BLASTX nr result
ID: Coptis24_contig00016478
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016478 (385 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002888422.1| calcium-binding EF hand family protein [Arab... 120 1e-25 gb|AAB60908.1| Similar to Saccharomyces hypothetical protein P96... 119 3e-25 ref|NP_176732.2| LETM1-like protein [Arabidopsis thaliana] gi|33... 119 3e-25 ref|XP_002514773.1| leucine zipper-ef-hand containing transmembr... 115 5e-24 emb|CAN67346.1| hypothetical protein VITISV_030338 [Vitis vinifera] 114 6e-24 >ref|XP_002888422.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] gi|297334263|gb|EFH64681.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] Length = 747 Score = 120 bits (301), Expect = 1e-25 Identities = 61/109 (55%), Positives = 71/109 (65%), Gaps = 8/109 (7%) Frame = +3 Query: 81 VQRVRNFILGIGPASKAVALMRREDWMNKSRHWKDEFKSAMQRYWAGTKLIWLAIRISYR 260 +QRVR+F+LGIGPA +A+A M REDW K RHWKDEFKS +Q YW GTKL+W +RIS R Sbjct: 162 MQRVRSFLLGIGPALRAIASMSREDWAKKLRHWKDEFKSTLQHYWLGTKLLWADVRISVR 221 Query: 261 LLLKLAXXXXXXXXXXXXXXXXXADIFR--------VVPFMELLLPVFL 383 LL+KLA ADIFR +VPFME LLPVFL Sbjct: 222 LLVKLANGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVFL 270 >gb|AAB60908.1| Similar to Saccharomyces hypothetical protein P9642.2 (gb|U40828) [Arabidopsis thaliana] Length = 398 Score = 119 bits (297), Expect = 3e-25 Identities = 61/109 (55%), Positives = 70/109 (64%), Gaps = 8/109 (7%) Frame = +3 Query: 81 VQRVRNFILGIGPASKAVALMRREDWMNKSRHWKDEFKSAMQRYWAGTKLIWLAIRISYR 260 +QRVR F+LGIGPA +A+A M REDW K RHWKDEFKS +Q YW GTKL+W +RIS R Sbjct: 98 MQRVRLFLLGIGPALRAIASMSREDWAKKLRHWKDEFKSTLQHYWLGTKLLWADVRISVR 157 Query: 261 LLLKLAXXXXXXXXXXXXXXXXXADIFR--------VVPFMELLLPVFL 383 LL+KLA ADIFR +VPFME LLPVFL Sbjct: 158 LLVKLANGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVFL 206 >ref|NP_176732.2| LETM1-like protein [Arabidopsis thaliana] gi|332196272|gb|AEE34393.1| LETM1-like protein [Arabidopsis thaliana] Length = 736 Score = 119 bits (297), Expect = 3e-25 Identities = 61/109 (55%), Positives = 70/109 (64%), Gaps = 8/109 (7%) Frame = +3 Query: 81 VQRVRNFILGIGPASKAVALMRREDWMNKSRHWKDEFKSAMQRYWAGTKLIWLAIRISYR 260 +QRVR F+LGIGPA +A+A M REDW K RHWKDEFKS +Q YW GTKL+W +RIS R Sbjct: 151 MQRVRLFLLGIGPALRAIASMSREDWAKKLRHWKDEFKSTLQHYWLGTKLLWADVRISVR 210 Query: 261 LLLKLAXXXXXXXXXXXXXXXXXADIFR--------VVPFMELLLPVFL 383 LL+KLA ADIFR +VPFME LLPVFL Sbjct: 211 LLVKLANGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVFL 259 >ref|XP_002514773.1| leucine zipper-ef-hand containing transmembrane protein, putative [Ricinus communis] gi|223545824|gb|EEF47327.1| leucine zipper-ef-hand containing transmembrane protein, putative [Ricinus communis] Length = 758 Score = 115 bits (287), Expect = 5e-24 Identities = 60/113 (53%), Positives = 70/113 (61%), Gaps = 8/113 (7%) Frame = +3 Query: 69 AKIFVQRVRNFILGIGPASKAVALMRREDWMNKSRHWKDEFKSAMQRYWAGTKLIWLAIR 248 +K +QR+ +LGIGPA +A+A M REDW K RHWKDEFKS MQ YW GTKL+W +R Sbjct: 172 SKSVIQRMWAVLLGIGPALRAIASMSREDWAKKLRHWKDEFKSTMQHYWLGTKLLWADVR 231 Query: 249 ISYRLLLKLAXXXXXXXXXXXXXXXXXADIFR--------VVPFMELLLPVFL 383 IS RLL+KLA ADIFR +VPFME LLPVFL Sbjct: 232 ISSRLLVKLASGKGLSRRERQQLMRTTADIFRLVPFAVFIIVPFMEFLLPVFL 284 >emb|CAN67346.1| hypothetical protein VITISV_030338 [Vitis vinifera] Length = 480 Score = 114 bits (286), Expect = 6e-24 Identities = 61/112 (54%), Positives = 68/112 (60%), Gaps = 8/112 (7%) Frame = +3 Query: 72 KIFVQRVRNFILGIGPASKAVALMRREDWMNKSRHWKDEFKSAMQRYWAGTKLIWLAIRI 251 K ++RV +LGIGPA +AVA M REDW K HWKDEFKS MQ YW GTKL+W +RI Sbjct: 175 KYVIKRVWAMLLGIGPALRAVASMSREDWAKKLSHWKDEFKSTMQHYWLGTKLLWADVRI 234 Query: 252 SYRLLLKLAXXXXXXXXXXXXXXXXXADIFR--------VVPFMELLLPVFL 383 S RLLLKLA ADIFR +VPFME LLPVFL Sbjct: 235 SLRLLLKLAGGKSLSRRERQQLTRTTADIFRLVPFAVFIIVPFMEFLLPVFL 286