BLASTX nr result

ID: Coptis24_contig00016468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016468
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139535.1| PREDICTED: vesicle-fusing ATPase-like [Cucum...    78   6e-13
ref|XP_002519069.1| vesicular-fusion protein nsf, putative [Rici...    77   1e-12
ref|XP_002305796.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002329781.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002284987.1| PREDICTED: vesicle-fusing ATPase-like [Vitis...    70   1e-10

>ref|XP_004139535.1| PREDICTED: vesicle-fusing ATPase-like [Cucumis sativus]
           gi|449513613|ref|XP_004164372.1| PREDICTED:
           vesicle-fusing ATPase-like [Cucumis sativus]
          Length = 743

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 44/73 (60%), Positives = 52/73 (71%)
 Frame = -1

Query: 219 MAGGSWYGSPTPSHTMIVTNTPSPDLALTNIAYCSYSDLNKFNVPKTKLYLASVADNSSV 40
           MAG     S  P+ TMIVTNTP+ DLA+TN+AYCS SDL  + VP TKL+LA V D S V
Sbjct: 1   MAGRFGLSSTAPA-TMIVTNTPAQDLAVTNLAYCSASDLQNYAVPGTKLFLALVGD-SFV 58

Query: 39  LSISAHERITEGH 1
           LS+SAH  I+ GH
Sbjct: 59  LSLSAHGSISSGH 71


>ref|XP_002519069.1| vesicular-fusion protein nsf, putative [Ricinus communis]
           gi|223541732|gb|EEF43280.1| vesicular-fusion protein
           nsf, putative [Ricinus communis]
          Length = 701

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/61 (65%), Positives = 48/61 (78%)
 Frame = -1

Query: 183 SHTMIVTNTPSPDLALTNIAYCSYSDLNKFNVPKTKLYLASVADNSSVLSISAHERITEG 4
           S TMIVT+TP+ DLALTN+AYCS SDL+ F VP TKL++A +AD S VLS+S HE I  G
Sbjct: 9   SATMIVTSTPAADLALTNLAYCSASDLHNFAVPGTKLFMALIAD-SFVLSLSPHENIRAG 67

Query: 3   H 1
           H
Sbjct: 68  H 68


>ref|XP_002305796.1| predicted protein [Populus trichocarpa] gi|222848760|gb|EEE86307.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/60 (65%), Positives = 46/60 (76%)
 Frame = -1

Query: 183 SHTMIVTNTPSPDLALTNIAYCSYSDLNKFNVPKTKLYLASVADNSSVLSISAHERITEG 4
           S TMIVTNTP+ DLALTN+AYCS SDL+ F VP TKL+LA VAD+S   +I+ HE I  G
Sbjct: 9   STTMIVTNTPAADLALTNLAYCSPSDLHNFAVPGTKLFLALVADSS---AITPHENIRTG 65


>ref|XP_002329781.1| predicted protein [Populus trichocarpa] gi|222870843|gb|EEF07974.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/65 (64%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
 Frame = -1

Query: 183 SHTMIVTNTPSPDLALTNIAYCSYSDLNKFNVPKTKLYLASVADNSSVLSIS-----AHE 19
           S TMIVTNTP  DLALTN+AYCS SDL+ F VP TKL+LA VAD S VLS+S      HE
Sbjct: 9   SSTMIVTNTPGADLALTNLAYCSPSDLHNFAVPGTKLFLALVAD-SFVLSLSYPLLTPHE 67

Query: 18  RITEG 4
            I  G
Sbjct: 68  NIRTG 72


>ref|XP_002284987.1| PREDICTED: vesicle-fusing ATPase-like [Vitis vinifera]
          Length = 739

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/73 (60%), Positives = 48/73 (65%)
 Frame = -1

Query: 219 MAGGSWYGSPTPSHTMIVTNTPSPDLALTNIAYCSYSDLNKFNVPKTKLYLASVADNSSV 40
           MAG S + S     +MIVTNTP+ DL  TN AYCS SDL KF V  + L LASV D S V
Sbjct: 1   MAGRSGHDS-----SMIVTNTPARDLVHTNFAYCSPSDLRKFAVHGSNLALASVGD-SCV 54

Query: 39  LSISAHERITEGH 1
           LSISAHE I  GH
Sbjct: 55  LSISAHESIPNGH 67


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