BLASTX nr result
ID: Coptis24_contig00016525
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00016525
(528 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4... 135 3e-33
ref|XP_004136172.1| PREDICTED: ABC transporter C family member 4... 136 3e-33
emb|CBI36841.3| unnamed protein product [Vitis vinifera] 135 3e-33
ref|XP_002301476.1| multidrug resistance protein ABC transporter... 135 5e-33
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6... 130 1e-31
>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
Length = 1509
Score = 135 bits (341), Expect(2) = 3e-33
Identities = 85/184 (46%), Positives = 106/184 (57%), Gaps = 24/184 (13%)
Frame = +2
Query: 44 KLVRAVYQDCDMYLLDDVFSAVDAHIGSELFKEHARAALKNKTILLVTHQVEYLHNTNLI 223
+L RAVYQDCD+YLLDDVFSAVDAH G+++FKE R AL+NKTILLVTHQV++LHN +LI
Sbjct: 777 QLARAVYQDCDVYLLDDVFSAVDAHTGTDIFKECVRGALRNKTILLVTHQVDFLHNVDLI 836
Query: 224 LV----VIVQSGKYS---------LNLVQILELLLRHIKRPWN*LT*TILRIFLNHQ*HR 364
LV +IVQSGKY+ LV E + ++ +T
Sbjct: 837 LVMRDGMIVQSGKYNDLLESGMDFKALVAAHETSMELVEEAGPAIT-------------S 883
Query: 365 NQLVHTPKSPMVEVSH-----------HSEFEKGTSKFIEDGERETGHVSFRVYKTYSIE 511
P+SP +H S+ K +SK I+D ERETG VSF+VYK Y E
Sbjct: 884 ENSPKLPQSPQPFSNHGEANGVDKSGDQSKSNKESSKLIKDEERETGKVSFQVYKQYCTE 943
Query: 512 AYGW 523
AYGW
Sbjct: 944 AYGW 947
Score = 31.2 bits (69), Expect(2) = 3e-33
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 1 ERGINLSSGQKQRIQ 45
ERGINLS GQKQRIQ
Sbjct: 763 ERGINLSGGQKQRIQ 777
>ref|XP_004136172.1| PREDICTED: ABC transporter C family member 4-like [Cucumis sativus]
Length = 1499
Score = 136 bits (342), Expect(2) = 3e-33
Identities = 80/167 (47%), Positives = 102/167 (61%), Gaps = 7/167 (4%)
Frame = +2
Query: 44 KLVRAVYQDCDMYLLDDVFSAVDAHIGSELFKEHARAALKNKTILLVTHQVEYLHNTNLI 223
+L RAVYQDCD+YLLDDVFSAVDAH GSE+FKE R LK+KT++LVTHQV++LHN +LI
Sbjct: 772 QLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKECVRGILKDKTVILVTHQVDFLHNVDLI 831
Query: 224 LV----VIVQSGKYS--LNLVQILELLLRHIKRPWN*LT*TILRIFLNHQ-*HRNQLVHT 382
LV +IVQSGKY+ L E L+ + + + N R+ H+
Sbjct: 832 LVMRDGMIVQSGKYNDLLRTQTDFEALVAAHETSMEAVESSTTEAVDNRTLLRRSSSKHS 891
Query: 383 PKSPMVEVSHHSEFEKGTSKFIEDGERETGHVSFRVYKTYSIEAYGW 523
S V +K +SK I+D ERETG V + VYK Y EA+GW
Sbjct: 892 EASGKNNVVDKPNMDKASSKLIQDEERETGRVGWEVYKVYCTEAFGW 938
Score = 30.8 bits (68), Expect(2) = 3e-33
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 1 ERGINLSSGQKQRIQ 45
ERGINLS GQKQR+Q
Sbjct: 758 ERGINLSGGQKQRVQ 772
>emb|CBI36841.3| unnamed protein product [Vitis vinifera]
Length = 1079
Score = 135 bits (341), Expect(2) = 3e-33
Identities = 85/184 (46%), Positives = 106/184 (57%), Gaps = 24/184 (13%)
Frame = +2
Query: 44 KLVRAVYQDCDMYLLDDVFSAVDAHIGSELFKEHARAALKNKTILLVTHQVEYLHNTNLI 223
+L RAVYQDCD+YLLDDVFSAVDAH G+++FKE R AL+NKTILLVTHQV++LHN +LI
Sbjct: 347 QLARAVYQDCDVYLLDDVFSAVDAHTGTDIFKECVRGALRNKTILLVTHQVDFLHNVDLI 406
Query: 224 LV----VIVQSGKYS---------LNLVQILELLLRHIKRPWN*LT*TILRIFLNHQ*HR 364
LV +IVQSGKY+ LV E + ++ +T
Sbjct: 407 LVMRDGMIVQSGKYNDLLESGMDFKALVAAHETSMELVEEAGPAIT-------------S 453
Query: 365 NQLVHTPKSPMVEVSH-----------HSEFEKGTSKFIEDGERETGHVSFRVYKTYSIE 511
P+SP +H S+ K +SK I+D ERETG VSF+VYK Y E
Sbjct: 454 ENSPKLPQSPQPFSNHGEANGVDKSGDQSKSNKESSKLIKDEERETGKVSFQVYKQYCTE 513
Query: 512 AYGW 523
AYGW
Sbjct: 514 AYGW 517
Score = 31.2 bits (69), Expect(2) = 3e-33
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 1 ERGINLSSGQKQRIQ 45
ERGINLS GQKQRIQ
Sbjct: 333 ERGINLSGGQKQRIQ 347
>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
resistance protein ABC transporter family [Populus
trichocarpa]
Length = 1508
Score = 135 bits (339), Expect(2) = 5e-33
Identities = 82/178 (46%), Positives = 107/178 (60%), Gaps = 18/178 (10%)
Frame = +2
Query: 44 KLVRAVYQDCDMYLLDDVFSAVDAHIGSELFKEHARAALKNKTILLVTHQVEYLHNTNLI 223
+L RAVYQDCD+YLLDDVFSAVDAH G+++FKE R ALK KTILLVTHQV++LHN +LI
Sbjct: 777 QLARAVYQDCDIYLLDDVFSAVDAHTGTDIFKECVRGALKGKTILLVTHQVDFLHNVDLI 836
Query: 224 LVV----IVQSGKYSLNLVQILE---LLLRHIKRPWN*LT*TILRIFLNHQ*HRNQLVHT 382
V+ IVQSGKY+ LV L+ L+ H ++ + + +
Sbjct: 837 SVMRDGQIVQSGKYNDLLVSGLDFGALVAAHDT--------SMELVEASSEISSENSPRP 888
Query: 383 PKSPM-----------VEVSHHSEFEKGTSKFIEDGERETGHVSFRVYKTYSIEAYGW 523
PKSP ++ H + +KGTSK IE+ ER TG++ VYK Y EA+GW
Sbjct: 889 PKSPRGPSKLGEANGENKLLDHPKSDKGTSKLIEEEERATGNIGLHVYKQYCTEAFGW 946
Score = 31.2 bits (69), Expect(2) = 5e-33
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 1 ERGINLSSGQKQRIQ 45
ERGINLS GQKQRIQ
Sbjct: 763 ERGINLSGGQKQRIQ 777
>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
abc-transoprter, putative [Ricinus communis]
gi|223537625|gb|EEF39248.1| multidrug
resistance-associated protein 2, 6 (mrp2, 6),
abc-transoprter, putative [Ricinus communis]
Length = 1506
Score = 130 bits (326), Expect(2) = 1e-31
Identities = 84/178 (47%), Positives = 106/178 (59%), Gaps = 18/178 (10%)
Frame = +2
Query: 44 KLVRAVYQDCDMYLLDDVFSAVDAHIGSELFKEHARAALKNKTILLVTHQVEYLHNTNLI 223
+L RAVYQDCD+YLLDDVFSAVDAH GS++FKE R ALK KTILLVTHQV++LHN +LI
Sbjct: 775 QLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTILLVTHQVDFLHNIDLI 834
Query: 224 LV----VIVQSGKYSLNLVQ--------------ILELLLRHIKRPWN*LT*TILRIFLN 349
+V +IVQSGKY+ NLV+ +EL+ P R +
Sbjct: 835 MVMRDGMIVQSGKYN-NLVKSGMDFGALVAAHDTAMELVEAGTAVPGE----NSPRPPKS 889
Query: 350 HQ*HRNQLVHTPKSPMVEVSHHSEFEKGTSKFIEDGERETGHVSFRVYKTYSIEAYGW 523
Q N L ++ ++ + EKGTSK +E+ ERETG V VYK Y A+GW
Sbjct: 890 PQSSSNALEANGENKHLD---QPKSEKGTSKLVEEEERETGKVGLHVYKQYCTAAFGW 944
Score = 31.2 bits (69), Expect(2) = 1e-31
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 1 ERGINLSSGQKQRIQ 45
ERGINLS GQKQRIQ
Sbjct: 761 ERGINLSGGQKQRIQ 775