BLASTX nr result

ID: Coptis24_contig00016473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016473
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   384   e-104
ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   376   e-102
ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   375   e-102
emb|CBI23596.3| unnamed protein product [Vitis vinifera]              375   e-101
ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   374   e-101

>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera] gi|147807864|emb|CAN66433.1|
           hypothetical protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  384 bits (986), Expect = e-104
 Identities = 187/314 (59%), Positives = 240/314 (76%), Gaps = 9/314 (2%)
 Frame = -2

Query: 917 VPSSISSE--SDYNRVEELKAFDETKAGVKGLVDSGLANIPKMFMIPANELKQNSDSNPT 744
           V +SIS E   DY+R  ELKAFDE+K GVKGLVD+G++ +P+MF+ P + L+  +    T
Sbjct: 2   VITSISHEFPEDYDRASELKAFDESKTGVKGLVDAGVSKVPRMFIQPPDNLRTYT----T 57

Query: 743 RFHIPMIDLQG------DRKKVVDEIKVASEKWGFFQVVNHGVPLSVLDEMIKGVIRFNE 582
           +F+ P++DLQG       R K+VD +K ASE WGFF VVNHG+P+SVL+EM++GV+RF E
Sbjct: 58  QFNFPVVDLQGMDNDPIRRNKIVDMVKDASETWGFFNVVNHGIPVSVLEEMMEGVLRFYE 117

Query: 581 HDDEVRKQFYSRDR-KKRVRFNSNFDLYTSKAANWRDTLTVEIFTPAPLDPNELPAACRD 405
            D EV+KQFY+RD  +K++ +NSNFDLYT+ AANWRDT    +  P P +P ELPAACRD
Sbjct: 118 QDTEVKKQFYTRDASRKKMVYNSNFDLYTAPAANWRDTFYC-LMAPHPPNPEELPAACRD 176

Query: 404 ITIEYAKHVTTLGDAMFELLSEAIGLKADHLKQMNCNEACFLVSHYYPACPEPELTLGTT 225
           I +EY   +  LG  +FEL+SEA+GL  +HLK M+C E   ++ HYYP+CP+PELT+GTT
Sbjct: 177 ILMEYKDQIMRLGFKLFELISEALGLNPNHLKDMDCTEGLSILCHYYPSCPQPELTMGTT 236

Query: 224 KHTDPSFLTILLQDHIGGLQVLHQDHWVDVNPIPGALVINIGDFLQITSNDKLKSIEHRV 45
           KH D  FLT+LLQD IGGLQVLHQ  W+DV P+PGALVIN+GD LQ+ +ND+ KS+EHRV
Sbjct: 237 KHADNDFLTVLLQDQIGGLQVLHQGQWIDVPPMPGALVINVGDLLQLITNDRFKSVEHRV 296

Query: 44  RANHIGPRVSVACF 3
            ANHIGPRVSVACF
Sbjct: 297 LANHIGPRVSVACF 310


>ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 364

 Score =  376 bits (966), Expect = e-102
 Identities = 181/319 (56%), Positives = 240/319 (75%), Gaps = 6/319 (1%)
 Frame = -2

Query: 941 MVITKEAAVPSSISSESDYNRVEELKAFDETKAGVKGLVDSGLANIPKMFMIPANELKQN 762
           MV+T  + +P       DY+R  ELKAFDE+KAGVKGLVD+G++ +P++F+ P  + + N
Sbjct: 1   MVVTSTSELPG------DYDRASELKAFDESKAGVKGLVDAGVSQVPRIFIQPLEKSRAN 54

Query: 761 SDSNPTRFHIPMIDLQG------DRKKVVDEIKVASEKWGFFQVVNHGVPLSVLDEMIKG 600
            +   T+F  P+IDLQG       RK++VD+++ ASE WGFF V+NHG+P++VL+EM+ G
Sbjct: 55  VN---TQFKFPVIDLQGMDTDRVQRKQIVDKVREASETWGFFNVLNHGIPVTVLEEMMNG 111

Query: 599 VIRFNEHDDEVRKQFYSRDRKKRVRFNSNFDLYTSKAANWRDTLTVEIFTPAPLDPNELP 420
           V RF E D E++++FY+RD  +++ +NSNFDLYT+KAA+WRDT    +  P P +P +LP
Sbjct: 112 VRRFYEQDTELKQEFYTRDVSRKLVYNSNFDLYTAKAASWRDTFYC-LMAPHPPNPQDLP 170

Query: 419 AACRDITIEYAKHVTTLGDAMFELLSEAIGLKADHLKQMNCNEACFLVSHYYPACPEPEL 240
           AACRDI +EY + V  LG  + EL+SEA+GL  +HLK M+C E   +V HYYPACP+PEL
Sbjct: 171 AACRDILMEYKEQVMKLGFKLLELMSEALGLNPNHLKGMDCAEGLAMVCHYYPACPQPEL 230

Query: 239 TLGTTKHTDPSFLTILLQDHIGGLQVLHQDHWVDVNPIPGALVINIGDFLQITSNDKLKS 60
           TLGT  HTD  FLT+LLQD IGGLQVLHQD WVDV P+PGALVIN+GD LQ+ +ND+ KS
Sbjct: 231 TLGTGFHTDNDFLTVLLQDQIGGLQVLHQDQWVDVPPMPGALVINVGDLLQLITNDRFKS 290

Query: 59  IEHRVRANHIGPRVSVACF 3
           +EHRV ANH GPRVS+ACF
Sbjct: 291 VEHRVLANHTGPRVSIACF 309


>ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 363

 Score =  375 bits (964), Expect = e-102
 Identities = 185/309 (59%), Positives = 230/309 (74%), Gaps = 6/309 (1%)
 Frame = -2

Query: 911 SSISSESDYNRVEELKAFDETKAGVKGLVDSGLANIPKMFMIPANELKQNSDSNPTRFHI 732
           S+     DY+R  ELKAFDE+K GVKGLVD+G++ +P+MF+ P +    NS    T+F  
Sbjct: 5   STTKFSEDYDRASELKAFDESKEGVKGLVDAGVSKVPRMFIRPPD----NSRDCNTQFKF 60

Query: 731 PMIDLQG------DRKKVVDEIKVASEKWGFFQVVNHGVPLSVLDEMIKGVIRFNEHDDE 570
           P+IDL G       RKK+V+ ++ ASE WG F VVNHG+P+SVL+EM+ GV RF E D+E
Sbjct: 61  PVIDLHGMDSDPIRRKKIVEMVREASETWGLFTVVNHGIPVSVLEEMMDGVHRFYEQDNE 120

Query: 569 VRKQFYSRDRKKRVRFNSNFDLYTSKAANWRDTLTVEIFTPAPLDPNELPAACRDITIEY 390
           V+K+FY+RD  ++V +NSNFDLY SKAANWRDT    +  P PL+P ELPA CRDI +EY
Sbjct: 121 VKKEFYTRDLTRKVIYNSNFDLYVSKAANWRDTFYC-LMAPHPLNPQELPATCRDILMEY 179

Query: 389 AKHVTTLGDAMFELLSEAIGLKADHLKQMNCNEACFLVSHYYPACPEPELTLGTTKHTDP 210
            + V  LG  + EL+SEAIGL  +HLK M+C E   ++ HYYPACP+PELT+GTTKH+D 
Sbjct: 180 KEQVMRLGLKLLELMSEAIGLNPNHLKDMDCAEGLAILCHYYPACPQPELTMGTTKHSDN 239

Query: 209 SFLTILLQDHIGGLQVLHQDHWVDVNPIPGALVINIGDFLQITSNDKLKSIEHRVRANHI 30
            FLTILLQD IGGLQVLHQD WVDV P PGALVIN+GD LQ+ +ND+ KS+EHRV AN  
Sbjct: 240 DFLTILLQDQIGGLQVLHQDQWVDVPPEPGALVINVGDLLQLITNDRFKSVEHRVLANRR 299

Query: 29  GPRVSVACF 3
           GPRVSVACF
Sbjct: 300 GPRVSVACF 308


>emb|CBI23596.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score =  375 bits (962), Expect = e-101
 Identities = 177/304 (58%), Positives = 232/304 (76%), Gaps = 6/304 (1%)
 Frame = -2

Query: 896 ESDYNRVEELKAFDETKAGVKGLVDSGLANIPKMFMIPANELKQNSDSNPTRFHIPMIDL 717
           +S+Y+R  EL AFD++KAGVKGLVD+G+A IP+MF+ P + L++ S S   +  IP+IDL
Sbjct: 2   DSEYDRKSELIAFDDSKAGVKGLVDAGVAKIPRMFIHPQHNLREKSVSTNAQLRIPIIDL 61

Query: 716 QGD------RKKVVDEIKVASEKWGFFQVVNHGVPLSVLDEMIKGVIRFNEHDDEVRKQF 555
           +G       R K++D+++ A E WG FQ+VNHG+  SVL+EMIKG+ RFNE D EV+K+F
Sbjct: 62  EGVNSDAILRAKIIDKVRNACEIWGIFQIVNHGILKSVLEEMIKGIRRFNEQDTEVKKEF 121

Query: 554 YSRDRKKRVRFNSNFDLYTSKAANWRDTLTVEIFTPAPLDPNELPAACRDITIEYAKHVT 375
           Y+RD  K+V+F SNFDL+ + AA W+D+ +  I  P P DP ++PA CRDI +EY+K V 
Sbjct: 122 YTRDSSKKVKFVSNFDLFQAPAATWKDSFSC-IINPNPPDPTDMPAVCRDIIMEYSKQVK 180

Query: 374 TLGDAMFELLSEAIGLKADHLKQMNCNEACFLVSHYYPACPEPELTLGTTKHTDPSFLTI 195
            L + +FEL++EA+GL ++HLK M C E  FLVSHYYPACPEPELT+GT  HTDP+FLT+
Sbjct: 181 MLANTLFELVAEALGLNSNHLKDMECAEGLFLVSHYYPACPEPELTMGTKTHTDPTFLTV 240

Query: 194 LLQDHIGGLQVLHQDHWVDVNPIPGALVINIGDFLQITSNDKLKSIEHRVRANHIGPRVS 15
           LLQD +GGLQVLH+  WV+VNP+PGALVIN GD LQ+ SND  +S +HRV ANH GPRVS
Sbjct: 241 LLQDQVGGLQVLHEKQWVNVNPVPGALVINTGDLLQLVSNDMFRSAKHRVLANHKGPRVS 300

Query: 14  VACF 3
           VA F
Sbjct: 301 VASF 304


>ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3
           [Vitis vinifera]
          Length = 673

 Score =  374 bits (960), Expect = e-101
 Identities = 184/314 (58%), Positives = 237/314 (75%), Gaps = 9/314 (2%)
 Frame = -2

Query: 917 VPSSISSE--SDYNRVEELKAFDETKAGVKGLVDSGLANIPKMFMIPANELKQNSDSNPT 744
           V +SIS E   DY+R  ELKAFDE+K GVKGL D+G++ +P+MF+ P + L+  +    T
Sbjct: 2   VITSISHEFPEDYDRASELKAFDESKTGVKGLADAGVSKVPRMFIQPPDNLRTYT----T 57

Query: 743 RFHIPMIDLQG------DRKKVVDEIKVASEKWGFFQVVNHGVPLSVLDEMIKGVIRFNE 582
           +F+ P++DLQG       R K+VD ++ ASE WGFF VVNHG+P+SVL+EM++GV RF+E
Sbjct: 58  QFNFPVVDLQGMDNDPIRRNKIVDMVRDASETWGFFNVVNHGIPVSVLEEMMEGVRRFHE 117

Query: 581 HDDEVRKQFYSRDR-KKRVRFNSNFDLYTSKAANWRDTLTVEIFTPAPLDPNELPAACRD 405
            D EV+KQFY+RD  +K+V +NSNFDLYT+ AANWRDT    +  P P +P ELPA+CRD
Sbjct: 118 QDTEVKKQFYTRDASRKKVMYNSNFDLYTAPAANWRDTFYC-LMAPHPPNPEELPASCRD 176

Query: 404 ITIEYAKHVTTLGDAMFELLSEAIGLKADHLKQMNCNEACFLVSHYYPACPEPELTLGTT 225
           I +EY   V  LG  +FEL+SEA+GL  +HLK M+C E   ++ HYYP+CP+PELT+GTT
Sbjct: 177 ILMEYKDQVMRLGFKLFELISEALGLNPNHLKDMDCAEGLSILCHYYPSCPQPELTMGTT 236

Query: 224 KHTDPSFLTILLQDHIGGLQVLHQDHWVDVNPIPGALVINIGDFLQITSNDKLKSIEHRV 45
           KH D  FLT+LLQD IGGLQVLHQ  W+DV P  GALVIN+GD LQ+ +ND+ KS++HRV
Sbjct: 237 KHADNDFLTVLLQDQIGGLQVLHQGQWIDVPPRLGALVINVGDLLQLITNDRFKSVKHRV 296

Query: 44  RANHIGPRVSVACF 3
            ANHIGPRVSVACF
Sbjct: 297 PANHIGPRVSVACF 310



 Score =  324 bits (830), Expect = 3e-86
 Identities = 158/254 (62%), Positives = 192/254 (75%), Gaps = 6/254 (2%)
 Frame = -2

Query: 746  TRFHIPMIDLQ------GDRKKVVDEIKVASEKWGFFQVVNHGVPLSVLDEMIKGVIRFN 585
            T+F  P+IDLQ        RK++VD ++ ASE WGFF VVNHG+ ++VL+EM  GV RF 
Sbjct: 366  TKFSFPVIDLQDMNTDPARRKEIVDMVRDASETWGFFNVVNHGISVTVLEEMKDGVRRFY 425

Query: 584  EHDDEVRKQFYSRDRKKRVRFNSNFDLYTSKAANWRDTLTVEIFTPAPLDPNELPAACRD 405
            E D EV+KQ+YSRD +++V +NSNFDLY + AANWRDT    +  P P DP ELP A RD
Sbjct: 426  EQDTEVKKQYYSRDLERKVVYNSNFDLYKAPAANWRDTFYF-LMAPQPPDPQELPPAFRD 484

Query: 404  ITIEYAKHVTTLGDAMFELLSEAIGLKADHLKQMNCNEACFLVSHYYPACPEPELTLGTT 225
            I IEY   V  LG  + EL+SEA+GLKA+HLK M+C E   ++ HYYPACP+PELT+GTT
Sbjct: 485  ILIEYKDEVMKLGFKLLELISEALGLKANHLKDMDCAEGLAMLCHYYPACPQPELTMGTT 544

Query: 224  KHTDPSFLTILLQDHIGGLQVLHQDHWVDVNPIPGALVINIGDFLQITSNDKLKSIEHRV 45
            KH D  FLT+LLQD IGGLQVLHQD WVDV P+PGALVINIGD LQ+ +ND+ KS+EHRV
Sbjct: 545  KHADNDFLTVLLQDEIGGLQVLHQDQWVDVPPMPGALVINIGDLLQLITNDRFKSVEHRV 604

Query: 44   RANHIGPRVSVACF 3
             A+H GPRVSVACF
Sbjct: 605  LASHKGPRVSVACF 618


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