BLASTX nr result

ID: Coptis24_contig00016559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016559
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535131.1| zinc finger protein, putative [Ricinus commu...   134   6e-30
ref|XP_002320255.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29
ref|XP_002281242.1| PREDICTED: probable S-acyltransferase At4g01...   130   8e-29
emb|CAN83141.1| hypothetical protein VITISV_035325 [Vitis vinifera]   130   1e-28
ref|XP_003535297.1| PREDICTED: probable S-acyltransferase At4g01...   115   4e-24

>ref|XP_002535131.1| zinc finger protein, putative [Ricinus communis]
           gi|223523954|gb|EEF27251.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 481

 Score =  134 bits (338), Expect = 6e-30
 Identities = 73/142 (51%), Positives = 93/142 (65%), Gaps = 4/142 (2%)
 Frame = -2

Query: 415 YDYILAMKEENQSKVMQTXXXXXXXXXXXXXXSPEKPKFLSRFICDGQKTSQEVTSFSVR 236
           YDYILAMKEE Q+  +                 PEKP F+SRFIC G++ +Q  T  S+R
Sbjct: 266 YDYILAMKEETQAMELDPFDDSDFSSDSDFDS-PEKPTFVSRFICRGRRGNQNPTRLSIR 324

Query: 235 IDKEPDSSTLKKKPGFHASIDPWKLIKMSREKTLMAAEMGKERLVKQK---LAGELKPPP 65
           ID++P+ ST+ KK GFH SI+PWKLI +SREK L+AAE  +ER++KQK       LKP P
Sbjct: 325 IDRDPEPSTINKKQGFHVSINPWKLITLSREKALLAAEKARERIMKQKPPVQQDSLKPLP 384

Query: 64  LETKCGPLMNAEEN-TAYATGS 2
           LETK GPLMN ++N T   +GS
Sbjct: 385 LETKNGPLMNPDKNMTDMGSGS 406


>ref|XP_002320255.1| predicted protein [Populus trichocarpa] gi|222861028|gb|EEE98570.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  131 bits (329), Expect = 6e-29
 Identities = 72/140 (51%), Positives = 95/140 (67%), Gaps = 2/140 (1%)
 Frame = -2

Query: 415 YDYILAMKEENQSKVMQTXXXXXXXXXXXXXXSPEKPKFLSRFICDGQKTSQEVTSFSVR 236
           YDYILAM+E N+S  +                 P+K   +SRFIC G + +Q   S S+R
Sbjct: 271 YDYILAMREVNESMELDPFDDSDFSSDSDFDS-PKKSTIVSRFIC-GHRGNQNPASLSIR 328

Query: 235 IDKEPDSSTLKKKPGFHASIDPWKLIKMSREKTLMAAEMGKERLVKQK-LAGELKPPPLE 59
           ID++P+SSTL KK GFHASI+PWKLIK+S+EK L+AAE  +ER++KQK +   L+P PLE
Sbjct: 329 IDRDPESSTLTKKQGFHASINPWKLIKLSKEKALLAAEKTRERIMKQKPVEQPLRPLPLE 388

Query: 58  TKCGPLMNAEEN-TAYATGS 2
           TKCGPLMN ++N T   +GS
Sbjct: 389 TKCGPLMNQDKNMTTMESGS 408


>ref|XP_002281242.1| PREDICTED: probable S-acyltransferase At4g01730 [Vitis vinifera]
           gi|297744084|emb|CBI37054.3| unnamed protein product
           [Vitis vinifera]
          Length = 506

 Score =  130 bits (328), Expect = 8e-29
 Identities = 74/137 (54%), Positives = 88/137 (64%), Gaps = 5/137 (3%)
 Frame = -2

Query: 415 YDYILAMKEENQSKVMQTXXXXXXXXXXXXXXS-PEKPKFLSRFICDGQKTSQEVTS-FS 242
           YDYILAM+EENQ   +                  PEKP F+SRFIC GQ+ +Q  T   S
Sbjct: 284 YDYILAMREENQPMELDPFNDSDFSSDDSSEFDSPEKPTFVSRFICRGQRMNQNPTRRLS 343

Query: 241 VRIDKEPDSSTLKKKPGFHASIDPWKLIKMSREKTLMAAEMGKERLVKQKLAGE---LKP 71
           +RID++P +S L KK GF A IDPWKLIKMS+EK L+AAE  +ERL+KQK   E   L+P
Sbjct: 344 IRIDEDPATSNLIKKQGFRAGIDPWKLIKMSKEKALLAAEKARERLMKQKPVVEHDALQP 403

Query: 70  PPLETKCGPLMNAEENT 20
            PLETK GPLMN E  T
Sbjct: 404 LPLETKSGPLMNPERKT 420


>emb|CAN83141.1| hypothetical protein VITISV_035325 [Vitis vinifera]
          Length = 968

 Score =  130 bits (327), Expect = 1e-28
 Identities = 74/137 (54%), Positives = 88/137 (64%), Gaps = 5/137 (3%)
 Frame = -2

Query: 415  YDYILAMKEENQSKVMQTXXXXXXXXXXXXXXS-PEKPKFLSRFICDGQKTSQEVTS-FS 242
            YDYILAM+EENQ   +                  PEKP F+SRFIC GQ+ +Q  T   S
Sbjct: 746  YDYILAMREENQPMELDPFNDSDFSSDDSSEFDSPEKPTFVSRFICRGQRMNQNPTRRLS 805

Query: 241  VRIDKEPDSSTLKKKPGFHASIDPWKLIKMSREKTLMAAEMGKERLVKQKLAGE---LKP 71
            +RID++P +S L KK GF A IDPWKLIKMS+EK L+AAE  +ERL+KQK   E   L+P
Sbjct: 806  IRIDEDPATSNLIKKQGFRAGIDPWKLIKMSKEKALLAAEKARERLMKQKPVVEHDALQP 865

Query: 70   PPLETKCGPLMNAEENT 20
             PLETK GPLMN E  T
Sbjct: 866  LPLETKSGPLMNPEXKT 882


>ref|XP_003535297.1| PREDICTED: probable S-acyltransferase At4g01730-like [Glycine max]
          Length = 508

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/135 (45%), Positives = 88/135 (65%), Gaps = 4/135 (2%)
 Frame = -2

Query: 415 YDYILAMKEENQSKVMQTXXXXXXXXXXXXXXS-PEKPKFLSRFICDGQKTSQEVTSFSV 239
           YDYILAM+EEN++  +++                PEKP  +SRF+C G ++S  +   S+
Sbjct: 287 YDYILAMREENEAMDLESLDDSDFSSDESIDFDSPEKPPLMSRFLCKGNQSSPRL---SI 343

Query: 238 RIDKEPDSSTLKKKPGFHASIDPWKLIKMSREKTLMAAEMGKERLVKQKLAGE---LKPP 68
           RI+ E + S L K   FH SI+PWKLIK++REK  +AAE  +E+++++K  GE   LKP 
Sbjct: 344 RIEGETEPSPLIKTKKFHVSINPWKLIKLTREKAQLAAEKAREKIMREKPMGEHNSLKPL 403

Query: 67  PLETKCGPLMNAEEN 23
           PLETKCGPLM+ ++N
Sbjct: 404 PLETKCGPLMSPDKN 418


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