BLASTX nr result

ID: Coptis24_contig00016498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016498
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633838.1| PREDICTED: ABC transporter B family member 1...   171   4e-41
emb|CBI35014.3| unnamed protein product [Vitis vinifera]              171   4e-41
ref|XP_003618399.1| ABC transporter B family member [Medicago tr...   166   2e-39
ref|XP_003618412.1| ABC transporter B family member [Medicago tr...   164   5e-39
ref|XP_003618396.1| ABC transporter B family member [Medicago tr...   162   3e-38

>ref|XP_003633838.1| PREDICTED: ABC transporter B family member 15-like [Vitis vinifera]
          Length = 1242

 Score =  171 bits (434), Expect = 4e-41
 Identities = 87/146 (59%), Positives = 99/146 (67%)
 Frame = +2

Query: 2   FAVLLIIPGLMYGRILMGLTRKIREEYNKAGSVVEQAISSIRTVYSFVGENKTMTEFSEA 181
           F V+L+IPGLMYGR LMGL R IREEYNKAG++ EQAISSIRTVYSFVGE+KT ++FS A
Sbjct: 181 FVVVLVIPGLMYGRTLMGLARTIREEYNKAGTIAEQAISSIRTVYSFVGESKTRSDFSAA 240

Query: 182 LQGSVXXXXXXXXXXXXXXXSTAITFVVWSFMSWYGSRLVMYHQGKGGTVFAVXXXXXXX 361
           LQGSV               S  I F +WSFMSWYGSR+VMYH  +GGTVF V       
Sbjct: 241 LQGSVKLGLRQGLAKGLAIGSNGIVFAIWSFMSWYGSRMVMYHGARGGTVFVVGAAIAVG 300

Query: 362 XXXXXXXXXNVKYFSEAVSAAERVME 439
                    N+KYFSEA SA ER+ME
Sbjct: 301 GLSLGAGLSNLKYFSEACSAGERIME 326


>emb|CBI35014.3| unnamed protein product [Vitis vinifera]
          Length = 1216

 Score =  171 bits (434), Expect = 4e-41
 Identities = 87/146 (59%), Positives = 99/146 (67%)
 Frame = +2

Query: 2   FAVLLIIPGLMYGRILMGLTRKIREEYNKAGSVVEQAISSIRTVYSFVGENKTMTEFSEA 181
           F V+L+IPGLMYGR LMGL R IREEYNKAG++ EQAISSIRTVYSFVGE+KT ++FS A
Sbjct: 156 FVVVLVIPGLMYGRTLMGLARTIREEYNKAGTIAEQAISSIRTVYSFVGESKTRSDFSAA 215

Query: 182 LQGSVXXXXXXXXXXXXXXXSTAITFVVWSFMSWYGSRLVMYHQGKGGTVFAVXXXXXXX 361
           LQGSV               S  I F +WSFMSWYGSR+VMYH  +GGTVF V       
Sbjct: 216 LQGSVKLGLRQGLAKGLAIGSNGIVFAIWSFMSWYGSRMVMYHGARGGTVFVVGAAIAVG 275

Query: 362 XXXXXXXXXNVKYFSEAVSAAERVME 439
                    N+KYFSEA SA ER+ME
Sbjct: 276 GLSLGAGLSNLKYFSEACSAGERIME 301


>ref|XP_003618399.1| ABC transporter B family member [Medicago truncatula]
           gi|355493414|gb|AES74617.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 489

 Score =  166 bits (420), Expect = 2e-39
 Identities = 83/146 (56%), Positives = 99/146 (67%)
 Frame = +2

Query: 2   FAVLLIIPGLMYGRILMGLTRKIREEYNKAGSVVEQAISSIRTVYSFVGENKTMTEFSEA 181
           F VLL+IPG MYGR+ MGL RKIREEYNKAG++ EQAISSIRTVYSF GE+KT+  FSEA
Sbjct: 134 FVVLLVIPGFMYGRVSMGLARKIREEYNKAGTIAEQAISSIRTVYSFAGESKTIDAFSEA 193

Query: 182 LQGSVXXXXXXXXXXXXXXXSTAITFVVWSFMSWYGSRLVMYHQGKGGTVFAVXXXXXXX 361
           L+GSV               S  + F +WSFM++YGSR+VMYH  KGGTV++V       
Sbjct: 194 LEGSVKLGLKQGLAKGLAIGSNGVNFAIWSFMAYYGSRMVMYHGAKGGTVYSVGFSLAIA 253

Query: 362 XXXXXXXXXNVKYFSEAVSAAERVME 439
                    NVKYFSEA +A ER+ME
Sbjct: 254 GSALGAGMSNVKYFSEASAAGERIME 279


>ref|XP_003618412.1| ABC transporter B family member [Medicago truncatula]
           gi|355493427|gb|AES74630.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 1279

 Score =  164 bits (416), Expect = 5e-39
 Identities = 84/146 (57%), Positives = 97/146 (66%)
 Frame = +2

Query: 2   FAVLLIIPGLMYGRILMGLTRKIREEYNKAGSVVEQAISSIRTVYSFVGENKTMTEFSEA 181
           F VLL+IPG MYGR LMGL RK+REEYN+AG++ EQAISSIRTVYSF GE+KT+  FS A
Sbjct: 194 FVVLLVIPGFMYGRTLMGLARKMREEYNQAGTIAEQAISSIRTVYSFAGESKTIAAFSNA 253

Query: 182 LQGSVXXXXXXXXXXXXXXXSTAITFVVWSFMSWYGSRLVMYHQGKGGTVFAVXXXXXXX 361
           L+GSV               S  + F +WSFMS+YGSR+VMYH  KGGTVFAV       
Sbjct: 254 LEGSVKLGLKQGLAKGLAIGSNGVVFAIWSFMSFYGSRMVMYHGAKGGTVFAVGASLALG 313

Query: 362 XXXXXXXXXNVKYFSEAVSAAERVME 439
                    NVKYFSEA  A ER+ME
Sbjct: 314 GLALGAGLSNVKYFSEASVAGERIME 339


>ref|XP_003618396.1| ABC transporter B family member [Medicago truncatula]
           gi|355493411|gb|AES74614.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 1275

 Score =  162 bits (410), Expect = 3e-38
 Identities = 83/146 (56%), Positives = 97/146 (66%)
 Frame = +2

Query: 2   FAVLLIIPGLMYGRILMGLTRKIREEYNKAGSVVEQAISSIRTVYSFVGENKTMTEFSEA 181
           F VLL+IPG MYGRI MGL RKIREEYNKAG++ +QAISSIRTVYSF GE+KT+  FS A
Sbjct: 191 FLVLLVIPGFMYGRISMGLARKIREEYNKAGTIAQQAISSIRTVYSFAGESKTIAAFSNA 250

Query: 182 LQGSVXXXXXXXXXXXXXXXSTAITFVVWSFMSWYGSRLVMYHQGKGGTVFAVXXXXXXX 361
           L+GSV               S  + F VWS MS+YGSR+VMYH  KGGTV++V       
Sbjct: 251 LEGSVKLGLKQGLAKGIGIGSNGLVFAVWSLMSYYGSRMVMYHGAKGGTVYSVGISITLG 310

Query: 362 XXXXXXXXXNVKYFSEAVSAAERVME 439
                    NVKYFSEA +A ER+ME
Sbjct: 311 GLAFGTSLSNVKYFSEASAAGERIME 336


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