BLASTX nr result
ID: Coptis24_contig00016468
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016468 (309 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004139535.1| PREDICTED: vesicle-fusing ATPase-like [Cucum... 78 6e-13 ref|XP_002519069.1| vesicular-fusion protein nsf, putative [Rici... 77 1e-12 ref|XP_002305796.1| predicted protein [Populus trichocarpa] gi|2... 73 3e-11 ref|XP_002329781.1| predicted protein [Populus trichocarpa] gi|2... 71 1e-10 ref|XP_002284987.1| PREDICTED: vesicle-fusing ATPase-like [Vitis... 70 1e-10 >ref|XP_004139535.1| PREDICTED: vesicle-fusing ATPase-like [Cucumis sativus] gi|449513613|ref|XP_004164372.1| PREDICTED: vesicle-fusing ATPase-like [Cucumis sativus] Length = 743 Score = 78.2 bits (191), Expect = 6e-13 Identities = 44/73 (60%), Positives = 52/73 (71%) Frame = -1 Query: 219 MAGGSWYGSPTPSHTMIVTNTPSPDLALTNIAYCSYSDLNKFNVPKTKLYLASVADNSSV 40 MAG S P+ TMIVTNTP+ DLA+TN+AYCS SDL + VP TKL+LA V D S V Sbjct: 1 MAGRFGLSSTAPA-TMIVTNTPAQDLAVTNLAYCSASDLQNYAVPGTKLFLALVGD-SFV 58 Query: 39 LSISAHERITEGH 1 LS+SAH I+ GH Sbjct: 59 LSLSAHGSISSGH 71 >ref|XP_002519069.1| vesicular-fusion protein nsf, putative [Ricinus communis] gi|223541732|gb|EEF43280.1| vesicular-fusion protein nsf, putative [Ricinus communis] Length = 701 Score = 77.4 bits (189), Expect = 1e-12 Identities = 40/61 (65%), Positives = 48/61 (78%) Frame = -1 Query: 183 SHTMIVTNTPSPDLALTNIAYCSYSDLNKFNVPKTKLYLASVADNSSVLSISAHERITEG 4 S TMIVT+TP+ DLALTN+AYCS SDL+ F VP TKL++A +AD S VLS+S HE I G Sbjct: 9 SATMIVTSTPAADLALTNLAYCSASDLHNFAVPGTKLFMALIAD-SFVLSLSPHENIRAG 67 Query: 3 H 1 H Sbjct: 68 H 68 >ref|XP_002305796.1| predicted protein [Populus trichocarpa] gi|222848760|gb|EEE86307.1| predicted protein [Populus trichocarpa] Length = 738 Score = 72.8 bits (177), Expect = 3e-11 Identities = 39/60 (65%), Positives = 46/60 (76%) Frame = -1 Query: 183 SHTMIVTNTPSPDLALTNIAYCSYSDLNKFNVPKTKLYLASVADNSSVLSISAHERITEG 4 S TMIVTNTP+ DLALTN+AYCS SDL+ F VP TKL+LA VAD+S +I+ HE I G Sbjct: 9 STTMIVTNTPAADLALTNLAYCSPSDLHNFAVPGTKLFLALVADSS---AITPHENIRTG 65 >ref|XP_002329781.1| predicted protein [Populus trichocarpa] gi|222870843|gb|EEF07974.1| predicted protein [Populus trichocarpa] Length = 750 Score = 70.9 bits (172), Expect = 1e-10 Identities = 42/65 (64%), Positives = 46/65 (70%), Gaps = 5/65 (7%) Frame = -1 Query: 183 SHTMIVTNTPSPDLALTNIAYCSYSDLNKFNVPKTKLYLASVADNSSVLSIS-----AHE 19 S TMIVTNTP DLALTN+AYCS SDL+ F VP TKL+LA VAD S VLS+S HE Sbjct: 9 SSTMIVTNTPGADLALTNLAYCSPSDLHNFAVPGTKLFLALVAD-SFVLSLSYPLLTPHE 67 Query: 18 RITEG 4 I G Sbjct: 68 NIRTG 72 >ref|XP_002284987.1| PREDICTED: vesicle-fusing ATPase-like [Vitis vinifera] Length = 739 Score = 70.5 bits (171), Expect = 1e-10 Identities = 44/73 (60%), Positives = 48/73 (65%) Frame = -1 Query: 219 MAGGSWYGSPTPSHTMIVTNTPSPDLALTNIAYCSYSDLNKFNVPKTKLYLASVADNSSV 40 MAG S + S +MIVTNTP+ DL TN AYCS SDL KF V + L LASV D S V Sbjct: 1 MAGRSGHDS-----SMIVTNTPARDLVHTNFAYCSPSDLRKFAVHGSNLALASVGD-SCV 54 Query: 39 LSISAHERITEGH 1 LSISAHE I GH Sbjct: 55 LSISAHESIPNGH 67