BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016439
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539142.1| PREDICTED: ribosomal RNA small subunit methy...    60   1e-09
ref|XP_003544633.1| PREDICTED: ribosomal RNA small subunit methy...    60   5e-09
ref|XP_003550144.1| PREDICTED: ribosomal RNA small subunit methy...    60   4e-08
ref|XP_004136324.1| PREDICTED: ribosomal RNA small subunit methy...    55   6e-07
ref|XP_002306643.1| predicted protein [Populus trichocarpa] gi|2...    55   1e-06

>ref|XP_003539142.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
           [Glycine max]
          Length = 418

 Score = 59.7 bits (143), Expect(2) = 1e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 145 QASLKAEDILYLWPEAEVGPILREYGEESNQNHLQKKL 32
           QASLKAEDIL  WP++EVG ILREYGEESN   LQKK+
Sbjct: 217 QASLKAEDILNSWPDSEVGRILREYGEESNWRTLQKKI 254



 Score = 27.3 bits (59), Expect(2) = 1e-09
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -2

Query: 41  KKIMNARSYGGLH 3
           KKI+NAR YGGLH
Sbjct: 252 KKIVNARLYGGLH 264


>ref|XP_003544633.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
           [Glycine max]
          Length = 418

 Score = 59.7 bits (143), Expect(2) = 5e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 145 QASLKAEDILYLWPEAEVGPILREYGEESNQNHLQKKL 32
           QASLKAEDIL  WP++EVG ILREYGEESN   LQKK+
Sbjct: 217 QASLKAEDILNSWPDSEVGRILREYGEESNWRTLQKKI 254



 Score = 25.4 bits (54), Expect(2) = 5e-09
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 41  KKIMNARSYGGLH 3
           KKI+NAR +GGLH
Sbjct: 252 KKIVNARLHGGLH 264


>ref|XP_003550144.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
           [Glycine max]
          Length = 315

 Score = 59.7 bits (143), Expect(2) = 4e-08
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 145 QASLKAEDILYLWPEAEVGPILREYGEESNQNHLQKKL 32
           QASLKAEDIL  WP++EVG ILREYGEESN   LQKK+
Sbjct: 102 QASLKAEDILNSWPDSEVGRILREYGEESNWRTLQKKI 139



 Score = 22.3 bits (46), Expect(2) = 4e-08
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 41  KKIMNARSYGGL 6
           KKI+NAR +GGL
Sbjct: 137 KKIVNARLHGGL 148


>ref|XP_004136324.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
           [Cucumis sativus] gi|449505500|ref|XP_004162490.1|
           PREDICTED: ribosomal RNA small subunit methyltransferase
           H-like [Cucumis sativus]
          Length = 448

 Score = 55.1 bits (131), Expect(2) = 6e-07
 Identities = 28/38 (73%), Positives = 29/38 (76%)
 Frame = -3

Query: 145 QASLKAEDILYLWPEAEVGPILREYGEESNQNHLQKKL 32
           QASLKAEDIL  WPE EVG ILR YGEESN   LQ K+
Sbjct: 249 QASLKAEDILNNWPETEVGRILRVYGEESNWYSLQNKI 286



 Score = 23.1 bits (48), Expect(2) = 6e-07
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 50  SSSKKIMNARSYGGLH 3
           S   KI+ ARS GGLH
Sbjct: 281 SLQNKIVKARSQGGLH 296


>ref|XP_002306643.1| predicted protein [Populus trichocarpa] gi|222856092|gb|EEE93639.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 54.7 bits (130), Expect(2) = 1e-06
 Identities = 26/38 (68%), Positives = 31/38 (81%)
 Frame = -3

Query: 145 QASLKAEDILYLWPEAEVGPILREYGEESNQNHLQKKL 32
           +AS+KA+DIL  WP+ EVG ILREYGEESN   LQKK+
Sbjct: 230 RASVKAKDILNYWPDDEVGRILREYGEESNWRWLQKKI 267



 Score = 22.7 bits (47), Expect(2) = 1e-06
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 41  KKIMNARSYGGLH 3
           KKI+ AR  GGLH
Sbjct: 265 KKIVQARQQGGLH 277