BLASTX nr result

ID: Coptis24_contig00016544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016544
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-18
ref|XP_003632008.1| PREDICTED: probable methyltransferase PMT8 [...    90   3e-16
emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]    90   3e-16
ref|XP_003556380.1| PREDICTED: probable methyltransferase PMT8-l...    86   6e-15
ref|XP_003536215.1| PREDICTED: probable methyltransferase PMT8-l...    86   6e-15

>ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|222851493|gb|EEE89040.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 83.2 bits (204), Expect(2) = 3e-18
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = +1

Query: 445 CLDAPLEGACVPCGHMARCMSCLNEIRAKKWGCPVCRAKV 564
           CLDA +EGAC+PCGHMA CMSCL EI+AKKWGCPVCRAK+
Sbjct: 394 CLDALVEGACIPCGHMAGCMSCLKEIKAKKWGCPVCRAKI 433



 Score = 33.9 bits (76), Expect(2) = 3e-18
 Identities = 29/103 (28%), Positives = 45/103 (43%)
 Frame = +3

Query: 96  NTNASLIPETASTTNIEDLELAMAINASIHSAMEERTPLPNAHMSSVISHTNDCINSLDT 275
           N+ A  +  TA  +  ED+E+AMA+NA I SA E   P+ + H S+  S +     S  T
Sbjct: 260 NSQAPAVQATAPPS-AEDIEIAMAMNAYIQSAAER--PIFDPHSSAGASSSTSWTTSSST 316

Query: 276 NSSQSDSGPLRRAAAPLIGTSSRLSYQPAQDTYNGGDVCEAGP 404
             ++  +  +           S  S  P  D     ++ E GP
Sbjct: 317 QQTKIQNSSIADVQTATDAQDSVPSAPPIVD-----EIVEDGP 354


>ref|XP_003632008.1| PREDICTED: probable methyltransferase PMT8 [Vitis vinifera]
          Length = 988

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +1

Query: 445 CLDAPLEGACVPCGHMARCMSCLNEIRAKKWGCPVCRAKV 564
           CLDAP+EGAC+PCGHMA CMSCLNEI+AKKWGCPVCRAK+
Sbjct: 352 CLDAPIEGACIPCGHMAGCMSCLNEIKAKKWGCPVCRAKI 391


>emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]
          Length = 500

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +1

Query: 445 CLDAPLEGACVPCGHMARCMSCLNEIRAKKWGCPVCRAKV 564
           CLDAP+EGAC+PCGHMA CMSCLNEI+AKKWGCPVCRAK+
Sbjct: 452 CLDAPIEGACIPCGHMAGCMSCLNEIKAKKWGCPVCRAKI 491


>ref|XP_003556380.1| PREDICTED: probable methyltransferase PMT8-like [Glycine max]
          Length = 1032

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +1

Query: 445 CLDAPLEGACVPCGHMARCMSCLNEIRAKKWGCPVCRAKV 564
           CLDAP EGAC+PCGH+A CMSCLNE+++KKWGCPVCRAK+
Sbjct: 382 CLDAPAEGACIPCGHVAGCMSCLNEVKSKKWGCPVCRAKI 421


>ref|XP_003536215.1| PREDICTED: probable methyltransferase PMT8-like [Glycine max]
          Length = 1031

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +1

Query: 445 CLDAPLEGACVPCGHMARCMSCLNEIRAKKWGCPVCRAKV 564
           CLDAP EGAC+PCGH+A CMSCLNE+++KKWGCPVCRAK+
Sbjct: 381 CLDAPAEGACIPCGHVAGCMSCLNEVKSKKWGCPVCRAKI 420


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