BLASTX nr result

ID: Coptis24_contig00016485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016485
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27927.3| unnamed protein product [Vitis vinifera]              164   1e-38
ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262...   164   1e-38
ref|XP_002514143.1| conserved hypothetical protein [Ricinus comm...   159   3e-37
ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35
ref|NP_194685.1| uncharacterized protein [Arabidopsis thaliana] ...   133   3e-29

>emb|CBI27927.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score =  164 bits (415), Expect = 1e-38
 Identities = 92/213 (43%), Positives = 125/213 (58%)
 Frame = -1

Query: 640 MEAWVPLFNIFLNSPTPESEASFWFQHXXXXXXXXXXXXXXXXXXXXSKPIDVAIINXXX 461
           MEAWVPLF+IF+NSP+PE EAS W Q                      KP D  + +   
Sbjct: 1   MEAWVPLFDIFMNSPSPEFEASLWLQQSFNASSATTITTGSFLSLLT-KPCDAVVSDSS- 58

Query: 460 XXXXXSLPAHHSKSVMWIQTLPNAVQMRILSFLRVERRRFCKKELCSLANNILKENQQLD 281
                   +  +K VMW+QTLPN VQ RILSFL +E++RFC ++L  LA N+L  + +++
Sbjct: 59  --------SPSTKRVMWVQTLPNVVQSRILSFLALEKQRFCSRDLSRLARNVLSGDGEVE 110

Query: 280 FWVKKAACNLLDVVSDSSYDWISCMSLEDCDVDQVEEEFESLPSWLKSLNNAPSSVLPWL 101
           FWVK+ A NLLD VS+SSY+WIS + L D   ++V EEFE++P WLK        +LPWL
Sbjct: 111 FWVKRGARNLLDQVSESSYEWISSLGL-DSGGERVNEEFEAMPDWLKDTVGDSDLLLPWL 169

Query: 100 PITCDELRASKLSSSFVDEKVDENSLMEVEGEG 2
           PI+ DEL +    + FV    D + L+   G+G
Sbjct: 170 PISPDELNS---GTHFVCCGDDLDELVVDTGDG 199


>ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262802 [Vitis vinifera]
          Length = 491

 Score =  164 bits (415), Expect = 1e-38
 Identities = 92/213 (43%), Positives = 125/213 (58%)
 Frame = -1

Query: 640 MEAWVPLFNIFLNSPTPESEASFWFQHXXXXXXXXXXXXXXXXXXXXSKPIDVAIINXXX 461
           MEAWVPLF+IF+NSP+PE EAS W Q                      KP D  + +   
Sbjct: 1   MEAWVPLFDIFMNSPSPEFEASLWLQQSFNASSATTITTGSFLSLLT-KPCDAVVSDSS- 58

Query: 460 XXXXXSLPAHHSKSVMWIQTLPNAVQMRILSFLRVERRRFCKKELCSLANNILKENQQLD 281
                   +  +K VMW+QTLPN VQ RILSFL +E++RFC ++L  LA N+L  + +++
Sbjct: 59  --------SPSTKRVMWVQTLPNVVQSRILSFLALEKQRFCSRDLSRLARNVLSGDGEVE 110

Query: 280 FWVKKAACNLLDVVSDSSYDWISCMSLEDCDVDQVEEEFESLPSWLKSLNNAPSSVLPWL 101
           FWVK+ A NLLD VS+SSY+WIS + L D   ++V EEFE++P WLK        +LPWL
Sbjct: 111 FWVKRGARNLLDQVSESSYEWISSLGL-DSGGERVNEEFEAMPDWLKDTVGDSDLLLPWL 169

Query: 100 PITCDELRASKLSSSFVDEKVDENSLMEVEGEG 2
           PI+ DEL +    + FV    D + L+   G+G
Sbjct: 170 PISPDELNS---GTHFVCCGDDLDELVVDTGDG 199


>ref|XP_002514143.1| conserved hypothetical protein [Ricinus communis]
           gi|223546599|gb|EEF48097.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 493

 Score =  159 bits (403), Expect = 3e-37
 Identities = 90/212 (42%), Positives = 123/212 (58%)
 Frame = -1

Query: 640 MEAWVPLFNIFLNSPTPESEASFWFQHXXXXXXXXXXXXXXXXXXXXSKPIDVAIINXXX 461
           ME W+PLF+IFLNS TPE+EAS W                       +KPI+ +I +   
Sbjct: 1   MERWIPLFDIFLNSSTPETEASIWLNQSFSASSPSSPITTASFLSLLTKPINASITSSSP 60

Query: 460 XXXXXSLPAHHSKSVMWIQTLPNAVQMRILSFLRVERRRFCKKELCSLANNILKENQQLD 281
                  PA  +K +M+IQTLP+ VQ RILSFL  E  RFCK++L  LA NIL +N  +D
Sbjct: 61  -------PA--TKRIMFIQTLPDMVQSRILSFLAFEHERFCKRKLSRLATNILTDNLGID 111

Query: 280 FWVKKAACNLLDVVSDSSYDWISCMSLEDCDVDQVEEEFESLPSWLKSLNNAPSSVLPWL 101
           FWVK+AA ++LD +S+S+Y+WIS  SL+  +    + EFESLP WLK   N    VLPWL
Sbjct: 112 FWVKRAAHDVLDQISESNYEWISGFSLDSGEERVDDGEFESLPDWLKDTVNT-DLVLPWL 170

Query: 100 PITCDELRASKLSSSFVDEKVDENSLMEVEGE 5
           P+  D+L + +L  +   E    + + E  G+
Sbjct: 171 PVALDDLNSRELFGTHESEGDPLSQVGECAGD 202


>ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|222854273|gb|EEE91820.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  152 bits (385), Expect = 4e-35
 Identities = 94/214 (43%), Positives = 127/214 (59%), Gaps = 1/214 (0%)
 Frame = -1

Query: 640 MEAWVPLFNIFLNSPTPESEASFWFQHXXXXXXXXXXXXXXXXXXXXSKPIDVAIINXXX 461
           MEAWVPLFNIFLNSPTPE+EAS W +                        +   IIN   
Sbjct: 1   MEAWVPLFNIFLNSPTPETEASLWLEQSSSSSSVPITTTSFLSL------LAEPIINN-- 52

Query: 460 XXXXXSLPAHHSKSVMWIQTLPNAVQMRILSFLRVERRRFCKKELCSLANNILKENQQLD 281
                   +  ++ VM++QTLP  VQ RILSFL  E +RFCK++L  LA  +L + + +D
Sbjct: 53  --------SSTNRRVMFLQTLPFLVQSRILSFLGFEHQRFCKRDLSKLARTLLTDTEGID 104

Query: 280 FWVKKAACNLLDVVSDSSYDWISCMSLEDCDVDQVEEEFESLPSWLK-SLNNAPSSVLPW 104
           FWVK+AA NLLD VSDS+Y WIS +SL D   ++V+EEF S+P +LK + ++A    LPW
Sbjct: 105 FWVKRAARNLLDKVSDSNYQWISGLSL-DSGEERVDEEFGSIPDYLKDAASSANELFLPW 163

Query: 103 LPITCDELRASKLSSSFVDEKVDENSLMEVEGEG 2
           LP++ D L + +L   F   +  E+ L +V GEG
Sbjct: 164 LPLSHDTLNSREL---FAGYESPEDFLSQV-GEG 193


>ref|NP_194685.1| uncharacterized protein [Arabidopsis thaliana]
           gi|5123550|emb|CAB45316.1| hypothetical protein
           [Arabidopsis thaliana] gi|7269855|emb|CAB79714.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|23297599|gb|AAN12988.1| unknown protein [Arabidopsis
           thaliana] gi|332660245|gb|AEE85645.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 493

 Score =  133 bits (334), Expect = 3e-29
 Identities = 70/194 (36%), Positives = 107/194 (55%), Gaps = 2/194 (1%)
 Frame = -1

Query: 640 MEAWVPLFNIFLNSPTPESEASFWFQHXXXXXXXXXXXXXXXXXXXXSKPIDVAIINXXX 461
           ME W+PLF+IFL SP+PE+EAS W                         PI+ +      
Sbjct: 1   MEEWIPLFDIFLKSPSPEAEASLWLDQASNLFSSSSSAAA---------PINRSSFVSLL 51

Query: 460 XXXXXSLPAHHSKSVMWIQTLPNAVQMRILSFLRVERRRFCKKELCSLANNILKE--NQQ 287
                   +  +K V++I+TLPN VQ +ILSFL  E +RFC  +L  LA  +L    N+ 
Sbjct: 52  KKQCDQNSSPVTKKVLFIETLPNMVQSKILSFLLFEYQRFCVSDLVWLAREMLGSGGNKV 111

Query: 286 LDFWVKKAACNLLDVVSDSSYDWISCMSLEDCDVDQVEEEFESLPSWLKSLNNAPSSVLP 107
           +DFWV++ A NLLD +    ++WIS + L+  D D +++ F+S+P WL     +  ++LP
Sbjct: 112 VDFWVQRDAHNLLDRIPKPKFEWISNLDLDSADEDSMKQVFDSVPDWLSEKLGSAGTILP 171

Query: 106 WLPITCDELRASKL 65
           WLP++CD++ +  L
Sbjct: 172 WLPVSCDDVDSEML 185


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