BLASTX nr result

ID: Coptis24_contig00016463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016463
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21383.3| unnamed protein product [Vitis vinifera]              198   1e-48
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247...   198   1e-48
ref|XP_003539345.1| PREDICTED: uncharacterized protein LOC100780...   179   6e-43
ref|XP_003516604.1| PREDICTED: uncharacterized protein LOC100799...   179   8e-43
ref|XP_003611682.1| RNA-binding protein with multiple splicing [...   175   1e-41

>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  198 bits (504), Expect = 1e-48
 Identities = 101/147 (68%), Positives = 116/147 (78%), Gaps = 5/147 (3%)
 Frame = -3

Query: 923 DTGVGSNIHMPGMGNSAYNMIGYSSTQSHG-YDSGVAEGAESRRMKSSTPYIPQNSTPCP 747
           D+GVGS +HMPGMGNSAY+MIGY STQSHG +D        ++   SS PY PQN+TPCP
Sbjct: 188 DSGVGS-VHMPGMGNSAYSMIGYPSTQSHGNFDGRALNETPAKLNNSSAPYFPQNATPCP 246

Query: 746 TLFVANLGPTCAEQELIEVFSRCTGFLKLKMQNKNGAPVAFVDFQDIACSTAALNSVQDM 567
           TLFVANLGPTC+EQELI++FSRC GFLKLKMQ+  G PVAFVDFQD  CST ALN +Q  
Sbjct: 247 TLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCSTGALNHLQGT 306

Query: 566 ILYTS-NGEGMRLEYAKSRMG---KPK 498
           +LY+S  GEGMR+EYAKSRMG   KPK
Sbjct: 307 VLYSSPAGEGMRIEYAKSRMGLRRKPK 333


>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
          Length = 336

 Score =  198 bits (504), Expect = 1e-48
 Identities = 101/147 (68%), Positives = 116/147 (78%), Gaps = 5/147 (3%)
 Frame = -3

Query: 923 DTGVGSNIHMPGMGNSAYNMIGYSSTQSHG-YDSGVAEGAESRRMKSSTPYIPQNSTPCP 747
           D+GVGS +HMPGMGNSAY+MIGY STQSHG +D        ++   SS PY PQN+TPCP
Sbjct: 191 DSGVGS-VHMPGMGNSAYSMIGYPSTQSHGNFDGRALNETPAKLNNSSAPYFPQNATPCP 249

Query: 746 TLFVANLGPTCAEQELIEVFSRCTGFLKLKMQNKNGAPVAFVDFQDIACSTAALNSVQDM 567
           TLFVANLGPTC+EQELI++FSRC GFLKLKMQ+  G PVAFVDFQD  CST ALN +Q  
Sbjct: 250 TLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCSTGALNHLQGT 309

Query: 566 ILYTS-NGEGMRLEYAKSRMG---KPK 498
           +LY+S  GEGMR+EYAKSRMG   KPK
Sbjct: 310 VLYSSPAGEGMRIEYAKSRMGLRRKPK 336


>ref|XP_003539345.1| PREDICTED: uncharacterized protein LOC100780983 [Glycine max]
          Length = 338

 Score =  179 bits (455), Expect = 6e-43
 Identities = 100/148 (67%), Positives = 113/148 (76%), Gaps = 5/148 (3%)
 Frame = -3

Query: 923 DTGVGSNIHMPGMGNSAYNM--IGYSSTQSHGYDSGVA--EGAESRRMKSSTPYIPQNST 756
           D+GVGS IHMPGMGN A+N    GY S QS G   G A  +   +   KSSTPYIPQNST
Sbjct: 189 DSGVGS-IHMPGMGNPAFNTNTFGYPSAQSLGNADGSAMSDSLFANLKKSSTPYIPQNST 247

Query: 755 PCPTLFVANLGPTCAEQELIEVFSRCTGFLKLKMQNKNGAPVAFVDFQDIACSTAALNSV 576
           PC TLFVANLGP+C EQELI+VFSR  GFLKLKMQ+  GAPVAFVDFQD+  ST ALNS+
Sbjct: 248 PCATLFVANLGPSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNSL 307

Query: 575 QDMILYTS-NGEGMRLEYAKSRMGKPKK 495
           Q  IL++S +GEGMRLEYAKSRMG  +K
Sbjct: 308 QGTILHSSQSGEGMRLEYAKSRMGMRRK 335


>ref|XP_003516604.1| PREDICTED: uncharacterized protein LOC100799471 [Glycine max]
          Length = 332

 Score =  179 bits (454), Expect = 8e-43
 Identities = 99/148 (66%), Positives = 114/148 (77%), Gaps = 5/148 (3%)
 Frame = -3

Query: 923 DTGVGSNIHMPGMGNSAYN--MIGYSSTQSHGYDSG--VAEGAESRRMKSSTPYIPQNST 756
           D+GVGS IHMPGMGN A+N  M GY S QS G   G  ++ G  +   KSSTPY+PQNST
Sbjct: 183 DSGVGS-IHMPGMGNPAFNTNMFGYPSAQSLGNADGSTMSGGLFANLKKSSTPYVPQNST 241

Query: 755 PCPTLFVANLGPTCAEQELIEVFSRCTGFLKLKMQNKNGAPVAFVDFQDIACSTAALNSV 576
           PC TLFVANLG +C EQELI+VFSR  GFLKLKMQ+  GAPVAFVDFQD+  ST ALNS+
Sbjct: 242 PCATLFVANLGSSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNSL 301

Query: 575 QDMILYTS-NGEGMRLEYAKSRMGKPKK 495
           Q  IL++S +GEGMR+EYAKSRMG  KK
Sbjct: 302 QGTILHSSQSGEGMRVEYAKSRMGMRKK 329


>ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
           gi|355513017|gb|AES94640.1| RNA-binding protein with
           multiple splicing [Medicago truncatula]
          Length = 340

 Score =  175 bits (444), Expect = 1e-41
 Identities = 97/148 (65%), Positives = 111/148 (75%), Gaps = 5/148 (3%)
 Frame = -3

Query: 923 DTGVGSNIHMPGMGNSAYN--MIGYSSTQSHGYDSGVA--EGAESRRMKSSTPYIPQNST 756
           D+GV S+IHMPGMGN A+N  MIGY   QSHG   G A  +G      K S PYIP N+T
Sbjct: 192 DSGV-SSIHMPGMGNPAFNTNMIGYPPAQSHGIADGNAMHDGLFLNLKKCSNPYIPTNTT 250

Query: 755 PCPTLFVANLGPTCAEQELIEVFSRCTGFLKLKMQNKNGAPVAFVDFQDIACSTAALNSV 576
           PC TLFVANLGP+C EQELI+VFSR  GFLKLKMQ+  GAPV+FVDF+DI  +T ALNS+
Sbjct: 251 PCATLFVANLGPSCNEQELIQVFSRFPGFLKLKMQSTYGAPVSFVDFKDIPSATVALNSL 310

Query: 575 QDMILYTS-NGEGMRLEYAKSRMGKPKK 495
           Q  ILY+S  GEGMRLEYAKSRMG  +K
Sbjct: 311 QGTILYSSPAGEGMRLEYAKSRMGMRRK 338


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