BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016495
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26
ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...   116   2e-24

>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/109 (50%), Positives = 85/109 (77%)
 Frame = +2

Query: 2   IEKAEALMQQMKQLGFARSPASYNVLLNLYSKVGQYDKLETLLEEMKENGVRANKLTMSI 181
           ++KA A MQ++K++GFA SP  YN+++NLY ++G++++L++LL+EMKE GV  ++ T SI
Sbjct: 146 VDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSI 205

Query: 182 QMAAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIKVGLIEK 328
           +++AYAA S+  G+EKI++ ME NP I++DW  Y  AA  Y KVGLI+K
Sbjct: 206 RISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDK 254


>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  123 bits (309), Expect = 1e-26
 Identities = 53/109 (48%), Positives = 84/109 (77%)
 Frame = +2

Query: 2   IEKAEALMQQMKQLGFARSPASYNVLLNLYSKVGQYDKLETLLEEMKENGVRANKLTMSI 181
           ++KAEA+MQ+++ LGF R+   YN L+N+Y ++G ++KL+ L+ EM+E G+  +K T++I
Sbjct: 165 VDKAEAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFTLAI 224

Query: 182 QMAAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIKVGLIEK 328
           +++AYAA SNI G++ I+  ME +P II+DW SYA  A GY+KVGL++K
Sbjct: 225 RLSAYAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDK 273


>ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|222867379|gb|EEF04510.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/109 (51%), Positives = 82/109 (75%)
 Frame = +2

Query: 2   IEKAEALMQQMKQLGFARSPASYNVLLNLYSKVGQYDKLETLLEEMKENGVRANKLTMSI 181
           +EKAE+++Q+MK LGFA +   YNV+LN Y + G  DK+ +L++EM++NG+  +K   SI
Sbjct: 176 VEKAESVVQEMKSLGFANTLLVYNVILNFYYQTGNPDKINSLMQEMEQNGIGCDKFAHSI 235

Query: 182 QMAAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIKVGLIEK 328
           Q++AYA+ S+I G+EK L  ME +P + +DW SY  AAKGYIKVGL++K
Sbjct: 236 QLSAYASVSDIVGIEKTLAKMESDPNVFLDWTSYTAAAKGYIKVGLVDK 284


>ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|222867380|gb|EEF04511.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  122 bits (307), Expect = 2e-26
 Identities = 54/109 (49%), Positives = 83/109 (76%)
 Frame = +2

Query: 2   IEKAEALMQQMKQLGFARSPASYNVLLNLYSKVGQYDKLETLLEEMKENGVRANKLTMSI 181
           +EKAEA+MQ+M++LGFAR P  + V+LNLY K G  +KL+ L+ EM+ENG+  +K    I
Sbjct: 163 VEKAEAVMQRMRELGFARKPLVFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCI 222

Query: 182 QMAAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIKVGLIEK 328
           ++++YAA S+ +G+EK L+ +E +P +++DW +YAT A GY KVGL++K
Sbjct: 223 RLSSYAAASDSEGLEKTLKRIESDPNVVLDWATYATVANGYSKVGLLDK 271


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/107 (49%), Positives = 81/107 (75%)
 Frame = +2

Query: 8   KAEALMQQMKQLGFARSPASYNVLLNLYSKVGQYDKLETLLEEMKENGVRANKLTMSIQM 187
           KAEA MQ+MK LGF ++  SYNV+L+LYS +G Y+KL+ L++EM+ENG+  +++T  I++
Sbjct: 158 KAEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRL 217

Query: 188 AAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIKVGLIEK 328
            A   +S+I+GMEK+L  MEV+P I + + +Y  AA GY+K GL++K
Sbjct: 218 NACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDK 264