BLASTX nr result

ID: Coptis24_contig00016466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016466
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136911.1| PREDICTED: uncharacterized protein LOC101208...   121   5e-26
ref|XP_002264519.2| PREDICTED: uncharacterized protein LOC100254...   116   2e-24
emb|CBI38035.3| unnamed protein product [Vitis vinifera]              116   2e-24
emb|CAN59848.1| hypothetical protein VITISV_026675 [Vitis vinifera]   116   2e-24
ref|XP_002300308.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24

>ref|XP_004136911.1| PREDICTED: uncharacterized protein LOC101208378 [Cucumis sativus]
           gi|449478812|ref|XP_004155424.1| PREDICTED:
           uncharacterized LOC101208378 [Cucumis sativus]
          Length = 400

 Score =  121 bits (304), Expect = 5e-26
 Identities = 53/100 (53%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
 Frame = +3

Query: 51  YSSILPLY---TPTPKPSNLSFKPKHCNFFKGHWILDFKKKPLYNEACPFHRNSWNCIKN 221
           YS  + LY   +P+PK   +S  P  CN FKGHW  D   +P+Y+E CPFHRN+WNC++N
Sbjct: 24  YSLTVSLYAPISPSPKIKKISASPS-CNLFKGHWNRDPNHRPIYDETCPFHRNAWNCLRN 82

Query: 222 QRENMVKINSWKWMPENDCGLEQVDPVKFLEFMRDKSIGF 341
           QR+NM  INSWKW+P+  C L Q+DP +FL+ MR+++IGF
Sbjct: 83  QRDNMGTINSWKWVPQT-CDLPQIDPFRFLDLMRNRNIGF 121


>ref|XP_002264519.2| PREDICTED: uncharacterized protein LOC100254288 [Vitis vinifera]
          Length = 412

 Score =  116 bits (290), Expect = 2e-24
 Identities = 50/106 (47%), Positives = 71/106 (66%), Gaps = 9/106 (8%)
 Frame = +3

Query: 51  YSSILPLYTPTPKPSNLSFKPK---------HCNFFKGHWILDFKKKPLYNEACPFHRNS 203
           YS++LP YT +P  S+ S  P           CN F G+W+ D   +P+Y+E CPFHRN+
Sbjct: 25  YSTLLPFYTHSPTESHNSLTPSTPAFSPSPPQCNLFHGNWVEDPSHEPIYDETCPFHRNA 84

Query: 204 WNCIKNQRENMVKINSWKWMPENDCGLEQVDPVKFLEFMRDKSIGF 341
           WNC+KN+R+NM +INSW+W+P + C   ++DPV FL  MR++ IGF
Sbjct: 85  WNCLKNKRDNMGRINSWRWVP-SGCDFPRIDPVGFLGLMRNRRIGF 129


>emb|CBI38035.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  116 bits (290), Expect = 2e-24
 Identities = 50/106 (47%), Positives = 71/106 (66%), Gaps = 9/106 (8%)
 Frame = +3

Query: 51  YSSILPLYTPTPKPSNLSFKPK---------HCNFFKGHWILDFKKKPLYNEACPFHRNS 203
           YS++LP YT +P  S+ S  P           CN F G+W+ D   +P+Y+E CPFHRN+
Sbjct: 26  YSTLLPFYTHSPTESHNSLTPSTPAFSPSPPQCNLFHGNWVEDPSHEPIYDETCPFHRNA 85

Query: 204 WNCIKNQRENMVKINSWKWMPENDCGLEQVDPVKFLEFMRDKSIGF 341
           WNC+KN+R+NM +INSW+W+P + C   ++DPV FL  MR++ IGF
Sbjct: 86  WNCLKNKRDNMGRINSWRWVP-SGCDFPRIDPVGFLGLMRNRRIGF 130


>emb|CAN59848.1| hypothetical protein VITISV_026675 [Vitis vinifera]
          Length = 232

 Score =  116 bits (290), Expect = 2e-24
 Identities = 50/106 (47%), Positives = 71/106 (66%), Gaps = 9/106 (8%)
 Frame = +3

Query: 51  YSSILPLYTPTPKPSNLSFKPK---------HCNFFKGHWILDFKKKPLYNEACPFHRNS 203
           YS++LP YT +P  S+ S  P           CN F G+W+ D   +P+Y+E CPFHRN+
Sbjct: 25  YSTLLPFYTHSPTESHNSLTPSTPAFSPSPPQCNLFHGNWVEDPSHEPIYDETCPFHRNA 84

Query: 204 WNCIKNQRENMVKINSWKWMPENDCGLEQVDPVKFLEFMRDKSIGF 341
           WNC+KN+R+NM +INSW+W+P + C   ++DPV FL  MR++ IGF
Sbjct: 85  WNCLKNKRDNMGRINSWRWVP-SGCDFPRIDPVGFLGLMRNRRIGF 129


>ref|XP_002300308.1| predicted protein [Populus trichocarpa] gi|222847566|gb|EEE85113.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/97 (54%), Positives = 72/97 (74%), Gaps = 2/97 (2%)
 Frame = +3

Query: 54  SSILPLYTPTPKPSNLSFKPKHCNFFKGHWILDFKK--KPLYNEACPFHRNSWNCIKNQR 227
           +S+LP  T T   +    K   CN FKG+W+LD  K  KPLY+E+CPFHRN+WNC++NQR
Sbjct: 25  TSLLPHSTTT---TTTKTKTTSCNLFKGNWVLDRTKSTKPLYDESCPFHRNAWNCLRNQR 81

Query: 228 ENMVKINSWKWMPENDCGLEQVDPVKFLEFMRDKSIG 338
           ENM  INSW+W+P+ DC L ++DP +FLE MR+++IG
Sbjct: 82  ENMGLINSWRWVPK-DCELPKIDPERFLELMRNRNIG 117


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