BLASTX nr result

ID: Coptis24_contig00016477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016477
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150082.1| PREDICTED: importin subunit alpha-1-like [Cu...   121   5e-26
ref|XP_003536050.1| PREDICTED: importin subunit alpha-1-like [Gl...   119   3e-25
ref|XP_002275593.1| PREDICTED: importin subunit alpha-1 [Vitis v...   119   3e-25
ref|XP_003556535.1| PREDICTED: importin subunit alpha-1-like [Gl...   118   6e-25
gb|ABM05488.1| Impa2 [Nicotiana benthamiana]                          118   6e-25

>ref|XP_004150082.1| PREDICTED: importin subunit alpha-1-like [Cucumis sativus]
           gi|449501502|ref|XP_004161385.1| PREDICTED: importin
           subunit alpha-1-like [Cucumis sativus]
          Length = 530

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/78 (78%), Positives = 71/78 (91%)
 Frame = -1

Query: 236 RKNKREESLQKKRREGMTSANQQQFPSSIHQSQIEKKLESLPSMVAGVWMDDNALQLEST 57
           RK+KREESLQKKRREG+ +   QQFPS++H S +EKKLESLPSMVAGVW D+++LQLE+T
Sbjct: 37  RKSKREESLQKKRREGLQA---QQFPSAVHTSTVEKKLESLPSMVAGVWSDNSSLQLEAT 93

Query: 56  TQFRKLLSIERSPPIEEV 3
           TQFRKLLSIERSPPIEEV
Sbjct: 94  TQFRKLLSIERSPPIEEV 111


>ref|XP_003536050.1| PREDICTED: importin subunit alpha-1-like [Glycine max]
          Length = 532

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/78 (76%), Positives = 66/78 (84%)
 Frame = -1

Query: 236 RKNKREESLQKKRREGMTSANQQQFPSSIHQSQIEKKLESLPSMVAGVWMDDNALQLEST 57
           RKN+REESLQKKRREG+     QQ P+S+H S +EKKLE LPSMV GVW DDN LQLE+T
Sbjct: 39  RKNRREESLQKKRREGL---QPQQMPASVHSSLVEKKLEHLPSMVTGVWTDDNNLQLEAT 95

Query: 56  TQFRKLLSIERSPPIEEV 3
           TQFRKLLSIERSPPIEEV
Sbjct: 96  TQFRKLLSIERSPPIEEV 113


>ref|XP_002275593.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera]
           gi|296083287|emb|CBI22923.3| unnamed protein product
           [Vitis vinifera]
          Length = 529

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/78 (76%), Positives = 70/78 (89%)
 Frame = -1

Query: 236 RKNKREESLQKKRREGMTSANQQQFPSSIHQSQIEKKLESLPSMVAGVWMDDNALQLEST 57
           RK+KREESLQKKRREG+ +   QQFP++ H S +EKKLESLPSMVAGVW D+++LQLE+T
Sbjct: 37  RKSKREESLQKKRREGLQA---QQFPAAAHASTVEKKLESLPSMVAGVWSDNSSLQLEAT 93

Query: 56  TQFRKLLSIERSPPIEEV 3
           TQFRKLLSIERSPPIEEV
Sbjct: 94  TQFRKLLSIERSPPIEEV 111


>ref|XP_003556535.1| PREDICTED: importin subunit alpha-1-like [Glycine max]
          Length = 532

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/78 (76%), Positives = 65/78 (83%)
 Frame = -1

Query: 236 RKNKREESLQKKRREGMTSANQQQFPSSIHQSQIEKKLESLPSMVAGVWMDDNALQLEST 57
           RKN+REESLQKKRREG      QQ P+S+H S +EKKLE LPSMV GVW DDN LQLE+T
Sbjct: 39  RKNRREESLQKKRREGF---QPQQIPASVHSSLVEKKLEHLPSMVTGVWTDDNNLQLEAT 95

Query: 56  TQFRKLLSIERSPPIEEV 3
           TQFRKLLSIERSPPIEEV
Sbjct: 96  TQFRKLLSIERSPPIEEV 113


>gb|ABM05488.1| Impa2 [Nicotiana benthamiana]
          Length = 529

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/78 (76%), Positives = 68/78 (87%)
 Frame = -1

Query: 236 RKNKREESLQKKRREGMTSANQQQFPSSIHQSQIEKKLESLPSMVAGVWMDDNALQLEST 57
           RK+KREESL KKRREG+    QQ FP+++H S +EKKLESLPSMVAGVW +DN LQLE+T
Sbjct: 37  RKSKREESLLKKRREGL-QPQQQPFPANLHTSTVEKKLESLPSMVAGVWSNDNNLQLEAT 95

Query: 56  TQFRKLLSIERSPPIEEV 3
           TQFRKLLSIERSPPIEEV
Sbjct: 96  TQFRKLLSIERSPPIEEV 113