BLASTX nr result

ID: Coptis24_contig00016478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016478
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888422.1| calcium-binding EF hand family protein [Arab...   120   1e-25
gb|AAB60908.1| Similar to Saccharomyces hypothetical protein P96...   119   3e-25
ref|NP_176732.2| LETM1-like protein [Arabidopsis thaliana] gi|33...   119   3e-25
ref|XP_002514773.1| leucine zipper-ef-hand containing transmembr...   115   5e-24
emb|CAN67346.1| hypothetical protein VITISV_030338 [Vitis vinifera]   114   6e-24

>ref|XP_002888422.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297334263|gb|EFH64681.1| calcium-binding EF
           hand family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/109 (55%), Positives = 71/109 (65%), Gaps = 8/109 (7%)
 Frame = +3

Query: 81  VQRVRNFILGIGPASKAVALMRREDWMNKSRHWKDEFKSAMQRYWAGTKLIWLAIRISYR 260
           +QRVR+F+LGIGPA +A+A M REDW  K RHWKDEFKS +Q YW GTKL+W  +RIS R
Sbjct: 162 MQRVRSFLLGIGPALRAIASMSREDWAKKLRHWKDEFKSTLQHYWLGTKLLWADVRISVR 221

Query: 261 LLLKLAXXXXXXXXXXXXXXXXXADIFR--------VVPFMELLLPVFL 383
           LL+KLA                 ADIFR        +VPFME LLPVFL
Sbjct: 222 LLVKLANGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVFL 270


>gb|AAB60908.1| Similar to Saccharomyces hypothetical protein P9642.2 (gb|U40828)
           [Arabidopsis thaliana]
          Length = 398

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/109 (55%), Positives = 70/109 (64%), Gaps = 8/109 (7%)
 Frame = +3

Query: 81  VQRVRNFILGIGPASKAVALMRREDWMNKSRHWKDEFKSAMQRYWAGTKLIWLAIRISYR 260
           +QRVR F+LGIGPA +A+A M REDW  K RHWKDEFKS +Q YW GTKL+W  +RIS R
Sbjct: 98  MQRVRLFLLGIGPALRAIASMSREDWAKKLRHWKDEFKSTLQHYWLGTKLLWADVRISVR 157

Query: 261 LLLKLAXXXXXXXXXXXXXXXXXADIFR--------VVPFMELLLPVFL 383
           LL+KLA                 ADIFR        +VPFME LLPVFL
Sbjct: 158 LLVKLANGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVFL 206


>ref|NP_176732.2| LETM1-like protein [Arabidopsis thaliana]
           gi|332196272|gb|AEE34393.1| LETM1-like protein
           [Arabidopsis thaliana]
          Length = 736

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/109 (55%), Positives = 70/109 (64%), Gaps = 8/109 (7%)
 Frame = +3

Query: 81  VQRVRNFILGIGPASKAVALMRREDWMNKSRHWKDEFKSAMQRYWAGTKLIWLAIRISYR 260
           +QRVR F+LGIGPA +A+A M REDW  K RHWKDEFKS +Q YW GTKL+W  +RIS R
Sbjct: 151 MQRVRLFLLGIGPALRAIASMSREDWAKKLRHWKDEFKSTLQHYWLGTKLLWADVRISVR 210

Query: 261 LLLKLAXXXXXXXXXXXXXXXXXADIFR--------VVPFMELLLPVFL 383
           LL+KLA                 ADIFR        +VPFME LLPVFL
Sbjct: 211 LLVKLANGKGLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVFL 259


>ref|XP_002514773.1| leucine zipper-ef-hand containing transmembrane protein, putative
           [Ricinus communis] gi|223545824|gb|EEF47327.1| leucine
           zipper-ef-hand containing transmembrane protein,
           putative [Ricinus communis]
          Length = 758

 Score =  115 bits (287), Expect = 5e-24
 Identities = 60/113 (53%), Positives = 70/113 (61%), Gaps = 8/113 (7%)
 Frame = +3

Query: 69  AKIFVQRVRNFILGIGPASKAVALMRREDWMNKSRHWKDEFKSAMQRYWAGTKLIWLAIR 248
           +K  +QR+   +LGIGPA +A+A M REDW  K RHWKDEFKS MQ YW GTKL+W  +R
Sbjct: 172 SKSVIQRMWAVLLGIGPALRAIASMSREDWAKKLRHWKDEFKSTMQHYWLGTKLLWADVR 231

Query: 249 ISYRLLLKLAXXXXXXXXXXXXXXXXXADIFR--------VVPFMELLLPVFL 383
           IS RLL+KLA                 ADIFR        +VPFME LLPVFL
Sbjct: 232 ISSRLLVKLASGKGLSRRERQQLMRTTADIFRLVPFAVFIIVPFMEFLLPVFL 284


>emb|CAN67346.1| hypothetical protein VITISV_030338 [Vitis vinifera]
          Length = 480

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/112 (54%), Positives = 68/112 (60%), Gaps = 8/112 (7%)
 Frame = +3

Query: 72  KIFVQRVRNFILGIGPASKAVALMRREDWMNKSRHWKDEFKSAMQRYWAGTKLIWLAIRI 251
           K  ++RV   +LGIGPA +AVA M REDW  K  HWKDEFKS MQ YW GTKL+W  +RI
Sbjct: 175 KYVIKRVWAMLLGIGPALRAVASMSREDWAKKLSHWKDEFKSTMQHYWLGTKLLWADVRI 234

Query: 252 SYRLLLKLAXXXXXXXXXXXXXXXXXADIFR--------VVPFMELLLPVFL 383
           S RLLLKLA                 ADIFR        +VPFME LLPVFL
Sbjct: 235 SLRLLLKLAGGKSLSRRERQQLTRTTADIFRLVPFAVFIIVPFMEFLLPVFL 286


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