BLASTX nr result

ID: Coptis24_contig00016508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016508
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35826.3| unnamed protein product [Vitis vinifera]              334   2e-89
ref|XP_002271999.1| PREDICTED: uncharacterized protein LOC100251...   334   2e-89
ref|XP_002304238.1| predicted protein [Populus trichocarpa] gi|2...   291   1e-76
ref|XP_003529847.1| PREDICTED: uncharacterized protein LOC100812...   288   1e-75
ref|XP_004141819.1| PREDICTED: uncharacterized protein LOC101213...   264   2e-68

>emb|CBI35826.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  334 bits (856), Expect = 2e-89
 Identities = 177/268 (66%), Positives = 197/268 (73%), Gaps = 5/268 (1%)
 Frame = +2

Query: 11   TVGDSTDSDNEKPGVSKESSKSGDPESDNGEILRSLGVGDPDSVDEVAVVVPSMFHTSVG 190
            T  D TD DN KP +S ES KSG+ ES+NG+ LRSL   DP SV E+ V VPS FHT +G
Sbjct: 897  TAEDGTDMDNGKPRLSHESDKSGNSESENGDTLRSLSQVDPASVAELPVAVPSAFHT-IG 955

Query: 191  PVQDSQGESPSSWNSRGRHPFAYAQEMSDNDAFVDSPMGSPASWNSHSLTQMEADAARMR 370
             VQ+S GESP SWNSR  H F+Y  E SD DA VDSP+GSPASWNSHSLTQ EADAARMR
Sbjct: 956  SVQESPGESPVSWNSRMHHSFSYPNETSDIDASVDSPIGSPASWNSHSLTQTEADAARMR 1015

Query: 371  KKWGSAQKTILLSNTSNHQTRKDVTKGFKRLLKFGRKNRGTEGLVDWISAXXXXXXXXXX 550
            KKWGSAQK IL++N+S++Q+RKDVTKGFKRLLKFGRK+RGTE LVDWISA          
Sbjct: 1016 KKWGSAQKPILVANSSHNQSRKDVTKGFKRLLKFGRKHRGTESLVDWISATTSEGDDDTE 1075

Query: 551  XXXXVANRSSEDLRKSRMGFPH-----DGFNDGELFNEQVQALRSSIPTPPANFKLREEH 715
                 ANRSSEDLRKSRMGF       D FN+ ELFNE VQAL SSIP PPANFKLRE+H
Sbjct: 1076 DGRDPANRSSEDLRKSRMGFSQGHPSDDSFNESELFNEHVQALHSSIPAPPANFKLREDH 1135

Query: 716  LSGSSLKAPXXXXXXXXXXXKGSEAKPR 799
            LSGSSLKAP           KGS++KPR
Sbjct: 1136 LSGSSLKAPRSFFSLSSFRSKGSDSKPR 1163


>ref|XP_002271999.1| PREDICTED: uncharacterized protein LOC100251482 [Vitis vinifera]
          Length = 1409

 Score =  334 bits (856), Expect = 2e-89
 Identities = 177/268 (66%), Positives = 197/268 (73%), Gaps = 5/268 (1%)
 Frame = +2

Query: 11   TVGDSTDSDNEKPGVSKESSKSGDPESDNGEILRSLGVGDPDSVDEVAVVVPSMFHTSVG 190
            T  D TD DN KP +S ES KSG+ ES+NG+ LRSL   DP SV E+ V VPS FHT +G
Sbjct: 1143 TAEDGTDMDNGKPRLSHESDKSGNSESENGDTLRSLSQVDPASVAELPVAVPSAFHT-IG 1201

Query: 191  PVQDSQGESPSSWNSRGRHPFAYAQEMSDNDAFVDSPMGSPASWNSHSLTQMEADAARMR 370
             VQ+S GESP SWNSR  H F+Y  E SD DA VDSP+GSPASWNSHSLTQ EADAARMR
Sbjct: 1202 SVQESPGESPVSWNSRMHHSFSYPNETSDIDASVDSPIGSPASWNSHSLTQTEADAARMR 1261

Query: 371  KKWGSAQKTILLSNTSNHQTRKDVTKGFKRLLKFGRKNRGTEGLVDWISAXXXXXXXXXX 550
            KKWGSAQK IL++N+S++Q+RKDVTKGFKRLLKFGRK+RGTE LVDWISA          
Sbjct: 1262 KKWGSAQKPILVANSSHNQSRKDVTKGFKRLLKFGRKHRGTESLVDWISATTSEGDDDTE 1321

Query: 551  XXXXVANRSSEDLRKSRMGFPH-----DGFNDGELFNEQVQALRSSIPTPPANFKLREEH 715
                 ANRSSEDLRKSRMGF       D FN+ ELFNE VQAL SSIP PPANFKLRE+H
Sbjct: 1322 DGRDPANRSSEDLRKSRMGFSQGHPSDDSFNESELFNEHVQALHSSIPAPPANFKLREDH 1381

Query: 716  LSGSSLKAPXXXXXXXXXXXKGSEAKPR 799
            LSGSSLKAP           KGS++KPR
Sbjct: 1382 LSGSSLKAPRSFFSLSSFRSKGSDSKPR 1409


>ref|XP_002304238.1| predicted protein [Populus trichocarpa] gi|222841670|gb|EEE79217.1|
            predicted protein [Populus trichocarpa]
          Length = 1250

 Score =  291 bits (746), Expect = 1e-76
 Identities = 152/239 (63%), Positives = 176/239 (73%), Gaps = 5/239 (2%)
 Frame = +2

Query: 35   DNEKPGVSKESSKSGDPESDNGEILRSLGVGDPDSVDEVAVVVPSMFHTSVGPVQDSQGE 214
            DN K  +S++S K G   S+NG+ LRS+   DP SV E+A  VPS FH ++G +QDS GE
Sbjct: 992  DNGKLRLSQDSDKIGMSGSENGDSLRSISQIDPSSVSELAASVPSTFH-ALGSLQDSPGE 1050

Query: 215  SPSSWNSRGRHPFAYAQEMSDNDAFVDSPMGSPASWNSHSLTQMEADAARMRKKWGSAQK 394
            SP SWNSR  HPF+Y  E SD DA+VDSP+GSPASWNSHSL Q E DAARMRKKWGSAQK
Sbjct: 1051 SPVSWNSRMHHPFSYPHETSDIDAYVDSPIGSPASWNSHSLIQRETDAARMRKKWGSAQK 1110

Query: 395  TILLSNTSNHQTRKDVTKGFKRLLKFGRKNRGTEGLVDWISAXXXXXXXXXXXXXXVANR 574
             IL++N+ N+Q+RKDVTKGFKRLLKFGRK+RG E LVDWISA               ANR
Sbjct: 1111 PILVANSFNNQSRKDVTKGFKRLLKFGRKSRGAESLVDWISATTSEGDDDTEDGRDPANR 1170

Query: 575  SSEDLRKSRMGFPH-----DGFNDGELFNEQVQALRSSIPTPPANFKLREEHLSGSSLK 736
            SSEDLRKSRMGF H     DG N+ ELFNEQV  L SSIP PP NFKLR++ +SGSS+K
Sbjct: 1171 SSEDLRKSRMGFSHGHPSDDGLNESELFNEQVHTLNSSIPAPPENFKLRDDLMSGSSIK 1229


>ref|XP_003529847.1| PREDICTED: uncharacterized protein LOC100812963 [Glycine max]
          Length = 1249

 Score =  288 bits (737), Expect = 1e-75
 Identities = 155/267 (58%), Positives = 185/267 (69%), Gaps = 5/267 (1%)
 Frame = +2

Query: 14   VGDSTDSDNEKPGVSKESSKSGDPESDNGEILRSLGVGDPDSVDEVAVVVPSMFHTSVGP 193
            + D   ++N K  +S+ES KSG+  S+ G+  RSL   DP S  E+A   PS F+  V  
Sbjct: 984  IKDVAYNNNGKVSLSQESGKSGNSGSEIGDSTRSLAQVDPISGGEMATGFPSTFN-GVRS 1042

Query: 194  VQDSQGESPSSWNSRGRHPFAYAQEMSDNDAFVDSPMGSPASWNSHSLTQMEADAARMRK 373
            +QDS   SP SWNSR  HPF+Y  E SD DA +DSP+GSPASWNSHSL Q + DAARMRK
Sbjct: 1043 LQDSPVGSPVSWNSRVPHPFSYPHESSDIDASIDSPIGSPASWNSHSLNQGDNDAARMRK 1102

Query: 374  KWGSAQKTILLSNTSNHQTRKDVTKGFKRLLKFGRKNRGTEGLVDWISAXXXXXXXXXXX 553
            KWGSAQK  L++N+S +Q RKDVTKGFKRLLKFGRK RG+E L DWISA           
Sbjct: 1103 KWGSAQKPFLVANSSQNQPRKDVTKGFKRLLKFGRKTRGSESLADWISATTSEGDDDTED 1162

Query: 554  XXXVANRSSEDLRKSRMGFPH-----DGFNDGELFNEQVQALRSSIPTPPANFKLREEHL 718
               +ANRSSEDLRKSRMGF H     D FN+ ELFNEQVQ+L+SSIP PPA+FKLR++H+
Sbjct: 1163 GRDLANRSSEDLRKSRMGFSHGHPSDDSFNENELFNEQVQSLQSSIPAPPAHFKLRDDHI 1222

Query: 719  SGSSLKAPXXXXXXXXXXXKGSEAKPR 799
            SGSSLKAP           KGS++KPR
Sbjct: 1223 SGSSLKAPKSFFSLSTFRSKGSDSKPR 1249


>ref|XP_004141819.1| PREDICTED: uncharacterized protein LOC101213033 [Cucumis sativus]
            gi|449480667|ref|XP_004155962.1| PREDICTED:
            uncharacterized LOC101213033 [Cucumis sativus]
          Length = 1411

 Score =  264 bits (675), Expect = 2e-68
 Identities = 146/260 (56%), Positives = 178/260 (68%), Gaps = 5/260 (1%)
 Frame = +2

Query: 35   DNEKPGVSKESSKSGDPESDNGEILRSLGVG--DPDSVDEVAVVVPSMFHTSVGPVQDSQ 208
            DN K  +S+ES +S +  S+    +RS      D  ++ E+  ++PS FH + G +QDS 
Sbjct: 1155 DNGKLRLSQESGRSSNSGSEIENSMRSHSHSRVDHSTISELPSMLPS-FHKA-GLLQDSP 1212

Query: 209  GESPSSWNSRGRHPFAYAQEMSDNDAFVDSPMGSPASWNSHSLTQMEADAARMRKKWGSA 388
            GESP +WNSR  HPFAY  E SD DA++DSP+GSPASWNSH++TQ E D ARMRKKWGSA
Sbjct: 1213 GESPLAWNSRMHHPFAYPHEASDIDAYMDSPIGSPASWNSHNITQAETDVARMRKKWGSA 1272

Query: 389  QKTILLSNTSNHQTRKDVTKGFKRLLKFGRKNRGTEGLVDWISAXXXXXXXXXXXXXXVA 568
            QK  L++ TS+ Q RKD+ KGFKRLLKFGRK+RGTE +VDWISA               A
Sbjct: 1273 QKPSLIA-TSSSQPRKDMAKGFKRLLKFGRKSRGTESMVDWISATTSEGDDDTEDGRDPA 1331

Query: 569  NRSSEDLRKSRMGFPH---DGFNDGELFNEQVQALRSSIPTPPANFKLREEHLSGSSLKA 739
            +RSSEDLRKSRMGF     DGFN+ EL+ EQVQ L SSIP PPANFKLRE+H+SGSSLKA
Sbjct: 1332 SRSSEDLRKSRMGFSEGHDDGFNENELYCEQVQELHSSIPAPPANFKLREDHMSGSSLKA 1391

Query: 740  PXXXXXXXXXXXKGSEAKPR 799
            P           KG++A  R
Sbjct: 1392 PRSFFSLSTFRSKGTDATSR 1411


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