BLASTX nr result

ID: Coptis24_contig00016456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016456
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266903.2| PREDICTED: protein FAM188A-like [Vitis vinif...   224   2e-56
emb|CBI18194.3| unnamed protein product [Vitis vinifera]              224   2e-56
ref|XP_003592118.1| Protein FAM188A [Medicago truncatula] gi|355...   215   1e-53
ref|XP_002307495.1| predicted protein [Populus trichocarpa] gi|2...   211   2e-52
ref|XP_002532435.1| protein with unknown function [Ricinus commu...   209   7e-52

>ref|XP_002266903.2| PREDICTED: protein FAM188A-like [Vitis vinifera]
          Length = 337

 Score =  224 bits (572), Expect = 2e-56
 Identities = 107/152 (70%), Positives = 119/152 (78%), Gaps = 2/152 (1%)
 Frame = +2

Query: 2   NLPREKLDNLCGMGFIVWSEFWQVXXXXXXXXXXXXXXTGLMGRKLFDLYHFNGIAKSVL 181
           +LP EKLD+LCG GFIVWSEFWQV              TG MG+K+FDLYHFNGIAKSVL
Sbjct: 186 DLPPEKLDHLCGAGFIVWSEFWQVLLDLDKRFGGLKDPTGSMGKKVFDLYHFNGIAKSVL 245

Query: 182 NGSQATAGGDSPIQRPRLSKLRVSVPPRWTPEEFMTGV--PSSSGGEGSTGKDAVVEVMQ 355
           NGS A +G + PIQRPRL+KLRVSVPPRWTPEEFM  V  PS+SGG   + K+ V+EV +
Sbjct: 246 NGSPAASGSEMPIQRPRLTKLRVSVPPRWTPEEFMADVVLPSASGGNDPSAKETVIEVAK 305

Query: 356 PEPPQHAPLVDCIRTRWARAVCNWVGDPPSIV 451
           PEP QHAPLVDCIRTRW RAVCNWVGDPPSIV
Sbjct: 306 PEPAQHAPLVDCIRTRWPRAVCNWVGDPPSIV 337


>emb|CBI18194.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  224 bits (572), Expect = 2e-56
 Identities = 107/152 (70%), Positives = 119/152 (78%), Gaps = 2/152 (1%)
 Frame = +2

Query: 2   NLPREKLDNLCGMGFIVWSEFWQVXXXXXXXXXXXXXXTGLMGRKLFDLYHFNGIAKSVL 181
           +LP EKLD+LCG GFIVWSEFWQV              TG MG+K+FDLYHFNGIAKSVL
Sbjct: 465 DLPPEKLDHLCGAGFIVWSEFWQVLLDLDKRFGGLKDPTGSMGKKVFDLYHFNGIAKSVL 524

Query: 182 NGSQATAGGDSPIQRPRLSKLRVSVPPRWTPEEFMTGV--PSSSGGEGSTGKDAVVEVMQ 355
           NGS A +G + PIQRPRL+KLRVSVPPRWTPEEFM  V  PS+SGG   + K+ V+EV +
Sbjct: 525 NGSPAASGSEMPIQRPRLTKLRVSVPPRWTPEEFMADVVLPSASGGNDPSAKETVIEVAK 584

Query: 356 PEPPQHAPLVDCIRTRWARAVCNWVGDPPSIV 451
           PEP QHAPLVDCIRTRW RAVCNWVGDPPSIV
Sbjct: 585 PEPAQHAPLVDCIRTRWPRAVCNWVGDPPSIV 616


>ref|XP_003592118.1| Protein FAM188A [Medicago truncatula] gi|355481166|gb|AES62369.1|
           Protein FAM188A [Medicago truncatula]
          Length = 666

 Score =  215 bits (547), Expect = 1e-53
 Identities = 104/151 (68%), Positives = 117/151 (77%), Gaps = 2/151 (1%)
 Frame = +2

Query: 5   LPREKLDNLCGMGFIVWSEFWQVXXXXXXXXXXXXXXTGLMGRKLFDLYHFNGIAKSVLN 184
           LP +KLDNLC  GFIVWSEFWQV              +GLMG+K+FDL+HFNGIAKS LN
Sbjct: 518 LPADKLDNLCSAGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLFHFNGIAKSDLN 577

Query: 185 GSQATAGGDSPIQRPRLSKLRVSVPPRWTPEEFMTGV--PSSSGGEGSTGKDAVVEVMQP 358
           GSQ + GG++P+QRPRL+KL VSVPPRWTPEEFMT V  PS+SG   S GKD   EV +P
Sbjct: 578 GSQVSFGGETPLQRPRLTKLSVSVPPRWTPEEFMTNVQGPSASGASDSAGKD--TEVSKP 635

Query: 359 EPPQHAPLVDCIRTRWARAVCNWVGDPPSIV 451
           EP QHAPLVDCIRTRWARAVC+W GDPPSIV
Sbjct: 636 EPTQHAPLVDCIRTRWARAVCSWSGDPPSIV 666


>ref|XP_002307495.1| predicted protein [Populus trichocarpa] gi|222856944|gb|EEE94491.1|
           predicted protein [Populus trichocarpa]
          Length = 610

 Score =  211 bits (536), Expect = 2e-52
 Identities = 103/151 (68%), Positives = 117/151 (77%), Gaps = 2/151 (1%)
 Frame = +2

Query: 5   LPREKLDNLCGMGFIVWSEFWQVXXXXXXXXXXXXXXTGLMGRKLFDLYHFNGIAKSVLN 184
           LP EKLD+LC  GFIVWSEFWQV              +GLMG+K+FDL HFNGIAKS +N
Sbjct: 462 LPSEKLDHLCSTGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLCHFNGIAKSDIN 521

Query: 185 GSQATAGGDSPIQRPRLSKLRVSVPPRWTPEEFMTGV--PSSSGGEGSTGKDAVVEVMQP 358
           GS AT+GG++ +QRPRL+KLRVSVPPRWTPEEFM  V   S  GG+ S+GKD   EV +P
Sbjct: 522 GSHATSGGETLVQRPRLTKLRVSVPPRWTPEEFMADVVVTSGPGGKESSGKDT--EVTKP 579

Query: 359 EPPQHAPLVDCIRTRWARAVCNWVGDPPSIV 451
           EP QHAPLVDCIRTRW+RAVCNWVGDPPSIV
Sbjct: 580 EPSQHAPLVDCIRTRWSRAVCNWVGDPPSIV 610


>ref|XP_002532435.1| protein with unknown function [Ricinus communis]
           gi|223527855|gb|EEF29950.1| protein with unknown
           function [Ricinus communis]
          Length = 603

 Score =  209 bits (532), Expect = 7e-52
 Identities = 102/151 (67%), Positives = 115/151 (76%), Gaps = 2/151 (1%)
 Frame = +2

Query: 5   LPREKLDNLCGMGFIVWSEFWQVXXXXXXXXXXXXXXTGLMGRKLFDLYHFNGIAKSVLN 184
           LP EKLD+LC  GFIVWSEFWQV              +GLMG+K+FDLYHFNGIAKS L 
Sbjct: 455 LPPEKLDHLCSTGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLYHFNGIAKSDLI 514

Query: 185 GSQATAGGDSPIQRPRLSKLRVSVPPRWTPEEFMTG--VPSSSGGEGSTGKDAVVEVMQP 358
           GS  T+GG++P+QRPRL+KLRVSVPPRWTPEEFM    V S SGG  ++GKD   EV +P
Sbjct: 515 GSHMTSGGETPVQRPRLTKLRVSVPPRWTPEEFMADVVVSSGSGGNEASGKD--TEVTKP 572

Query: 359 EPPQHAPLVDCIRTRWARAVCNWVGDPPSIV 451
           EP QHAPLVDCIRTRW RAVC W+GDPPSIV
Sbjct: 573 EPSQHAPLVDCIRTRWPRAVCTWMGDPPSIV 603


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