BLASTX nr result

ID: Coptis24_contig00016451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016451
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302675.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple...   140   1e-31
emb|CBI38713.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved ol...   136   2e-30
ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi comple...   136   2e-30

>ref|XP_002302675.1| predicted protein [Populus trichocarpa] gi|222844401|gb|EEE81948.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/81 (90%), Positives = 78/81 (96%)
 Frame = -1

Query: 243 EILSLTQLGEDYTEFMVSKIRGLSSVDPELGPRATKTFKSGTFSRVVQDITGFYVILEEF 64
           EILSL QLGEDYTEFMVSKI+GLSSVDPEL PRATK+F+SG+FSRVVQ+ITGFYVILE F
Sbjct: 374 EILSLMQLGEDYTEFMVSKIKGLSSVDPELVPRATKSFRSGSFSRVVQEITGFYVILEGF 433

Query: 63  FMVENVRKAIKIDEHVPDSLT 1
           FMVENVRKAIKIDEHVPDSLT
Sbjct: 434 FMVENVRKAIKIDEHVPDSLT 454


>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
           vinifera]
          Length = 1105

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/81 (85%), Positives = 74/81 (91%)
 Frame = -1

Query: 243 EILSLTQLGEDYTEFMVSKIRGLSSVDPELGPRATKTFKSGTFSRVVQDITGFYVILEEF 64
           EILSL QLGEDYTEFMVS I+GLSSVDPELGPRATK F++G FSR +QDITG+YVILE F
Sbjct: 716 EILSLMQLGEDYTEFMVSTIKGLSSVDPELGPRATKAFRNGNFSRSIQDITGYYVILEGF 775

Query: 63  FMVENVRKAIKIDEHVPDSLT 1
           FMVENVRKAI IDEHVPDSLT
Sbjct: 776 FMVENVRKAINIDEHVPDSLT 796


>emb|CBI38713.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/81 (85%), Positives = 74/81 (91%)
 Frame = -1

Query: 243 EILSLTQLGEDYTEFMVSKIRGLSSVDPELGPRATKTFKSGTFSRVVQDITGFYVILEEF 64
           EILSL QLGEDYTEFMVS I+GLSSVDPELGPRATK F++G FSR +QDITG+YVILE F
Sbjct: 318 EILSLMQLGEDYTEFMVSTIKGLSSVDPELGPRATKAFRNGNFSRSIQDITGYYVILEGF 377

Query: 63  FMVENVRKAIKIDEHVPDSLT 1
           FMVENVRKAI IDEHVPDSLT
Sbjct: 378 FMVENVRKAINIDEHVPDSLT 398


>ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex
           subunit 4-like [Cucumis sativus]
          Length = 751

 Score =  136 bits (343), Expect = 2e-30
 Identities = 68/81 (83%), Positives = 74/81 (91%)
 Frame = -1

Query: 243 EILSLTQLGEDYTEFMVSKIRGLSSVDPELGPRATKTFKSGTFSRVVQDITGFYVILEEF 64
           E+L L QLGEDYTEFMVSKI+GLSS+DPEL PRATK F+SG+FS+ VQDITGFYVILE F
Sbjct: 362 ELLMLMQLGEDYTEFMVSKIKGLSSIDPELVPRATKAFRSGSFSKAVQDITGFYVILEGF 421

Query: 63  FMVENVRKAIKIDEHVPDSLT 1
           FMVENVRKAIKIDE VPDSLT
Sbjct: 422 FMVENVRKAIKIDEPVPDSLT 442


>ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like
           [Cucumis sativus]
          Length = 751

 Score =  136 bits (343), Expect = 2e-30
 Identities = 68/81 (83%), Positives = 74/81 (91%)
 Frame = -1

Query: 243 EILSLTQLGEDYTEFMVSKIRGLSSVDPELGPRATKTFKSGTFSRVVQDITGFYVILEEF 64
           E+L L QLGEDYTEFMVSKI+GLSS+DPEL PRATK F+SG+FS+ VQDITGFYVILE F
Sbjct: 362 ELLMLMQLGEDYTEFMVSKIKGLSSIDPELVPRATKAFRSGSFSKAVQDITGFYVILEGF 421

Query: 63  FMVENVRKAIKIDEHVPDSLT 1
           FMVENVRKAIKIDE VPDSLT
Sbjct: 422 FMVENVRKAIKIDEPVPDSLT 442


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