BLASTX nr result

ID: Coptis24_contig00016430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016430
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522767.1| PREDICTED: uncharacterized protein LOC100798...   116   5e-24
ref|XP_002525082.1| conserved hypothetical protein [Ricinus comm...   114   3e-23
ref|XP_003592756.1| hypothetical protein MTR_1g115740 [Medicago ...   112   1e-22
ref|XP_003526550.1| PREDICTED: uncharacterized protein LOC100781...   111   2e-22
ref|XP_002315263.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-21

>ref|XP_003522767.1| PREDICTED: uncharacterized protein LOC100798145 [Glycine max]
          Length = 188

 Score =  116 bits (291), Expect = 5e-24
 Identities = 68/198 (34%), Positives = 98/198 (49%)
 Frame = -2

Query: 721 MASSSTVQLSNPFHYXXXXXXXXXSIKQQRHKPSLSFTTRATDPEIEAKTTETETPQDSE 542
           M +S +V+LS PF            +   +  P   FT RAT+PE     ++   P+   
Sbjct: 3   MLASPSVKLSLPF-----------PLSSSKPNPRRPFTIRATEPETPLSGSDPSQPEPDP 51

Query: 541 DNESFENRLAQVRLRYKSXXXXXXXXXXXXXXXXXXXXXXGANGKALFLPPVPLKEPVSS 362
            +++F++R+ Q+RLRY+S                        +G  ++LPPVPLKEPVS 
Sbjct: 52  SDDAFDDRINQLRLRYRSGTGKKAELRKNKKSKKGTS----GSGSGMYLPPVPLKEPVSG 107

Query: 361 GVKVEMGFSRYTERXXXXXXXXXXXXXXXXXXXXGKSVIKYHSPSIVFIQLYXXXXXXXX 182
           GVKVE+GFS+Y+ER                    GK VI YH+P+I+ IQ+Y        
Sbjct: 108 GVKVELGFSQYSERLNGRIAILGLAALVLVELATGKGVINYHTPAIILIQIYFVAAVGAV 167

Query: 181 XXXFEKERVSVWPNTQSS 128
              +EKE++SVWP T SS
Sbjct: 168 FVKYEKEKISVWPQTDSS 185


>ref|XP_002525082.1| conserved hypothetical protein [Ricinus communis]
           gi|223535663|gb|EEF37329.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score =  114 bits (285), Expect = 3e-23
 Identities = 71/167 (42%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
 Frame = -2

Query: 634 RHKPSLSFTTRAT---DPEIEAKTTETETPQDSEDNESFENRLAQVRLRYKSXXXXXXXX 464
           + KP LSFTTRAT   DP+ E++T+      DS D++ FE+RL+ VRLRY+S        
Sbjct: 29  KSKPYLSFTTRATTDDDPQPESQTSRPAPGSDS-DSDPFESRLSNVRLRYRSGTGKKAEV 87

Query: 463 XXXXXXXXXXXXXXGANGKALFLPPVPLKEPVSSGVKVEMGFSRYTERXXXXXXXXXXXX 284
                            G  L+LPPVPLKE VS GVKVE GFSRYTER            
Sbjct: 88  RKSKKGVSKS-----GTGSGLYLPPVPLKEAVSGGVKVEFGFSRYTERVNGRIAILGLTA 142

Query: 283 XXXXXXXXGKSVIKYHSPSIVFIQLYXXXXXXXXXXXFEKERVSVWP 143
                   GK VI YH+P++V IQ+Y           +EKE+VSVWP
Sbjct: 143 LLLVELATGKGVINYHTPAVVLIQVYLVAAVSALYIKYEKEKVSVWP 189


>ref|XP_003592756.1| hypothetical protein MTR_1g115740 [Medicago truncatula]
           gi|217074914|gb|ACJ85817.1| unknown [Medicago
           truncatula] gi|355481804|gb|AES63007.1| hypothetical
           protein MTR_1g115740 [Medicago truncatula]
           gi|388494788|gb|AFK35460.1| unknown [Medicago
           truncatula]
          Length = 191

 Score =  112 bits (280), Expect = 1e-22
 Identities = 70/196 (35%), Positives = 95/196 (48%)
 Frame = -2

Query: 715 SSSTVQLSNPFHYXXXXXXXXXSIKQQRHKPSLSFTTRATDPEIEAKTTETETPQDSEDN 536
           ++++VQLSNPF             K    +P L FTTRAT+P+     ++   P  +   
Sbjct: 5   ATASVQLSNPFPLSSSS-------KSLLRRPFLLFTTRATEPQTPPSDSDPSEP--TATG 55

Query: 535 ESFENRLAQVRLRYKSXXXXXXXXXXXXXXXXXXXXXXGANGKALFLPPVPLKEPVSSGV 356
           E F++R+ Q+R+RYK                         +G  ++LPPVPLKEPVS G+
Sbjct: 56  EDFDDRINQLRIRYKRGTGKKAEIRKSKKSNKAASGSGPGSG--VYLPPVPLKEPVSGGL 113

Query: 355 KVEMGFSRYTERXXXXXXXXXXXXXXXXXXXXGKSVIKYHSPSIVFIQLYXXXXXXXXXX 176
           KVE+GFSRY+ER                    GK VI YH+P  V IQLY          
Sbjct: 114 KVELGFSRYSERLNGRIALLGLTALLLVELATGKGVINYHTPGTVIIQLYFMASVTAIYV 173

Query: 175 XFEKERVSVWPNTQSS 128
             EKE++SVWP+  SS
Sbjct: 174 KLEKEKISVWPDNSSS 189


>ref|XP_003526550.1| PREDICTED: uncharacterized protein LOC100781025 [Glycine max]
          Length = 189

 Score =  111 bits (278), Expect = 2e-22
 Identities = 68/199 (34%), Positives = 96/199 (48%)
 Frame = -2

Query: 724 MMASSSTVQLSNPFHYXXXXXXXXXSIKQQRHKPSLSFTTRATDPEIEAKTTETETPQDS 545
           M+AS  +V+LS  F            +   +  P   FT RA +PE     ++    +  
Sbjct: 3   MLASPPSVKLSLSF-----------PLSASKPNPRRLFTIRAAEPETPPSGSDQSQAEPD 51

Query: 544 EDNESFENRLAQVRLRYKSXXXXXXXXXXXXXXXXXXXXXXGANGKALFLPPVPLKEPVS 365
             +++F++R+ Q+RLRY+S                        +G  +FLPPVPLKEPVS
Sbjct: 52  PSDDTFDDRINQLRLRYRSGTGKKAELRKNKKSKKGTS----GSGSGVFLPPVPLKEPVS 107

Query: 364 SGVKVEMGFSRYTERXXXXXXXXXXXXXXXXXXXXGKSVIKYHSPSIVFIQLYXXXXXXX 185
            GVKVE+GFS+Y+ER                    GK VI YHSP+I+ IQ+Y       
Sbjct: 108 GGVKVELGFSQYSERLNGRIAILGLTALLLVELATGKGVINYHSPAIILIQIYFVAAVGA 167

Query: 184 XXXXFEKERVSVWPNTQSS 128
               +EKE++SVWP T SS
Sbjct: 168 VFVKYEKEKISVWPQTDSS 186


>ref|XP_002315263.1| predicted protein [Populus trichocarpa] gi|222864303|gb|EEF01434.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  108 bits (269), Expect = 2e-21
 Identities = 65/170 (38%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
 Frame = -2

Query: 631 HKPSLSFTTRATDPEIEAKTT-ETETPQDSEDNESFENRLAQVRLRYKSXXXXXXXXXXX 455
           H P  SFTTRAT  + +  TT E ++   S  ++ FE+RL+QVRLRY+S           
Sbjct: 26  HVPKHSFTTRATTDDNKPGTTQEPDSKPGSASDDQFESRLSQVRLRYRSGTGKKAELRKA 85

Query: 454 XXXXXXXXXXXGANGKALFLPPVPLKEPVSSGVKVEMGFSRYTERXXXXXXXXXXXXXXX 275
                        +G  ++LPPVPLKE VS G+KVE+GFS Y+ER               
Sbjct: 86  KKGKSSS-----GSGSGMYLPPVPLKESVSGGLKVELGFSPYSERVNGRIAILGLSALLL 140

Query: 274 XXXXXGKSVIKYHSPSIVFIQLYXXXXXXXXXXXFEKERVSVWPNTQSSL 125
                GKSVI YH+P+IV IQ+Y           +EKE+VS+WP +  ++
Sbjct: 141 VELATGKSVINYHTPAIVLIQVYFVTAATALYVKYEKEKVSIWPESAPNM 190


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