BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016496
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   290   3e-76
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   289   5e-76
ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...   283   4e-74
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...   278   1e-72
ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|2...   265   1e-68

>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  290 bits (742), Expect = 3e-76
 Identities = 140/274 (51%), Positives = 199/274 (72%)
 Frame = +1

Query: 1   IEKAEAFMQQMKQLGYARSPHSYNVLLSLYSKVGRYEKLESLVEEMKVNGVHADKFTMSI 180
           +EKAEA MQ+M+ +G+ ++  SYNV+L LYS++G++EKL++L++EM+ NG+  D FT  I
Sbjct: 152 LEKAEAIMQEMRDMGFVKTL-SYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCI 210

Query: 181 QMAAYAANSNIDGMEKILQSMEVNPKIIMDWNSYAIAANGYIKIGCIDKALQTLKNSEKL 360
           ++ AY A S+++GMEK+L  +E +P +  DWN+Y +AANGY+K    +KA++ LK SE+ 
Sbjct: 211 RLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQF 270

Query: 361 ITGKQRRVAYDFLLTMYAGASSSKEDLYRIWKLYKSSEKLNNTSFLSMISSLLELDDIDG 540
           I+G+ RR  Y+ LLT+YA    +K ++YRIW LYK+  K  NT +++M+SSLL+LDD+DG
Sbjct: 271 ISGRSRRFGYEILLTLYA-TMGNKTEVYRIWNLYKTIGKFFNTGYVAMVSSLLKLDDMDG 329

Query: 541 AEKILKEWESEHTYFDFRVPNLLIAAYCKNGHLEKAEKLINMTIEKGEKPFLSSWDHLAT 720
           AEK  +EW S + +FDFRVPNLLI AYCK G LEKAE+L++  IE+GE+P   +WD LA 
Sbjct: 330 AEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAA 389

Query: 721 SYVEANQFPKALKALESAFLARWPKWTPNRDTLS 822
            Y E NQ  KA+  L+ A LA    W PN  TLS
Sbjct: 390 GYHENNQMEKAVDTLKKALLATSQGWKPNPVTLS 423


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  289 bits (740), Expect = 5e-76
 Identities = 140/274 (51%), Positives = 198/274 (72%)
 Frame = +1

Query: 1   IEKAEAFMQQMKQLGYARSPHSYNVLLSLYSKVGRYEKLESLVEEMKVNGVHADKFTMSI 180
           +EKAEA MQ+M+ +G+ ++  SYNV+L LYS++G++EKL++L++EM+ NG+  D FT  I
Sbjct: 152 LEKAEAIMQEMRDMGFVKTL-SYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCI 210

Query: 181 QMAAYAANSNIDGMEKILQSMEVNPKIIMDWNSYAIAANGYIKIGCIDKALQTLKNSEKL 360
           ++ AY A S+++GMEK+L  +E +P +  DWN+Y +AANGY+K    +KA++ LK SE+ 
Sbjct: 211 RLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQF 270

Query: 361 ITGKQRRVAYDFLLTMYAGASSSKEDLYRIWKLYKSSEKLNNTSFLSMISSLLELDDIDG 540
           I+G+ RR  Y+ LLT+YA    +K + YRIW LYK+  K  NT +++M+SSLL+LDD+DG
Sbjct: 271 ISGRSRRFGYEILLTLYA-TMGNKTEXYRIWNLYKTIGKFFNTGYVAMVSSLLKLDDMDG 329

Query: 541 AEKILKEWESEHTYFDFRVPNLLIAAYCKNGHLEKAEKLINMTIEKGEKPFLSSWDHLAT 720
           AEK  +EW S + +FDFRVPNLLI AYCK G LEKAE+L++  IE+GE+P   +WD LA 
Sbjct: 330 AEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAA 389

Query: 721 SYVEANQFPKALKALESAFLARWPKWTPNRDTLS 822
            Y E NQ  KA+  L+ A LA    W PN  TLS
Sbjct: 390 GYHENNQMEKAVDTLKKALLATSQGWKPNPVTLS 423


>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  283 bits (723), Expect = 4e-74
 Identities = 131/274 (47%), Positives = 197/274 (71%)
 Frame = +1

Query: 1   IEKAEAFMQQMKQLGYARSPHSYNVLLSLYSKVGRYEKLESLVEEMKVNGVHADKFTMSI 180
           ++KAEA MQ+++ LG+ R+   YN L+++Y ++G +EKL+ L+ EM+  G+  DKFT++I
Sbjct: 165 VDKAEAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFTLAI 224

Query: 181 QMAAYAANSNIDGMEKILQSMEVNPKIIMDWNSYAIAANGYIKIGCIDKALQTLKNSEKL 360
           +++AYAA SNI G++ I+  ME +P+II+DWNSYA+ A+GY+K+G +DK L  +K  E+L
Sbjct: 225 RLSAYAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDKTLVMMKKLEEL 284

Query: 361 ITGKQRRVAYDFLLTMYAGASSSKEDLYRIWKLYKSSEKLNNTSFLSMISSLLELDDIDG 540
           I  K   VA+D LL +YA  +  +++L R+W LYK  EK+ N  +++MISSLL+ DDID 
Sbjct: 285 IDAKGSNVAFDNLLKLYA-ETRQRDELDRVWMLYKKKEKIYNKGYMAMISSLLKFDDIDA 343

Query: 541 AEKILKEWESEHTYFDFRVPNLLIAAYCKNGHLEKAEKLINMTIEKGEKPFLSSWDHLAT 720
           AEK+L+EWES    +DFRVPN LI AYC+ G  EKAE L+N  + KG  P + +W +LA 
Sbjct: 344 AEKVLEEWESRRLSYDFRVPNFLIDAYCRKGLTEKAEALVNKILTKGGNPLVDTWFYLAN 403

Query: 721 SYVEANQFPKALKALESAFLARWPKWTPNRDTLS 822
            Y+E +Q PKA++AL+ A +   P W P+++TL+
Sbjct: 404 GYLEDSQIPKAVEALKKAVVVCPPNWKPSKNTLA 437


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  278 bits (711), Expect = 1e-72
 Identities = 136/272 (50%), Positives = 189/272 (69%)
 Frame = +1

Query: 7   KAEAFMQQMKQLGYARSPHSYNVLLSLYSKVGRYEKLESLVEEMKVNGVHADKFTMSIQM 186
           KAEA MQ+MK LG+ ++  SYNV+LSLYS +G YEKL+ LV+EM+ NG+  D+ T  I++
Sbjct: 158 KAEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRL 217

Query: 187 AAYAANSNIDGMEKILQSMEVNPKIIMDWNSYAIAANGYIKIGCIDKALQTLKNSEKLIT 366
            A   +S+I+GMEK+L  MEV+P I + +++Y IAANGY+K G +DK L  LK SE+LI+
Sbjct: 218 NACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLIS 277

Query: 367 GKQRRVAYDFLLTMYAGASSSKEDLYRIWKLYKSSEKLNNTSFLSMISSLLELDDIDGAE 546
           G  RR AY+FLLT+Y  AS +K ++YRIW  YK   +  N+ ++ MISSLL+LDDIDGAE
Sbjct: 278 GNTRRFAYEFLLTLYT-ASGNKAEVYRIWNKYKEIGRFFNSGYICMISSLLKLDDIDGAE 336

Query: 547 KILKEWESEHTYFDFRVPNLLIAAYCKNGHLEKAEKLINMTIEKGEKPFLSSWDHLATSY 726
           +I +EW+S+   FD R+PN ++  Y + GHLEKAE  IN  +  GE+P  +SW+HLA  Y
Sbjct: 337 RIFEEWDSKKVLFDIRIPNSMVNVYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAGY 396

Query: 727 VEANQFPKALKALESAFLARWPKWTPNRDTLS 822
             + Q  KA++ +  A     P W P+  TLS
Sbjct: 397 HSSGQMTKAVETIRKAISVSKPGWKPSLLTLS 428


>ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|222867379|gb|EEF04510.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  265 bits (676), Expect = 1e-68
 Identities = 129/275 (46%), Positives = 191/275 (69%), Gaps = 1/275 (0%)
 Frame = +1

Query: 1   IEKAEAFMQQMKQLGYARSPHSYNVLLSLYSKVGRYEKLESLVEEMKVNGVHADKFTMSI 180
           +EKAE+ +Q+MK LG+A +   YNV+L+ Y + G  +K+ SL++EM+ NG+  DKF  SI
Sbjct: 176 VEKAESVVQEMKSLGFANTLLVYNVILNFYYQTGNPDKINSLMQEMEQNGIGCDKFAHSI 235

Query: 181 QMAAYAANSNIDGMEKILQSMEVNPKIIMDWNSYAIAANGYIKIGCIDKALQTLKNSEKL 360
           Q++AYA+ S+I G+EK L  ME +P + +DW SY  AA GYIK+G +DKAL+ L+ SE+L
Sbjct: 236 QLSAYASVSDIVGIEKTLAKMESDPNVFLDWTSYTAAAKGYIKVGLVDKALEMLEKSERL 295

Query: 361 ITGKQRRVAYDFLLTMYAGASSSKEDLYRIWKLYKSSEKLNNTSFLSMISSLLELDDIDG 540
           +TGK+R  AYD L+T+YA    + E L RIW+LYK +EK+   +++S+I+SLL+LDD + 
Sbjct: 296 VTGKRRGTAYDSLITLYAATGKTNEVL-RIWELYKKNEKVYKEAYISIITSLLKLDDFEN 354

Query: 541 AEKILKEWE-SEHTYFDFRVPNLLIAAYCKNGHLEKAEKLINMTIEKGEKPFLSSWDHLA 717
           AEKI +EWE   H+ +D  +PN LI AY + G +EKAE LI+  I KG +P   +W HLA
Sbjct: 355 AEKIFEEWEFQNHSCYDIHIPNFLIDAYSRKGLVEKAETLIDRAISKGGEPNAKTWYHLA 414

Query: 718 TSYVEANQFPKALKALESAFLARWPKWTPNRDTLS 822
           T Y++  Q  KA++A++ A +     W P+ + L+
Sbjct: 415 TGYLQNGQTLKAVEAMKKAVVVSGRMWKPSNEILA 449