BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016536
         (2288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]   346   2e-92
dbj|BAK61850.1| PPR containing protein [Citrus unshiu]                339   2e-90
ref|XP_002308534.1| predicted protein [Populus trichocarpa] gi|2...   310   1e-81
ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containi...   279   3e-72
ref|XP_003523650.1| PREDICTED: pentatricopeptide repeat-containi...   270   2e-69

>emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  346 bits (887), Expect = 2e-92
 Identities = 171/290 (58%), Positives = 217/290 (74%), Gaps = 6/290 (2%)
 Frame = +2

Query: 50  ILPLITSINSVLQTLIHPNP------NYSQLNQFSLNLNPNLVIEVIKTQTNPQNALNFF 211
           +L   +SI S LQTL   NP      + S L+QF+  LNP LVI+VIK+Q NP +AL FF
Sbjct: 75  LLSTASSITSFLQTLNPQNPTPNSPTSISPLSQFAPFLNPXLVIQVIKSQKNPYHALFFF 134

Query: 212 KWASNPCPNPNNYFHTFQCYNAIIDVLLSHCLFTTAENILESSNNLGDFMIGKIIKAHGD 391
            WASNP PNPNNY H+  CY AI D+L+SH LF+TA ++L+S + L DF   K +KA+GD
Sbjct: 135 NWASNPNPNPNNYSHSHLCYVAITDLLISHGLFSTASSLLQSHHRLSDFAAAKFVKAYGD 194

Query: 392 RGSIRAAIYWLNRAKSIESYRCLFSYNSILGVLVRMNDISFARSIFDEIVKEGVIRPDVS 571
           RG IR AI+W +RAK +ES RCLFSYN+ILGV V+ N I  AR++FD+IVKEGV++PDVS
Sbjct: 195 RGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVS 254

Query: 572 TYTTMIRGYCKLGMIEDAKRMFNGMCCKPNVFTYNTFVAGLCRKGEMKYAREIVDEMIVG 751
           TYTT+IRGYCK+GMIE+AK +F+ M CKPN+ TYNT + G C+KG M+ A +IVD+M   
Sbjct: 255 TYTTIIRGYCKMGMIENAKNVFDEMGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTET 314

Query: 752 KECLPDTVTFTTLIDGYCKQNQLEEAEKCMEEMVRRNCKLAECLYLQCIY 901
           ++C+PDTVT+TTLIDGYCK+ +LEEA K MEEMV RNC+     Y   IY
Sbjct: 315 EDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIY 364



 Score =  303 bits (776), Expect = 1e-79
 Identities = 147/262 (56%), Positives = 195/262 (74%)
 Frame = +3

Query: 873  PNVYTYNAFIYGLCRNGKVEEAKRMMSKMRLNGLKDNVATHTNLLKGLCIVGRSDDAANH 1052
            PNV TYNA IYGLC NG V+EAKRMM++MRLNGLKDNVATHT++LKGLC+VG+ DDAA H
Sbjct: 354  PNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARH 413

Query: 1053 LKEMISLGLKPDVKAYSVVIHDYCKLGKPTKGIVLLDEMKSRSMNPHVSCFNSLFRALCD 1232
            LKEM+ LG++ D KAY VV+++YCK+GK    I LL EMKSR +NP VS FN++FR L +
Sbjct: 414  LKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVE 473

Query: 1233 LGEHDRAIRYLKEMPQSGSSPNFVSYSTVICKLCSVRGRMRDVEDLVVNMHQKGLLPDTT 1412
             G+ D+A   L++M Q G +PNF+SYSTVI  LC  +GRM +VE+ V +M + G   D +
Sbjct: 474  SGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDAS 533

Query: 1413 MYSTMVRGYCQDDDIQMAIGVLREMIEKGIVIHRESFSVFVEKLCGNGKASEVKKLFEEM 1592
            MYS +V+GYC+D +  MA+ +  EM++ G VI+ ESF  FV+ L    KA EV+K FEEM
Sbjct: 534  MYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVEKFFEEM 593

Query: 1593 RKRCPVPDVDSYQSLVNENLCK 1658
             +RCP  D+  Y+ +++E+LCK
Sbjct: 594  SRRCPGIDIHKYRRILDEHLCK 615



 Score =  123 bits (309), Expect = 2e-25
 Identities = 76/263 (28%), Positives = 129/263 (49%), Gaps = 1/263 (0%)
 Frame = +3

Query: 873  PNVYTYNAFIYGLCRNGKVEEAKRMMSKMRLNGLKDNVATHTNLLKGLCIVGRSDDAANH 1052
            P+V TY   I G C+ G +E AK +  +M   G K N+ T+  ++ G C  G  + A   
Sbjct: 251  PDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAMKI 307

Query: 1053 LKEMISL-GLKPDVKAYSVVIHDYCKLGKPTKGIVLLDEMKSRSMNPHVSCFNSLFRALC 1229
            + +M       PD   Y+ +I  YCK G+  + +  ++EM SR+  P+V  +N++   LC
Sbjct: 308  VDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLC 367

Query: 1230 DLGEHDRAIRYLKEMPQSGSSPNFVSYSTVICKLCSVRGRMRDVEDLVVNMHQKGLLPDT 1409
              G  D A R +  M  +G   N  ++++++  LC V G++ D    +  M   G+  D 
Sbjct: 368  LNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVV-GKLDDAARHLKEMVGLGMEADA 426

Query: 1410 TMYSTMVRGYCQDDDIQMAIGVLREMIEKGIVIHRESFSVFVEKLCGNGKASEVKKLFEE 1589
              Y  +V  YC+      AI +L+EM  +GI     SF+     L  +GK  +   +  +
Sbjct: 427  KAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQ 486

Query: 1590 MRKRCPVPDVDSYQSLVNENLCK 1658
            M++    P+  SY +++ + LCK
Sbjct: 487  MKQLGCTPNFLSYSTVI-DGLCK 508



 Score =  118 bits (295), Expect = 8e-24
 Identities = 65/255 (25%), Positives = 136/255 (53%), Gaps = 2/255 (0%)
 Frame = +3

Query: 879  VYTYNAFIYGLCRNGKVEEAKRMMSKMRLNGL-KDNVATHTNLLKGLCIVGRSDDAANHL 1055
            +++YNA +    +  ++  A+ +  ++   G+ K +V+T+T +++G C +G  ++A N  
Sbjct: 217  LFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVF 276

Query: 1056 KEMISLGLKPDVKAYSVVIHDYCKLGKPTKGIVLLDEM-KSRSMNPHVSCFNSLFRALCD 1232
             EM   G KP++  Y+ +I+ +CK G     + ++D+M ++    P    + +L    C 
Sbjct: 277  DEM---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCK 333

Query: 1233 LGEHDRAIRYLKEMPQSGSSPNFVSYSTVICKLCSVRGRMRDVEDLVVNMHQKGLLPDTT 1412
             GE + A++Y++EM      PN ++Y+ +I  LC + G + + + ++  M   GL  +  
Sbjct: 334  RGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLC-LNGNVDEAKRMMTRMRLNGLKDNVA 392

Query: 1413 MYSTMVRGYCQDDDIQMAIGVLREMIEKGIVIHRESFSVFVEKLCGNGKASEVKKLFEEM 1592
             ++++++G C    +  A   L+EM+  G+    +++ V V + C  GKA +   L +EM
Sbjct: 393  THTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEM 452

Query: 1593 RKRCPVPDVDSYQSL 1637
            + R   P V S+ ++
Sbjct: 453  KSRGINPSVSSFNAV 467



 Score = 79.7 bits (195), Expect = 3e-12
 Identities = 49/191 (25%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
 Frame = +3

Query: 1095 AYSVVIHDYCKLGKPTKGIVLLDEM-KSRSMNPHVSCFNSLFRALCDLGEHDRAIRYLKE 1271
            +Y+ ++  + K  +      + D++ K   + P VS + ++ R  C +G  + A     E
Sbjct: 219  SYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDE 278

Query: 1272 MPQSGSSPNFVSYSTVICKLCSVRGRMRDVEDLVVNMHQ-KGLLPDTTMYSTMVRGYCQD 1448
            M   G  PN V+Y+T+I   C  +G M     +V  M + +  +PDT  Y+T++ GYC+ 
Sbjct: 279  M---GCKPNLVTYNTMINGFCK-KGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKR 334

Query: 1449 DDIQMAIGVLREMIEKGIVIHRESFSVFVEKLCGNGKASEVKKLFEEMRKRCPVPDVDSY 1628
             +++ A+  + EM+ +    +  +++  +  LC NG   E K++   MR      +V ++
Sbjct: 335  GELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATH 394

Query: 1629 QSLVNENLCKV 1661
             S++ + LC V
Sbjct: 395  TSIL-KGLCVV 404


>dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
          Length = 567

 Score =  339 bits (869), Expect = 2e-90
 Identities = 167/300 (55%), Positives = 216/300 (72%), Gaps = 5/300 (1%)
 Frame = +2

Query: 17  RSITQNTNPNSILPLITSINSVLQTLIHPNPNYSQ-----LNQFSLNLNPNLVIEVIKTQ 181
           RS+T  +       L+TSI SV+Q L   NP+        L+QFSL L  N+V +VI  Q
Sbjct: 6   RSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQ 65

Query: 182 TNPQNALNFFKWASNPCPNPNNYFHTFQCYNAIIDVLLSHCLFTTAENILESSNNLGDFM 361
           TNP +AL FF WASNP PNPN Y HT  CY AI DVLLSH L + A ++L++SN L DF 
Sbjct: 66  TNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFF 125

Query: 362 IGKIIKAHGDRGSIRAAIYWLNRAKSIESYRCLFSYNSILGVLVRMNDISFARSIFDEIV 541
           I K+IKA+GDRG+++AAI+W ++AK IE+  CL+SYNS+LGVLVR+N I  A   F +IV
Sbjct: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185

Query: 542 KEGVIRPDVSTYTTMIRGYCKLGMIEDAKRMFNGMCCKPNVFTYNTFVAGLCRKGEMKYA 721
           KE V+ PDVSTYTTMIRGYCK+GMIE+AK++F+ M  KPN+  YNT + G C+KG+M+ A
Sbjct: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGDMESA 245

Query: 722 REIVDEMIVGKECLPDTVTFTTLIDGYCKQNQLEEAEKCMEEMVRRNCKLAECLYLQCIY 901
           R + D M+ G++CLP+ VT+TTLIDGYCK+ +LEEA+KCM EM+ R C+  E  Y   IY
Sbjct: 246 RLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 305



 Score =  282 bits (722), Expect = 2e-73
 Identities = 134/261 (51%), Positives = 187/261 (71%)
 Frame = +3

Query: 873  PNVYTYNAFIYGLCRNGKVEEAKRMMSKMRLNGLKDNVATHTNLLKGLCIVGRSDDAANH 1052
            PN  TYNA IYGLC NG+V+EAK +M+KMRLNG KDNV+TH ++LKGLC+VG+ D A  +
Sbjct: 295  PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 354

Query: 1053 LKEMISLGLKPDVKAYSVVIHDYCKLGKPTKGIVLLDEMKSRSMNPHVSCFNSLFRALCD 1232
            L+ ++   + PDVK+Y VVI+ +CK+GK  + I LL EM++R + P V  FN++FR L +
Sbjct: 355  LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 414

Query: 1233 LGEHDRAIRYLKEMPQSGSSPNFVSYSTVICKLCSVRGRMRDVEDLVVNMHQKGLLPDTT 1412
             GE DRAI  LK+MPQ    PNFVSY+T+IC LC  +GRM+DVEDLV  M + G   D T
Sbjct: 415  NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 474

Query: 1413 MYSTMVRGYCQDDDIQMAIGVLREMIEKGIVIHRESFSVFVEKLCGNGKASEVKKLFEEM 1592
            MYS +++GYC++ +++  + +  EM+ K  VI  ESFSV V++LC  GK +E +KLF+  
Sbjct: 475  MYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFSVLVKQLCAKGKVTEAEKLFDTC 534

Query: 1593 RKRCPVPDVDSYQSLVNENLC 1655
              RCP  DVDSY+ ++++ +C
Sbjct: 535  -SRCPAVDVDSYRRVLDQQIC 554



 Score =  110 bits (275), Expect = 2e-21
 Identities = 68/255 (26%), Positives = 131/255 (51%), Gaps = 2/255 (0%)
 Frame = +3

Query: 879  VYTYNAFIYGLCRNGKVEEAKRMMSKM-RLNGLKDNVATHTNLLKGLCIVGRSDDAANHL 1055
            +Y+YN+ +  L R   ++ A+    ++ + N +  +V+T+T +++G C +G  ++A    
Sbjct: 158  LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK--- 214

Query: 1056 KEMISLGLKPDVKAYSVVIHDYCKLGKPTKGIVLLDEMKS-RSMNPHVSCFNSLFRALCD 1232
            K    + +KP++ AY+ +I+ +CK G      ++ D M S     P+   + +L    C 
Sbjct: 215  KVFDVMTVKPNLLAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCK 274

Query: 1233 LGEHDRAIRYLKEMPQSGSSPNFVSYSTVICKLCSVRGRMRDVEDLVVNMHQKGLLPDTT 1412
             GE + A + + EM   G  PN ++Y+ +I  LC + GR+ + + L+  M   G   + +
Sbjct: 275  KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC-INGRVDEAKMLMAKMRLNGFKDNVS 333

Query: 1413 MYSTMVRGYCQDDDIQMAIGVLREMIEKGIVIHRESFSVFVEKLCGNGKASEVKKLFEEM 1592
             + +M++G C       A+G LR ++E  +    +S+ V +   C  GK+ E   L +EM
Sbjct: 334  THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 393

Query: 1593 RKRCPVPDVDSYQSL 1637
            R R   P V S+ ++
Sbjct: 394  RARGLKPTVFSFNAV 408



 Score =  103 bits (258), Expect = 2e-19
 Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 34/290 (11%)
 Frame = +3

Query: 873  PNVYTYNAFIYGLCRNGKVEEAKRMMSKM-----------RLNGL--------------- 974
            P+V TY   I G C+ G +E AK++   M            +NG                
Sbjct: 192  PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGDMESARLVFDR 251

Query: 975  -------KDNVATHTNLLKGLCIVGRSDDAANHLKEMISLGLKPDVKAYSVVIHDYCKLG 1133
                     N  T+T L+ G C  G  ++A   + EM++ G +P+   Y+ +I+  C  G
Sbjct: 252  MMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 311

Query: 1134 KPTKGIVLLDEMKSRSMNPHVSCFNSLFRALCDLGEHDRAIRYLKEMPQSGSSPNFVSYS 1313
            +  +  +L+ +M+      +VS   S+ + LC +G+ D+A+ YL+ + ++  +P+  SY 
Sbjct: 312  RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 371

Query: 1314 TVICKLCSVRGRMRDVEDLVVNMHQKGLLPDTTMYSTMVRGYCQDDDIQMAIGVLREMIE 1493
             VI   C + G+  +   L+  M  +GL P    ++ + R   ++ ++  AI +L++M +
Sbjct: 372  VVINGFCKI-GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 430

Query: 1494 KGIVIHRESFSVFVEKLC-GNGKASEVKKLFEEMRKRCPVPDVDSYQSLV 1640
               + +  S++  +  LC   G+  +V+ L + M +     D   Y  L+
Sbjct: 431  MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 480



 Score = 82.8 bits (203), Expect = 4e-13
 Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 37/174 (21%)
 Frame = +2

Query: 458 LFSYNSILGVLVRMNDISFARSIFDEIVKEGVIRPDVSTYTTMIRGYCKLGMIEDAKRMF 637
           L +YN+++    +  D+  AR +FD ++      P+  TYTT+I GYCK G +E+AK+  
Sbjct: 226 LLAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCM 285

Query: 638 NGMC---CKPNVFTYNTFVAGLCRKGEMKYAREIVDEM--------------------IV 748
           N M    C+PN  TYN  + GLC  G +  A+ ++ +M                    +V
Sbjct: 286 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 345

Query: 749 GK--------------ECLPDTVTFTTLIDGYCKQNQLEEAEKCMEEMVRRNCK 868
           GK                 PD  ++  +I+G+CK  + +EA   ++EM  R  K
Sbjct: 346 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 399



 Score = 68.2 bits (165), Expect = 9e-09
 Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
 Frame = +3

Query: 1167 MKSRSMNPHVSCFNSLFRALCDLGEHDRAIRYLKEMPQSGSSPNFVSYSTVICKLCSVRG 1346
            +K   + P VS + ++ R  C +G  + A +    M      PN ++Y+T+I   C  +G
Sbjct: 185  VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK-KG 240

Query: 1347 RMRDVEDLVVNMHQKG--LLPDTTMYSTMVRGYCQDDDIQMAIGVLREMIEKGIVIHRES 1520
             M     LV +    G   LP+   Y+T++ GYC+  +++ A   + EM+ +G   +  +
Sbjct: 241  DMESAR-LVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELT 299

Query: 1521 FSVFVEKLCGNGKASEVKKLFEEMRKRCPVPDVDSYQSLVNENLCKV 1661
            ++  +  LC NG+  E K L  +MR      +V +++S++ + LC V
Sbjct: 300  YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML-KGLCVV 345



 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
 Frame = +2

Query: 539 VKEGVIRPDVSTYTTMIRGYCKLGMIEDAKRMFNGMCC---KPNVFTYNTFVAGLCRKGE 709
           V E  + PDV +Y  +I G+CK+G  ++A  +   M     KP VF++N     L   GE
Sbjct: 358 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 417

Query: 710 MKYAREIVDEMIVGKECLPDTVTFTTLIDGYC-KQNQLEEAEKCMEEMVRRNCKLAECLY 886
           +  A  ++ +M    +CLP+ V++ T+I G C  + ++++ E  ++ M+R    L   +Y
Sbjct: 418 LDRAILLLKQM-PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 476


>ref|XP_002308534.1| predicted protein [Populus trichocarpa] gi|222854510|gb|EEE92057.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  310 bits (794), Expect = 1e-81
 Identities = 151/304 (49%), Positives = 213/304 (70%), Gaps = 6/304 (1%)
 Frame = +2

Query: 8   SAGRSITQNTNPNSILPLITSINSVLQTLIHPNPNY-----SQLNQFSLNLNPNLVIEVI 172
           +  R++T++   + +  L+T+I S L+TL   NPN      + LNQFS +L+ NLVIEVI
Sbjct: 8   ATARTLTRHPRSSELASLVTAITSCLETLNPQNPNPKHINPTHLNQFSPHLDSNLVIEVI 67

Query: 173 KTQT-NPQNALNFFKWASNPCPNPNNYFHTFQCYNAIIDVLLSHCLFTTAENILESSNNL 349
           K Q  NP  AL FF WASN  PNPNNY H  +CY AIID+LLSH LF  A+N+LE     
Sbjct: 68  KEQQPNPYQALFFFNWASNLNPNPNNYSHNHRCYVAIIDLLLSHSLFPIAKNLLEKHGTF 127

Query: 350 GDFMIGKIIKAHGDRGSIRAAIYWLNRAKSIESYRCLFSYNSILGVLVRMNDISFARSIF 529
            D ++ K+I+A+G  G  ++AI+W ++ K I+  +CLFS+N+ILGVLV++N I+ A+S F
Sbjct: 128 SDLLVSKLIRAYGYSGDTKSAIFWFHKVKEIQQGKCLFSWNAILGVLVKVNQINVAKSFF 187

Query: 530 DEIVKEGVIRPDVSTYTTMIRGYCKLGMIEDAKRMFNGMCCKPNVFTYNTFVAGLCRKGE 709
           D+IV + V++PD STYTTMIRG+CK+GMI++A+++F+ M C+PN+ T NT + G C+KG+
Sbjct: 188 DQIVNDAVVKPDASTYTTMIRGFCKVGMIDNARKVFDEMICEPNLITCNTLINGYCKKGD 247

Query: 710 MKYAREIVDEMIVGKECLPDTVTFTTLIDGYCKQNQLEEAEKCMEEMVRRNCKLAECLYL 889
           M+ AR  +  M+  K+CLPDTVT++TLIDGYCK+ +L EA K M+ M+ R C      Y 
Sbjct: 248 MENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYN 307

Query: 890 QCIY 901
             IY
Sbjct: 308 AIIY 311



 Score =  258 bits (658), Expect = 6e-66
 Identities = 127/278 (45%), Positives = 187/278 (67%), Gaps = 3/278 (1%)
 Frame = +3

Query: 834  NAWKKWCGGTV---S*PNVYTYNAFIYGLCRNGKVEEAKRMMSKMRLNGLKDNVATHTNL 1004
            N  +KW  G +     PN++TYNA IYGLC  G V+EA+R+++KMRLNG+K+NVATH ++
Sbjct: 285  NEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNGVKENVATHLSI 344

Query: 1005 LKGLCIVGRSDDAANHLKEMISLGLKPDVKAYSVVIHDYCKLGKPTKGIVLLDEMKSRSM 1184
            LKGL + G+S++A  +  EMI  G+K D K + VVI  YCK+ KP + I LL EM+++ +
Sbjct: 345  LKGLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAISLLKEMQAKGI 404

Query: 1185 NPHVSCFNSLFRALCDLGEHDRAIRYLKEMPQSGSSPNFVSYSTVICKLCSVRGRMRDVE 1364
            +  V  FN++ R L ++GE D+A+  LK++   G  PN VSYSTVIC LC   GRM++V 
Sbjct: 405  SRSVGSFNAVLRILVEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQEVA 464

Query: 1365 DLVVNMHQKGLLPDTTMYSTMVRGYCQDDDIQMAIGVLREMIEKGIVIHRESFSVFVEKL 1544
             LV +M Q G   D T+YS +V G+C+  + +MA+    + I K  VI+ +SFS FV  +
Sbjct: 465  GLVDDMLQDGFEMDATLYSCLVGGFCEAGNEEMAMRAFYDSINKNYVINLQSFSFFVNLM 524

Query: 1545 CGNGKASEVKKLFEEMRKRCPVPDVDSYQSLVNENLCK 1658
            CG GK  E +++F++M +RC + DVDSYQ ++++ L K
Sbjct: 525  CGKGKVIEAEQIFKDMCRRCSLVDVDSYQRVLDDQLHK 562



 Score =  104 bits (259), Expect = 1e-19
 Identities = 70/257 (27%), Positives = 124/257 (48%), Gaps = 1/257 (0%)
 Frame = +3

Query: 873  PNVYTYNAFIYGLCRNGKVEEAKRMMSKMRLNGLKDNVATHTNLLKGLCIVGRSDDAANH 1052
            P+  TY   I G C+ G ++ A+++  +M     + N+ T   L+ G C  G  ++A   
Sbjct: 198  PDASTYTTMIRGFCKVGMIDNARKVFDEMI---CEPNLITCNTLINGYCKKGDMENARIF 254

Query: 1053 LKEMI-SLGLKPDVKAYSVVIHDYCKLGKPTKGIVLLDEMKSRSMNPHVSCFNSLFRALC 1229
            L  M+ S    PD   YS +I  YCK G+  +    +D M  R  NP++  +N++   LC
Sbjct: 255  LCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLC 314

Query: 1230 DLGEHDRAIRYLKEMPQSGSSPNFVSYSTVICKLCSVRGRMRDVEDLVVNMHQKGLLPDT 1409
              G  D A R L +M  +G   N  ++ +++ K  SV G+  +       M +KG+  D 
Sbjct: 315  LRGNVDEARRLLTKMRLNGVKENVATHLSIL-KGLSVAGKSEEAIGYFSEMIRKGMKLDA 373

Query: 1410 TMYSTMVRGYCQDDDIQMAIGVLREMIEKGIVIHRESFSVFVEKLCGNGKASEVKKLFEE 1589
              +  ++  YC+      AI +L+EM  KGI     SF+  +  L   G+  +   L ++
Sbjct: 374  KEHEVVITAYCKMRKPDEAISLLKEMQAKGISRSVGSFNAVLRILVEIGELDKAVLLLKQ 433

Query: 1590 MRKRCPVPDVDSYQSLV 1640
            ++    +P++ SY +++
Sbjct: 434  VKNMGCLPNLVSYSTVI 450



 Score = 95.5 bits (236), Expect = 5e-17
 Identities = 64/256 (25%), Positives = 125/256 (48%), Gaps = 2/256 (0%)
 Frame = +3

Query: 879  VYTYNAFIYGLCRNGKVEEAKRMMSKMRLNGL-KDNVATHTNLLKGLCIVGRSDDAANHL 1055
            ++++NA +  L +  ++  AK    ++  + + K + +T+T +++G C VG  D+A    
Sbjct: 164  LFSWNAILGVLVKVNQINVAKSFFDQIVNDAVVKPDASTYTTMIRGFCKVGMIDNARKVF 223

Query: 1056 KEMISLGLKPDVKAYSVVIHDYCKLGKPTKG-IVLLDEMKSRSMNPHVSCFNSLFRALCD 1232
             EMI    +P++   + +I+ YCK G      I L   M+S+   P    +++L    C 
Sbjct: 224  DEMI---CEPNLITCNTLINGYCKKGDMENARIFLCRMMESKDCLPDTVTYSTLIDGYCK 280

Query: 1233 LGEHDRAIRYLKEMPQSGSSPNFVSYSTVICKLCSVRGRMRDVEDLVVNMHQKGLLPDTT 1412
             GE + A +++  M   G +PN  +Y+ +I  LC +RG + +   L+  M   G+  +  
Sbjct: 281  KGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLC-LRGNVDEARRLLTKMRLNGVKENVA 339

Query: 1413 MYSTMVRGYCQDDDIQMAIGVLREMIEKGIVIHRESFSVFVEKLCGNGKASEVKKLFEEM 1592
             + ++++G       + AIG   EMI KG+ +  +   V +   C   K  E   L +EM
Sbjct: 340  THLSILKGLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAISLLKEM 399

Query: 1593 RKRCPVPDVDSYQSLV 1640
            + +     V S+ +++
Sbjct: 400  QAKGISRSVGSFNAVL 415


>ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like
            [Vitis vinifera]
          Length = 563

 Score =  279 bits (713), Expect = 3e-72
 Identities = 141/281 (50%), Positives = 191/281 (67%), Gaps = 19/281 (6%)
 Frame = +3

Query: 873  PNVYTYNAFIYGLCRNGKVE-------------------EAKRMMSKMRLNGLKDNVATH 995
            P+V TY   I G C+ G +E                   EAKRMM++MRLNGLKDNVATH
Sbjct: 251  PDVSTYTTIIRGYCKMGMIENAKNVFDEMGCKPNLGNVDEAKRMMTRMRLNGLKDNVATH 310

Query: 996  TNLLKGLCIVGRSDDAANHLKEMISLGLKPDVKAYSVVIHDYCKLGKPTKGIVLLDEMKS 1175
            T++LKGLC+VG+ DDAA HLKEM+ LG++ D KAY VV+++YCK+GK    I LL EMKS
Sbjct: 311  TSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKS 370

Query: 1176 RSMNPHVSCFNSLFRALCDLGEHDRAIRYLKEMPQSGSSPNFVSYSTVICKLCSVRGRMR 1355
            R +NP VS FN++FR L + G+ D+A   L++M Q G +PNF+SYSTVI  LC  +GRM 
Sbjct: 371  RGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMH 430

Query: 1356 DVEDLVVNMHQKGLLPDTTMYSTMVRGYCQDDDIQMAIGVLREMIEKGIVIHRESFSVFV 1535
            +VE+ V +M + G   D +MYS +V+GYC+D +  MA+ +  EM++ G VI+ ESF  FV
Sbjct: 431  EVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFV 490

Query: 1536 EKLCGNGKASEVKKLFEEMRKRCPVPDVDSYQSLVNENLCK 1658
            + L    KA EV+K FEEM +RCP  D+  Y+ +++E+LCK
Sbjct: 491  KGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRILDEHLCK 531



 Score =  270 bits (691), Expect = 9e-70
 Identities = 145/298 (48%), Positives = 194/298 (65%), Gaps = 28/298 (9%)
 Frame = +2

Query: 50  ILPLITSINSVLQTLIHPNP------NYSQLNQFSLNLNPNLVIEVIKTQTNPQNALNFF 211
           +L   +SI S LQTL   NP      + S L+QF+  LNP+LVI+VIK+Q NP +AL FF
Sbjct: 75  LLSTASSITSFLQTLNPQNPTPNSPTSISPLSQFAPFLNPSLVIQVIKSQKNPYHALFFF 134

Query: 212 KWASNPCPNPNNYFHTFQCYNAIIDVLLSHCLFTTAENILESSNNLGDFMIGKIIKAHGD 391
            WASNP PNPNNY H+  CY AI D+L+SH LF+TA ++L+S + L DF   K +KA+GD
Sbjct: 135 NWASNPNPNPNNYSHSHLCYVAITDLLISHGLFSTASSLLQSHHRLSDFAAAKFVKAYGD 194

Query: 392 RGSIRAAIYWLNRAKSIESYRCLFSYNSILGVLVRMNDISFARSIFDEIVKEGVIRPDVS 571
           RG IR AI+W +RAK +ES RCLFSYN+ILGV V+ N I  AR++FD+IVKEGV++PDVS
Sbjct: 195 RGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVS 254

Query: 572 TYTTMIRGYCKLGMIEDAKRMFNGMCCKP----------------------NVFTYNTFV 685
           TYTT+IRGYCK+GMIE+AK +F+ M CKP                      NV T+ + +
Sbjct: 255 TYTTIIRGYCKMGMIENAKNVFDEMGCKPNLGNVDEAKRMMTRMRLNGLKDNVATHTSIL 314

Query: 686 AGLCRKGEMKYAREIVDEMIVGKECLPDTVTFTTLIDGYCKQNQLEEAEKCMEEMVRR 859
            GLC  G++  A   + EM VG     D   +  +++ YCK  + ++A   ++EM  R
Sbjct: 315 KGLCVVGKLDDAARHLKEM-VGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSR 371


>ref|XP_003523650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690-like
            [Glycine max]
          Length = 472

 Score =  270 bits (689), Expect = 2e-69
 Identities = 133/268 (49%), Positives = 183/268 (68%), Gaps = 24/268 (8%)
 Frame = +3

Query: 873  PNVYTYNAFIYGLCRNGKVE------------------------EAKRMMSKMRLNGLKD 980
            P+VYTY   I G C+ GKVE                        EA++MMS+MRLNGLKD
Sbjct: 194  PDVYTYTTMIRGFCKVGKVESARKVFDEMRCEPNIVTYNTGEVDEARKMMSRMRLNGLKD 253

Query: 981  NVATHTNLLKGLCIVGRSDDAANHLKEMISLGLKPDVKAYSVVIHDYCKLGKPTKGIVLL 1160
            +VAT+T+LLKG CIVG+SD+A  HL+EM+S G+KPDVKAY VV+++YCK+ KP++ ++LL
Sbjct: 254  DVATNTSLLKGFCIVGKSDEAVKHLREMVSRGMKPDVKAYGVVVNEYCKIRKPSEAVLLL 313

Query: 1161 DEMKSRSMNPHVSCFNSLFRALCDLGEHDRAIRYLKEMPQSGSSPNFVSYSTVICKLCSV 1340
             EM  R + P+VS FN++FR L D G+ D  +  LK+MP+ G SPNF+SY TVIC LC V
Sbjct: 314  REMVVRGVKPNVSSFNAVFRVLVDEGKIDEGLHLLKQMPKMGCSPNFLSYCTVICGLCEV 373

Query: 1341 RGRMRDVEDLVVNMHQKGLLPDTTMYSTMVRGYCQDDDIQMAIGVLREMIEKGIVIHRES 1520
            +GRM+ VE+LV NM Q G   D TMY+ ++ GYC+D D +MA   + ++++K  VI+++ 
Sbjct: 374  KGRMQQVEELVSNMLQNGHNLDATMYNCLLLGYCEDRDEEMAQKTVYDIMDKNFVINQDI 433

Query: 1521 FSVFVEKLCGNGKASEVKKLFEEMRKRC 1604
            F  FV+ LC  GK  E + + EEMR+RC
Sbjct: 434  FCTFVKLLCAKGKLKEAETVSEEMRRRC 461



 Score =  268 bits (686), Expect = 4e-69
 Identities = 136/281 (48%), Positives = 189/281 (67%)
 Frame = +2

Query: 26  TQNTNPNSILPLITSINSVLQTLIHPNPNYSQLNQFSLNLNPNLVIEVIKTQTNPQNALN 205
           + +T P   L L+T I ++LQ +   NP+YS L +FS +L PNLVI VIK Q NPQ+AL+
Sbjct: 16  SSSTAPIPNLSLVTCITTILQNINPQNPDYSPLREFSSHLTPNLVIHVIKNQNNPQHALH 75

Query: 206 FFKWASNPCPNPNNYFHTFQCYNAIIDVLLSHCLFTTAENILESSNNLGDFMIGKIIKAH 385
           FF WASNP PNPNNY HT  CY AI D+LLSH LF+TA ++L  SN L D ++ + I A 
Sbjct: 76  FFNWASNPNPNPNNYSHTPLCYTAITDLLLSHSLFSTAFSLLRHSNRLSDNLVCRFINAL 135

Query: 386 GDRGSIRAAIYWLNRAKSIESYRCLFSYNSILGVLVRMNDISFARSIFDEIVKEGVIRPD 565
           G RG IR AI+W ++A +    RC+FS N+ILGVLVR N ++ A++I+D+++ E V+ PD
Sbjct: 136 GHRGDIRGAIHWFHQANTFTRGRCVFSCNAILGVLVRANRVNIAKAIYDQVLAEAVLEPD 195

Query: 566 VSTYTTMIRGYCKLGMIEDAKRMFNGMCCKPNVFTYNTFVAGLCRKGEMKYAREIVDEMI 745
           V TYTTMIRG+CK+G +E A+++F+ M C+PN+ TYNT        GE+  AR+++  M 
Sbjct: 196 VYTYTTMIRGFCKVGKVESARKVFDEMRCEPNIVTYNT--------GEVDEARKMMSRMR 247

Query: 746 VGKECLPDTVTFTTLIDGYCKQNQLEEAEKCMEEMVRRNCK 868
           +      D  T T+L+ G+C   + +EA K + EMV R  K
Sbjct: 248 L-NGLKDDVATNTSLLKGFCIVGKSDEAVKHLREMVSRGMK 287



 Score = 75.5 bits (184), Expect = 6e-11
 Identities = 53/195 (27%), Positives = 94/195 (48%)
 Frame = +3

Query: 1077 LKPDVKAYSVVIHDYCKLGKPTKGIVLLDEMKSRSMNPHVSCFNSLFRALCDLGEHDRAI 1256
            L+PDV  Y+ +I  +CK+GK      + DEM+     P++  +N+        GE D A 
Sbjct: 192  LEPDVYTYTTMIRGFCKVGKVESARKVFDEMRCE---PNIVTYNT--------GEVDEAR 240

Query: 1257 RYLKEMPQSGSSPNFVSYSTVICKLCSVRGRMRDVEDLVVNMHQKGLLPDTTMYSTMVRG 1436
            + +  M  +G   +  + ++++   C V G+  +    +  M  +G+ PD   Y  +V  
Sbjct: 241  KMMSRMRLNGLKDDVATNTSLLKGFCIV-GKSDEAVKHLREMVSRGMKPDVKAYGVVVNE 299

Query: 1437 YCQDDDIQMAIGVLREMIEKGIVIHRESFSVFVEKLCGNGKASEVKKLFEEMRKRCPVPD 1616
            YC+      A+ +LREM+ +G+  +  SF+     L   GK  E   L ++M K    P+
Sbjct: 300  YCKIRKPSEAVLLLREMVVRGVKPNVSSFNAVFRVLVDEGKIDEGLHLLKQMPKMGCSPN 359

Query: 1617 VDSYQSLVNENLCKV 1661
              SY +++   LC+V
Sbjct: 360  FLSYCTVIC-GLCEV 373