BLASTX nr result

ID: Coptis24_contig00016472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016472
         (1011 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518872.1| ATP-dependent transporter, putative [Ricinus...    49   6e-06

>ref|XP_002518872.1| ATP-dependent transporter, putative [Ricinus communis]
           gi|223541859|gb|EEF43405.1| ATP-dependent transporter,
           putative [Ricinus communis]
          Length = 383

 Score = 48.5 bits (114), Expect(2) = 6e-06
 Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
 Frame = +1

Query: 676 LLDEPMDFLDLHAGKWCPA---K*AMTFLVASHARAILNTTYT----LHGQLMNPFE 825
           LLDEP + LDLHA  W  +   K   TF+V SHAR  LNT  T    LHGQ +N ++
Sbjct: 31  LLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDILHLHGQKLNAYK 87



 Score = 28.5 bits (62), Expect(2) = 6e-06
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 810 YESF*DDIRKQLKNLQKVAESNERAKEQVVVFI 908
           Y++F     +Q+KN QK  E+NE+A+  +  FI
Sbjct: 90  YDTFERTREEQVKNQQKALEANEKARAHMQSFI 122


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