BLASTX nr result

ID: Coptis24_contig00016453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016453
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530551.1| Serine/threonine-protein kinase PBS1, putati...   184   1e-80
ref|XP_002309825.1| predicted protein [Populus trichocarpa] gi|2...   184   3e-80
ref|XP_002272354.2| PREDICTED: PTI1-like tyrosine-protein kinase...   180   2e-79
emb|CBI39170.3| unnamed protein product [Vitis vinifera]              180   2e-79
ref|XP_004152286.1| PREDICTED: PTI1-like tyrosine-protein kinase...   180   3e-79

>ref|XP_002530551.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
           gi|223529913|gb|EEF31842.1| Serine/threonine-protein
           kinase PBS1, putative [Ricinus communis]
          Length = 406

 Score =  184 bits (466), Expect(2) = 1e-80
 Identities = 99/156 (63%), Positives = 114/156 (73%), Gaps = 9/156 (5%)
 Frame = +3

Query: 324 GQPKTGSSQKGSKLTPASNEVPTV----LTLDELKEKTNNFGSKSLIGEGRYASVYSGKL 491
           G P  GS       +    E P +    L+L+ELKEKT+NFGSK+LIGEG Y  VY   L
Sbjct: 70  GNPVKGSKVSAPVRSEVQKEAPPIEVPALSLEELKEKTDNFGSKALIGEGSYGRVYYANL 129

Query: 492 DSGKAVAIKKLDPSSI--SDF*FLAKVSMASRLKHDNFVQLLGYCVEGNIRVLAYEFATR 665
           D+GKAVA+KKLD +S   S+  FL +VSM SRLKHDN V+LLGYCVEGN+RVLAYEFAT 
Sbjct: 130 DNGKAVAVKKLDVASEQESNVEFLTQVSMVSRLKHDNVVELLGYCVEGNLRVLAYEFATM 189

Query: 666 GSLHDMLH---GVRGTQPGPVLDWMQRVTIAVDAAR 764
           GSLHD+LH   GV+G QPGP LDWMQRV IAVDAAR
Sbjct: 190 GSLHDILHGRKGVQGAQPGPTLDWMQRVKIAVDAAR 225



 Score =  143 bits (361), Expect(2) = 1e-80
 Identities = 75/111 (67%), Positives = 89/111 (80%), Gaps = 6/111 (5%)
 Frame = +1

Query: 760  RGLEYLHKSNQ---IHGKIRSSNVLLFEDFKAKIADPSL---APDMVPRLLSSGVVATYG 921
            RGLEYLH+  Q   IH  IRSSNVLLFEDFKAKIAD +L   APDM  RL S+ V+ T+G
Sbjct: 225  RGLEYLHEKVQPAIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 284

Query: 922  YHAPEFALSPQLMQKTDVYSFGIILLELLSGRNPFDLTMPQGQQSLVTWVS 1074
            YHAPE+A++ QL QK+DVYSFG++LLELL+GR P D TMP+GQQSLVTW +
Sbjct: 285  YHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWAT 335


>ref|XP_002309825.1| predicted protein [Populus trichocarpa] gi|222852728|gb|EEE90275.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score =  184 bits (466), Expect(2) = 3e-80
 Identities = 102/152 (67%), Positives = 119/152 (78%), Gaps = 14/152 (9%)
 Frame = +3

Query: 351 KGSKLT-PASNEVPT--------VLTLDELKEKTNNFGSKSLIGEGRYASVYSGKLDSGK 503
           KGSK++ PA  EV          VL+L+ELKEKT+NFGSK+LIGEG Y  VY   L++GK
Sbjct: 35  KGSKVSAPAKAEVQKEAPPVEVPVLSLEELKEKTDNFGSKALIGEGSYGRVYYANLENGK 94

Query: 504 AVAIKKLDPSSI--SDF*FLAKVSMASRLKHDNFVQLLGYCVEGNIRVLAYEFATRGSLH 677
           AVAIKKLD +S   ++  FL +VSM SRLKH+NFV+LLGYCVEGN+RVLAYEFAT GSLH
Sbjct: 95  AVAIKKLDVASEPETNVEFLTQVSMVSRLKHENFVELLGYCVEGNLRVLAYEFATMGSLH 154

Query: 678 DMLH---GVRGTQPGPVLDWMQRVTIAVDAAR 764
           D+LH   GV+G QPGPVLDWMQRV IAVDAAR
Sbjct: 155 DILHGRKGVQGAQPGPVLDWMQRVRIAVDAAR 186



 Score =  142 bits (358), Expect(2) = 3e-80
 Identities = 73/111 (65%), Positives = 89/111 (80%), Gaps = 6/111 (5%)
 Frame = +1

Query: 760  RGLEYLHKSNQ---IHGKIRSSNVLLFEDFKAKIADPSL---APDMVPRLLSSGVVATYG 921
            RG+EYLH+  Q   IH  +RSSNVLLFEDFKAKIAD +L   APDM  RL S+ V+ T+G
Sbjct: 186  RGMEYLHEKVQPAVIHRDVRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 245

Query: 922  YHAPEFALSPQLMQKTDVYSFGIILLELLSGRNPFDLTMPQGQQSLVTWVS 1074
            YHAPE+A++ QL QK+DVYSFG++LLELL+GR P D TMP+GQQSLVTW +
Sbjct: 246  YHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWAT 296


>ref|XP_002272354.2| PREDICTED: PTI1-like tyrosine-protein kinase 3 [Vitis vinifera]
          Length = 495

 Score =  180 bits (456), Expect(2) = 2e-79
 Identities = 107/182 (58%), Positives = 127/182 (69%), Gaps = 18/182 (9%)
 Frame = +3

Query: 273 TCHAA----NLGSLLLFIPRWGQPKTGSSQKGSKLT-PASNEVPTV--------LTLDEL 413
           TCH      +  S LL  PR     T  + KGSK++ P  +EV           L+L+EL
Sbjct: 141 TCHVEEPYQSNESELLKSPR---NHTDGNPKGSKVSAPVRSEVQKTAPPIEVPELSLEEL 197

Query: 414 KEKTNNFGSKSLIGEGRYASVYSGKLDSGKAVAIKKLDPSSISD--F*FLAKVSMASRLK 587
           KEKT+NFGSK+LIGEG Y  VY   L++GKAVA+KKLD SS  +    FL +VSM SRLK
Sbjct: 198 KEKTDNFGSKALIGEGSYGRVYYASLNNGKAVAVKKLDVSSEPETPVEFLTQVSMVSRLK 257

Query: 588 HDNFVQLLGYCVEGNIRVLAYEFATRGSLHDMLH---GVRGTQPGPVLDWMQRVTIAVDA 758
           H+N V+LLGYCV+GN+RVLAYEFAT GSLHD+LH   GV+G QPGPVLDWMQRV IAVDA
Sbjct: 258 HENLVELLGYCVDGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMQRVRIAVDA 317

Query: 759 AR 764
           AR
Sbjct: 318 AR 319



 Score =  143 bits (361), Expect(2) = 2e-79
 Identities = 75/111 (67%), Positives = 89/111 (80%), Gaps = 6/111 (5%)
 Frame = +1

Query: 760  RGLEYLHKSNQ---IHGKIRSSNVLLFEDFKAKIADPSL---APDMVPRLLSSGVVATYG 921
            RGLEYLH+  Q   IH  IRSSNVLLFEDFKAKIAD +L   APDM  RL S+ V+ T+G
Sbjct: 319  RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 378

Query: 922  YHAPEFALSPQLMQKTDVYSFGIILLELLSGRNPFDLTMPQGQQSLVTWVS 1074
            YHAPE+A++ QL QK+DVYSFG++LLELL+GR P D TMP+GQQSLVTW +
Sbjct: 379  YHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWAT 429


>emb|CBI39170.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  180 bits (456), Expect(2) = 2e-79
 Identities = 107/182 (58%), Positives = 127/182 (69%), Gaps = 18/182 (9%)
 Frame = +3

Query: 273 TCHAA----NLGSLLLFIPRWGQPKTGSSQKGSKLT-PASNEVPTV--------LTLDEL 413
           TCH      +  S LL  PR     T  + KGSK++ P  +EV           L+L+EL
Sbjct: 47  TCHVEEPYQSNESELLKSPR---NHTDGNPKGSKVSAPVRSEVQKTAPPIEVPELSLEEL 103

Query: 414 KEKTNNFGSKSLIGEGRYASVYSGKLDSGKAVAIKKLDPSSISD--F*FLAKVSMASRLK 587
           KEKT+NFGSK+LIGEG Y  VY   L++GKAVA+KKLD SS  +    FL +VSM SRLK
Sbjct: 104 KEKTDNFGSKALIGEGSYGRVYYASLNNGKAVAVKKLDVSSEPETPVEFLTQVSMVSRLK 163

Query: 588 HDNFVQLLGYCVEGNIRVLAYEFATRGSLHDMLH---GVRGTQPGPVLDWMQRVTIAVDA 758
           H+N V+LLGYCV+GN+RVLAYEFAT GSLHD+LH   GV+G QPGPVLDWMQRV IAVDA
Sbjct: 164 HENLVELLGYCVDGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMQRVRIAVDA 223

Query: 759 AR 764
           AR
Sbjct: 224 AR 225



 Score =  143 bits (361), Expect(2) = 2e-79
 Identities = 75/111 (67%), Positives = 89/111 (80%), Gaps = 6/111 (5%)
 Frame = +1

Query: 760  RGLEYLHKSNQ---IHGKIRSSNVLLFEDFKAKIADPSL---APDMVPRLLSSGVVATYG 921
            RGLEYLH+  Q   IH  IRSSNVLLFEDFKAKIAD +L   APDM  RL S+ V+ T+G
Sbjct: 225  RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 284

Query: 922  YHAPEFALSPQLMQKTDVYSFGIILLELLSGRNPFDLTMPQGQQSLVTWVS 1074
            YHAPE+A++ QL QK+DVYSFG++LLELL+GR P D TMP+GQQSLVTW +
Sbjct: 285  YHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWAT 335


>ref|XP_004152286.1| PREDICTED: PTI1-like tyrosine-protein kinase 3-like [Cucumis
           sativus] gi|449502300|ref|XP_004161602.1| PREDICTED:
           PTI1-like tyrosine-protein kinase 3-like [Cucumis
           sativus]
          Length = 471

 Score =  180 bits (456), Expect(2) = 3e-79
 Identities = 97/138 (70%), Positives = 109/138 (78%), Gaps = 5/138 (3%)
 Frame = +3

Query: 366 TPASNEVPTVLTLDELKEKTNNFGSKSLIGEGRYASVYSGKLDSGKAVAIKKLDPSSISD 545
           TP   EVP  L+L+ELKEKT+NFGSK+LIGEG Y  VY   L+ GKAVA+KKLD SS  D
Sbjct: 157 TPPPIEVPA-LSLEELKEKTDNFGSKALIGEGSYGRVYYASLNDGKAVAVKKLDVSSEPD 215

Query: 546 --F*FLAKVSMASRLKHDNFVQLLGYCVEGNIRVLAYEFATRGSLHDMLH---GVRGTQP 710
               FL +VS  SRLKH+NFV+L GYCVEGN+RVLAYEFAT GSLHD+LH   GV+G QP
Sbjct: 216 SSVDFLTQVSTVSRLKHENFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQP 275

Query: 711 GPVLDWMQRVTIAVDAAR 764
           GPVLDWMQRV IAVDAAR
Sbjct: 276 GPVLDWMQRVRIAVDAAR 293



 Score =  143 bits (360), Expect(2) = 3e-79
 Identities = 74/111 (66%), Positives = 89/111 (80%), Gaps = 6/111 (5%)
 Frame = +1

Query: 760  RGLEYLHKSNQ---IHGKIRSSNVLLFEDFKAKIADPSL---APDMVPRLLSSGVVATYG 921
            RGLEYLH+  Q   IH  +RSSNVLLFEDFKAKIAD +L   APDM  RL S+ V+ T+G
Sbjct: 293  RGLEYLHEKVQPSIIHRDVRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 352

Query: 922  YHAPEFALSPQLMQKTDVYSFGIILLELLSGRNPFDLTMPQGQQSLVTWVS 1074
            YHAPE+A++ QL QK+DVYSFG++LLELL+GR P D TMP+GQQSLVTW +
Sbjct: 353  YHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWAT 403


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