]
           gi|355507339|gb|AES88481.1| Lysine histidine transporter
           [Medicago truncatula]
          Length = 462

 Score =  177 bits (449), Expect = 9e-43
 Identities = 84/128 (65%), Positives = 103/128 (80%)
 Frame = -1

Query: 386 MGTLRPNTVAVYNQDEEEIPHFSSAPQPQNEKQLDAGALFVLQSKGSWIHCGYHLTTSIV 207
           MGTL P++ A + + E++    SS    ++++ +DAGALFVL+SKGSW+HCGYHLTTSIV
Sbjct: 1   MGTLLPSSTAEHEKSEKQN---SSLQIDEHQRDVDAGALFVLKSKGSWVHCGYHLTTSIV 57

Query: 206 APPLLSLPFAFASLGWIGGIFCLVVGALITFYSYNLISLVLEHHAQLGRRHLRFRDMAHD 27
           APPLLSLP+AF  LGW  GIF LV+GA++TFYSYNL+S VLEH AQLG R LRFRDMA D
Sbjct: 58  APPLLSLPYAFTLLGWTAGIFFLVIGAMVTFYSYNLLSRVLEHQAQLGNRQLRFRDMARD 117

Query: 26  ILGPKWAR 3
           ILGP+W R
Sbjct: 118 ILGPRWGR 125


>ref|NP_001044853.1| Os01g0857400 [Oryza sativa Japonica Group]
           gi|15290010|dbj|BAB63704.1| putative betaine/proline
           transporter [Oryza sativa Japonica Group]
           gi|56785361|dbj|BAD82319.1| putative betaine/proline
           transporter [Oryza sativa Japonica Group]
           gi|113534384|dbj|BAF06767.1| Os01g0857400 [Oryza sativa
           Japonica Group]
          Length = 457

 Score =  177 bits (449), Expect = 9e-43
 Identities = 85/116 (73%), Positives = 95/116 (81%)
 Frame = -1

Query: 350 NQDEEEIPHFSSAPQPQNEKQLDAGALFVLQSKGSWIHCGYHLTTSIVAPPLLSLPFAFA 171
           ++++EE     +      +K LDAGALFVLQSKGSW+HCGYHLTTSIVAPPLLSLPFAFA
Sbjct: 5   SREDEEAKKMEAGGDTVGQK-LDAGALFVLQSKGSWLHCGYHLTTSIVAPPLLSLPFAFA 63

Query: 170 SLGWIGGIFCLVVGALITFYSYNLISLVLEHHAQLGRRHLRFRDMAHDILGPKWAR 3
           SLGW  G+ CLV+GA +TFYSYNLISLVLEHHAQ GRR LRFRDMA DILGP W R
Sbjct: 64  SLGWAAGLICLVIGAAVTFYSYNLISLVLEHHAQQGRRQLRFRDMATDILGPGWGR 119


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