BLASTX nr result

ID: Coptis24_contig00016488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016488
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274435.2| PREDICTED: G-type lectin S-receptor-like ser...    83   2e-14
ref|XP_002468257.1| hypothetical protein SORBIDRAFT_01g042550 [S...    76   3e-12
emb|CAN68451.1| hypothetical protein VITISV_009436 [Vitis vinifera]    75   4e-12
emb|CBI21864.3| unnamed protein product [Vitis vinifera]               75   5e-12
ref|XP_003539517.1| PREDICTED: G-type lectin S-receptor-like ser...    74   2e-11

>ref|XP_002274435.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At2g19130-like [Vitis vinifera]
          Length = 808

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = +1

Query: 55  QSCLFLLVMFFFS-SIQTHLCFAADTISSGQSLTPNQTLISKGGKFELGFFTPGTSLKYY 231
           ++C FL V+  FS S + HLC  +DTI  GQSL+ NQT+ S GG FELGFFTPG S  YY
Sbjct: 2   KACFFLPVLLLFSLSFKAHLCRGSDTIFPGQSLSGNQTIRSDGGTFELGFFTPGNSRNYY 61

Query: 232 IGIWY 246
           IGIWY
Sbjct: 62  IGIWY 66


>ref|XP_002468257.1| hypothetical protein SORBIDRAFT_01g042550 [Sorghum bicolor]
           gi|241922111|gb|EER95255.1| hypothetical protein
           SORBIDRAFT_01g042550 [Sorghum bicolor]
          Length = 678

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/61 (55%), Positives = 44/61 (72%)
 Frame = +1

Query: 64  LFLLVMFFFSSIQTHLCFAADTISSGQSLTPNQTLISKGGKFELGFFTPGTSLKYYIGIW 243
           + +LV   FSS+   +  A DT++ GQSL  NQTL+SKGG FELG F+PG S K+YIGIW
Sbjct: 1   MLILVFLLFSSVDLQISGATDTLTLGQSLPWNQTLVSKGGNFELGLFSPGNSKKHYIGIW 60

Query: 244 Y 246
           +
Sbjct: 61  F 61


>emb|CAN68451.1| hypothetical protein VITISV_009436 [Vitis vinifera]
          Length = 650

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
 Frame = +1

Query: 70  LLVMFFFSSIQTHLCFA---ADTISSGQSLTPNQTLISKGGKFELGFFTPGTSLKYYIGI 240
           ++++F   S   HL FA    DTIS GQS+T +QT+IS GG+FELGFF+PG S KYY+GI
Sbjct: 13  VILVFLLISSGFHLEFADAFTDTISQGQSITTSQTIISAGGEFELGFFSPGNSTKYYVGI 72

Query: 241 WY 246
           WY
Sbjct: 73  WY 74


>emb|CBI21864.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
 Frame = +1

Query: 55  QSCLFLLVMFFFS-SIQTHLCFAADTISSGQSLTPNQTLISK-GGKFELGFFTPGTSLKY 228
           +SC FL  +  FS S + H C  +DTI  GQSL+ NQT+ S  GG FELGFFTPG S  Y
Sbjct: 2   KSCFFLPFLLLFSLSFKAHPCRGSDTIFPGQSLSGNQTIRSDDGGTFELGFFTPGNSRNY 61

Query: 229 YIGIWY 246
           YIGIWY
Sbjct: 62  YIGIWY 67


>ref|XP_003539517.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At2g19130-like [Glycine max]
          Length = 787

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/63 (60%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
 Frame = +1

Query: 61  CLFLLVMFFFSSIQTHLCFAA-DTISSGQSLTPNQTLISKGGKFELGFFTPGTSLKYYIG 237
           C+ LL +FF  S+ TH   AA  T+SS Q+LT +QTL+SKGG FELGFF PG +  YYIG
Sbjct: 10  CISLLTLFF--SLFTHNSLAALPTVSSNQTLTGDQTLLSKGGIFELGFFKPGNTSNYYIG 67

Query: 238 IWY 246
           IWY
Sbjct: 68  IWY 70


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