BLASTX nr result

ID: Coptis24_contig00016471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016471
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39127.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_002270030.1| PREDICTED: uncharacterized protein At5g39865...    60   1e-07
ref|XP_003518166.1| PREDICTED: uncharacterized protein At5g39865...    57   2e-06
ref|XP_002308331.1| hypothetical protein POPTRDRAFT_417738 [Popu...    56   3e-06
emb|CBI24996.3| unnamed protein product [Vitis vinifera]               55   4e-06

>emb|CBI39127.3| unnamed protein product [Vitis vinifera]
          Length = 183

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
 Frame = +1

Query: 1   CYNCNGSCKISPDRS---DDDLSVQCPNCNENGFLVCPMCC 114
           C+NCNGSCK+  D     DD L ++CP CNENG + CP+CC
Sbjct: 143 CFNCNGSCKVIADGDGDGDDLLHIRCPECNENGLIKCPICC 183


>ref|XP_002270030.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
          Length = 290

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
 Frame = +1

Query: 1   CYNCNGSCKISPDRS---DDDLSVQCPNCNENGFLVCPMCC 114
           C+NCNGSCK+  D     DD L ++CP CNENG + CP+CC
Sbjct: 250 CFNCNGSCKVIADGDGDGDDLLHIRCPECNENGLIKCPICC 290


>ref|XP_003518166.1| PREDICTED: uncharacterized protein At5g39865-like [Glycine max]
          Length = 264

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
 Frame = +1

Query: 1   CYNCNGSCKISPDRSDD--DLSVQCPNCNENGFLVCPMCC 114
           C+NCNGSCK+     D+  +  ++CP CNENG + CP+CC
Sbjct: 225 CFNCNGSCKVFTTNGDNKNECFIRCPECNENGLVKCPICC 264


>ref|XP_002308331.1| hypothetical protein POPTRDRAFT_417738 [Populus trichocarpa]
           gi|222854307|gb|EEE91854.1| hypothetical protein
           POPTRDRAFT_417738 [Populus trichocarpa]
          Length = 165

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = +1

Query: 1   CYNCNGSCKISPDRSDDDLSVQCPNCNENGFLVCPMC 111
           C NCNGSCK+  D  +++  ++CP CNENG   CP+C
Sbjct: 129 CSNCNGSCKVFEDDQNEEKCIRCPECNENGLAKCPIC 165


>emb|CBI24996.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = +1

Query: 1   CYNCNGSCKISPDRSDDDLSVQCPNCNENGFLVCPMCC 114
           CY C GS KI  D  +  LS  CP+CNENG ++CP+CC
Sbjct: 362 CYKCCGSRKIVSDDGNHGLSNNCPHCNENGLIICPICC 399


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