BLASTX nr result

ID: Coptis24_contig00016542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016542
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278599.2| PREDICTED: uncharacterized protein LOC100260...   158   4e-37
ref|XP_002516645.1| protein binding protein, putative [Ricinus c...   149   2e-34
ref|XP_002313979.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|NP_001242032.1| uncharacterized protein LOC100800041 [Glycin...   141   5e-32
ref|XP_002298491.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31

>ref|XP_002278599.2| PREDICTED: uncharacterized protein LOC100260376 [Vitis vinifera]
          Length = 264

 Score =  158 bits (400), Expect = 4e-37
 Identities = 81/111 (72%), Positives = 90/111 (81%)
 Frame = -2

Query: 333 MKKHNFKRVVVSENKKNEEIGWELRPGGMLVQKRIDGVGASGPMIKIKVSHGSYQHEINV 154
           M+K + K VV   N   EEI WELRPGGMLVQKR  G  AS PMIKIKVSHGSY H I +
Sbjct: 1   MRKSSCKGVV--GNVCKEEIDWELRPGGMLVQKRNAGDAASSPMIKIKVSHGSYHHYITI 58

Query: 153 PAQSTFGDLKRLLAHETGLKPKEQRLLFRGKEKEDTDCLHMAGVLDMSKVV 1
           PAQSTFGDLKR+LAHETGL+PKEQRLLFRGKEKE+ +CLHM GV +MSKV+
Sbjct: 59  PAQSTFGDLKRVLAHETGLEPKEQRLLFRGKEKENDECLHMVGVKEMSKVI 109


>ref|XP_002516645.1| protein binding protein, putative [Ricinus communis]
           gi|223544217|gb|EEF45740.1| protein binding protein,
           putative [Ricinus communis]
          Length = 265

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/93 (75%), Positives = 81/93 (87%)
 Frame = -2

Query: 279 EIGWELRPGGMLVQKRIDGVGASGPMIKIKVSHGSYQHEINVPAQSTFGDLKRLLAHETG 100
           +I WELRPGGMLVQKR  G G+SGPMIKIKVSHGSY +E+ VPAQSTFGDLK++L HE G
Sbjct: 18  QIDWELRPGGMLVQKREVGDGSSGPMIKIKVSHGSYHYEVTVPAQSTFGDLKKVLVHEAG 77

Query: 99  LKPKEQRLLFRGKEKEDTDCLHMAGVLDMSKVV 1
           L+ +EQRLLFRGKEKED +CLHM GV D+SKV+
Sbjct: 78  LEAEEQRLLFRGKEKEDNECLHMEGVKDLSKVI 110


>ref|XP_002313979.1| predicted protein [Populus trichocarpa] gi|222850387|gb|EEE87934.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/93 (75%), Positives = 83/93 (89%)
 Frame = -2

Query: 279 EIGWELRPGGMLVQKRIDGVGASGPMIKIKVSHGSYQHEINVPAQSTFGDLKRLLAHETG 100
           EI WELRPGGMLVQKR  GVG+SGPMIKIKVSHGS  ++ +VPAQSTFGDLK++LA+ETG
Sbjct: 18  EIDWELRPGGMLVQKRDVGVGSSGPMIKIKVSHGSCHYDTDVPAQSTFGDLKKVLANETG 77

Query: 99  LKPKEQRLLFRGKEKEDTDCLHMAGVLDMSKVV 1
           L+P+EQRLLFRGKE+E+ + LHM GV DMSKV+
Sbjct: 78  LEPQEQRLLFRGKERENDEYLHMVGVKDMSKVI 110


>ref|NP_001242032.1| uncharacterized protein LOC100800041 [Glycine max]
           gi|255641432|gb|ACU20992.1| unknown [Glycine max]
          Length = 235

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/96 (72%), Positives = 76/96 (79%)
 Frame = -2

Query: 288 KNEEIGWELRPGGMLVQKRIDGVGASGPMIKIKVSHGSYQHEINVPAQSTFGDLKRLLAH 109
           K   I WELRPGGMLVQKR     +S  MIKIKVSHGSY HE+ VPAQSTFG LK +L  
Sbjct: 19  KGGSIDWELRPGGMLVQKRQPLDSSSSSMIKIKVSHGSYHHEVTVPAQSTFGHLKMVLTS 78

Query: 108 ETGLKPKEQRLLFRGKEKEDTDCLHMAGVLDMSKVV 1
           ETGL+PKEQRLLFRGKEKED +CLHM GV DMSKV+
Sbjct: 79  ETGLEPKEQRLLFRGKEKEDEECLHMVGVKDMSKVI 114


>ref|XP_002298491.1| predicted protein [Populus trichocarpa] gi|222845749|gb|EEE83296.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  139 bits (350), Expect = 2e-31
 Identities = 69/93 (74%), Positives = 79/93 (84%)
 Frame = -2

Query: 279 EIGWELRPGGMLVQKRIDGVGASGPMIKIKVSHGSYQHEINVPAQSTFGDLKRLLAHETG 100
           EI WELRPGGMLVQK   G G+SGPMIKIKVSHG   ++I VPAQSTFGDLK++LAHETG
Sbjct: 16  EIHWELRPGGMLVQKMDVGDGSSGPMIKIKVSHGLCHYDIAVPAQSTFGDLKKVLAHETG 75

Query: 99  LKPKEQRLLFRGKEKEDTDCLHMAGVLDMSKVV 1
           L+ KEQRLLF+GKEKE+ + LHM GV DMSKV+
Sbjct: 76  LESKEQRLLFKGKEKENDEYLHMVGVKDMSKVI 108


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