BLASTX nr result
ID: Coptis24_contig00016456
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016456 (912 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266903.2| PREDICTED: protein FAM188A-like [Vitis vinif... 224 2e-56 emb|CBI18194.3| unnamed protein product [Vitis vinifera] 224 2e-56 ref|XP_003592118.1| Protein FAM188A [Medicago truncatula] gi|355... 215 1e-53 ref|XP_002307495.1| predicted protein [Populus trichocarpa] gi|2... 211 2e-52 ref|XP_002532435.1| protein with unknown function [Ricinus commu... 209 7e-52 >ref|XP_002266903.2| PREDICTED: protein FAM188A-like [Vitis vinifera] Length = 337 Score = 224 bits (572), Expect = 2e-56 Identities = 107/152 (70%), Positives = 119/152 (78%), Gaps = 2/152 (1%) Frame = +2 Query: 2 NLPREKLDNLCGMGFIVWSEFWQVXXXXXXXXXXXXXXTGLMGRKLFDLYHFNGIAKSVL 181 +LP EKLD+LCG GFIVWSEFWQV TG MG+K+FDLYHFNGIAKSVL Sbjct: 186 DLPPEKLDHLCGAGFIVWSEFWQVLLDLDKRFGGLKDPTGSMGKKVFDLYHFNGIAKSVL 245 Query: 182 NGSQATAGGDSPIQRPRLSKLRVSVPPRWTPEEFMTGV--PSSSGGEGSTGKDAVVEVMQ 355 NGS A +G + PIQRPRL+KLRVSVPPRWTPEEFM V PS+SGG + K+ V+EV + Sbjct: 246 NGSPAASGSEMPIQRPRLTKLRVSVPPRWTPEEFMADVVLPSASGGNDPSAKETVIEVAK 305 Query: 356 PEPPQHAPLVDCIRTRWARAVCNWVGDPPSIV 451 PEP QHAPLVDCIRTRW RAVCNWVGDPPSIV Sbjct: 306 PEPAQHAPLVDCIRTRWPRAVCNWVGDPPSIV 337 >emb|CBI18194.3| unnamed protein product [Vitis vinifera] Length = 616 Score = 224 bits (572), Expect = 2e-56 Identities = 107/152 (70%), Positives = 119/152 (78%), Gaps = 2/152 (1%) Frame = +2 Query: 2 NLPREKLDNLCGMGFIVWSEFWQVXXXXXXXXXXXXXXTGLMGRKLFDLYHFNGIAKSVL 181 +LP EKLD+LCG GFIVWSEFWQV TG MG+K+FDLYHFNGIAKSVL Sbjct: 465 DLPPEKLDHLCGAGFIVWSEFWQVLLDLDKRFGGLKDPTGSMGKKVFDLYHFNGIAKSVL 524 Query: 182 NGSQATAGGDSPIQRPRLSKLRVSVPPRWTPEEFMTGV--PSSSGGEGSTGKDAVVEVMQ 355 NGS A +G + PIQRPRL+KLRVSVPPRWTPEEFM V PS+SGG + K+ V+EV + Sbjct: 525 NGSPAASGSEMPIQRPRLTKLRVSVPPRWTPEEFMADVVLPSASGGNDPSAKETVIEVAK 584 Query: 356 PEPPQHAPLVDCIRTRWARAVCNWVGDPPSIV 451 PEP QHAPLVDCIRTRW RAVCNWVGDPPSIV Sbjct: 585 PEPAQHAPLVDCIRTRWPRAVCNWVGDPPSIV 616 >ref|XP_003592118.1| Protein FAM188A [Medicago truncatula] gi|355481166|gb|AES62369.1| Protein FAM188A [Medicago truncatula] Length = 666 Score = 215 bits (547), Expect = 1e-53 Identities = 104/151 (68%), Positives = 117/151 (77%), Gaps = 2/151 (1%) Frame = +2 Query: 5 LPREKLDNLCGMGFIVWSEFWQVXXXXXXXXXXXXXXTGLMGRKLFDLYHFNGIAKSVLN 184 LP +KLDNLC GFIVWSEFWQV +GLMG+K+FDL+HFNGIAKS LN Sbjct: 518 LPADKLDNLCSAGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLFHFNGIAKSDLN 577 Query: 185 GSQATAGGDSPIQRPRLSKLRVSVPPRWTPEEFMTGV--PSSSGGEGSTGKDAVVEVMQP 358 GSQ + GG++P+QRPRL+KL VSVPPRWTPEEFMT V PS+SG S GKD EV +P Sbjct: 578 GSQVSFGGETPLQRPRLTKLSVSVPPRWTPEEFMTNVQGPSASGASDSAGKD--TEVSKP 635 Query: 359 EPPQHAPLVDCIRTRWARAVCNWVGDPPSIV 451 EP QHAPLVDCIRTRWARAVC+W GDPPSIV Sbjct: 636 EPTQHAPLVDCIRTRWARAVCSWSGDPPSIV 666 >ref|XP_002307495.1| predicted protein [Populus trichocarpa] gi|222856944|gb|EEE94491.1| predicted protein [Populus trichocarpa] Length = 610 Score = 211 bits (536), Expect = 2e-52 Identities = 103/151 (68%), Positives = 117/151 (77%), Gaps = 2/151 (1%) Frame = +2 Query: 5 LPREKLDNLCGMGFIVWSEFWQVXXXXXXXXXXXXXXTGLMGRKLFDLYHFNGIAKSVLN 184 LP EKLD+LC GFIVWSEFWQV +GLMG+K+FDL HFNGIAKS +N Sbjct: 462 LPSEKLDHLCSTGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLCHFNGIAKSDIN 521 Query: 185 GSQATAGGDSPIQRPRLSKLRVSVPPRWTPEEFMTGV--PSSSGGEGSTGKDAVVEVMQP 358 GS AT+GG++ +QRPRL+KLRVSVPPRWTPEEFM V S GG+ S+GKD EV +P Sbjct: 522 GSHATSGGETLVQRPRLTKLRVSVPPRWTPEEFMADVVVTSGPGGKESSGKDT--EVTKP 579 Query: 359 EPPQHAPLVDCIRTRWARAVCNWVGDPPSIV 451 EP QHAPLVDCIRTRW+RAVCNWVGDPPSIV Sbjct: 580 EPSQHAPLVDCIRTRWSRAVCNWVGDPPSIV 610 >ref|XP_002532435.1| protein with unknown function [Ricinus communis] gi|223527855|gb|EEF29950.1| protein with unknown function [Ricinus communis] Length = 603 Score = 209 bits (532), Expect = 7e-52 Identities = 102/151 (67%), Positives = 115/151 (76%), Gaps = 2/151 (1%) Frame = +2 Query: 5 LPREKLDNLCGMGFIVWSEFWQVXXXXXXXXXXXXXXTGLMGRKLFDLYHFNGIAKSVLN 184 LP EKLD+LC GFIVWSEFWQV +GLMG+K+FDLYHFNGIAKS L Sbjct: 455 LPPEKLDHLCSTGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLYHFNGIAKSDLI 514 Query: 185 GSQATAGGDSPIQRPRLSKLRVSVPPRWTPEEFMTG--VPSSSGGEGSTGKDAVVEVMQP 358 GS T+GG++P+QRPRL+KLRVSVPPRWTPEEFM V S SGG ++GKD EV +P Sbjct: 515 GSHMTSGGETPVQRPRLTKLRVSVPPRWTPEEFMADVVVSSGSGGNEASGKD--TEVTKP 572 Query: 359 EPPQHAPLVDCIRTRWARAVCNWVGDPPSIV 451 EP QHAPLVDCIRTRW RAVC W+GDPPSIV Sbjct: 573 EPSQHAPLVDCIRTRWPRAVCTWMGDPPSIV 603