BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016428
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   189   6e-53
emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]   202   1e-51
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   196   7e-50
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]           189   3e-48
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]   192   9e-47

>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  189 bits (479), Expect(3) = 6e-53
 Identities = 101/263 (38%), Positives = 141/263 (53%), Gaps = 5/263 (1%)
 Frame = -3

Query: 862  IDDYTRYTWIFPMKHKHEVLTHFQTFHNCVQNIFNTRVKYFQSVGGGEYVNNPFGTYCRQ 683
            IDDY+RY+W++P+  K +V   F  F    + +F+T +K  Q+  GGE+ +N F  +   
Sbjct: 542  IDDYSRYSWLYPLHRKSDVFATFVKFKTIAEKLFSTSIKQIQTDNGGEFTSNQFKQFLTA 601

Query: 682  MGIHHRLSCPHTPEQNGLAERKHRHIADMAHTLLATAHVPLNLWVEAVSTAVFLINRLPS 503
             GI HRL+CPHT +QNG+ ERKHRHI +M  TLLA + +    WV+A  T+VFLINRLP+
Sbjct: 602  QGIFHRLTCPHTSQQNGIVERKHRHIQEMGLTLLAQSSLSPQYWVDAFLTSVFLINRLPT 661

Query: 502  PLLQWTNPYARLFGHSPSYSDXXXXXXXXXXXXXXXXXXRSHHELL-----SVFLGYGAQ 338
             +L    PY  L    P+Y D                   + H+L       +FLGY   
Sbjct: 662  KVLDNLTPYFLLHKTEPTYMD----LRVFGCACYPLLRPYNDHKLTFRSKKCIFLGYSNC 717

Query: 337  HKGYRCLDLATNRLYISRHVRFEETSFPFAQXXXXXXXXXSTEYVELDLTPIVTPTVQPF 158
             KGYRCLDLAT R+YISRHV F+E SFP            + E  E   +    P     
Sbjct: 718  QKGYRCLDLATKRVYISRHVIFDEHSFP------------AKELAEYTTSRRTNPPADIV 765

Query: 157  VSPVASTPSVLPDQSLLHAAPLI 89
            + P++ +P VLP+   +   P++
Sbjct: 766  IPPISHSPQVLPEXDNISNNPIV 788



 Score = 34.3 bits (77), Expect(3) = 6e-53
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = -2

Query: 1055 SNKLLSSDFQLKHSFCKGCALGKSTHLPFKNSNEISATFPFSLV 924
            SNKL       K  FC  C LGK+  LPF  S+  S+  P +L+
Sbjct: 478  SNKLSVKGSSTKLEFCSACQLGKAKQLPFPESSRQSSV-PLALI 520



 Score = 32.7 bits (73), Expect(3) = 6e-53
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -1

Query: 936 LLTCHSDVWMSPVVSVSGFRYYV 868
           L   HSDVW+SPV S  G  YYV
Sbjct: 517 LALIHSDVWVSPVQSTGGCSYYV 539


>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
          Length = 1453

 Score =  202 bits (513), Expect(3) = 1e-51
 Identities = 109/286 (38%), Positives = 158/286 (55%), Gaps = 11/286 (3%)
 Frame = -3

Query: 862  IDDYTRYTWIFPMKHKHEVLTHFQTFHNCVQNIFNTRVKYFQSVGGGEYVNNPFGTYCRQ 683
            IDDY+R+TW++P+K K +    F  F   V+N ++T++K FQS GG E+ +N F ++ +Q
Sbjct: 495  IDDYSRFTWLYPLKLKSDFFDIFLQFQKLVENQYSTKIKIFQSDGGAEFTSNRFQSHLQQ 554

Query: 682  MGIHHRLSCPHTPEQNGLAERKHRHIADMAHTLLATAHVPLNLWVEAVSTAVFLINRLPS 503
             GIHH++SCP+TP QNG AERKHRH+ +    LL  +HVP   WV+A STA ++INRLP 
Sbjct: 555  FGIHHQMSCPYTPSQNGRAERKHRHVTETGLALLFHSHVPPRYWVDAFSTATYIINRLPL 614

Query: 502  PLLQWTNPYARLFGHSPSYSD-XXXXXXXXXXXXXXXXXXRSHHELLSVFLGYGAQHKGY 326
            P+L   +P+  LFG SP+Y +                    S   L  +FLGY + HKG+
Sbjct: 615  PVLGGLSPFEVLFGKSPNYENFHPFGCRVYPCLRDYAPHKFSPRSLPCIFLGYSSSHKGF 674

Query: 325  RCLDLATNRLYISRHVRFEETSFPFAQXXXXXXXXXSTEYVELDLTPIVTP-TVQPFVSP 149
            RC D  T+R YI+RH RF+E  FPF+          +T   ++ L+    P  ++P  S 
Sbjct: 675  RCFDTTTSRTYITRHARFDEHFFPFSN------TSSATSIADIGLSNFFEPCALEPSPST 728

Query: 148  VASTPSVLPDQSLLH-------AAPLIIYQR--RNVPSTQAVSPSP 38
             + T + +P     H         PL +      +  S+ AVSP P
Sbjct: 729  SSPTTTRVPPSPSCHFCADDFAVEPLQVSSSAPESTSSSAAVSPVP 774



 Score = 26.2 bits (56), Expect(3) = 1e-51
 Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -1

Query: 924 HSDVW-MSPVVSVSGFRYYV 868
           H D+W ++PV S  GF YYV
Sbjct: 473 HCDIWGLAPVKSNLGFNYYV 492



 Score = 23.5 bits (49), Expect(3) = 1e-51
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 1016 SFCKGCALGKSTHLPFKNS 960
            S C  C L KS  LPF ++
Sbjct: 443  SLCSTCQLAKSHRLPFSSN 461


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
            Arabidopsis thaliana BAC gb|AF080119 and is a member of
            the reverse transcriptase family PF|00078 [Arabidopsis
            thaliana]
          Length = 1415

 Score =  196 bits (498), Expect(3) = 7e-50
 Identities = 93/207 (44%), Positives = 130/207 (62%), Gaps = 1/207 (0%)
 Frame = -3

Query: 862  IDDYTRYTWIFPMKHKHEVLTHFQTFHNCVQNIFNTRVKYFQSVGGGEYVNNPFGTYCRQ 683
            +DDY+RY+W +P+ +K E L+ F +F   V+N  NT++K FQS GGGE+V+N   T+  +
Sbjct: 538  VDDYSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSE 597

Query: 682  MGIHHRLSCPHTPEQNGLAERKHRHIADMAHTLLATAHVPLNLWVEAVSTAVFLINRLPS 503
             GIHHR+SCP+TP+QNGLAERKHRH+ ++  ++L  +H P   WVE+  TA ++INRLPS
Sbjct: 598  HGIHHRISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPS 657

Query: 502  PLLQWTNPYARLFGHSPSYSD-XXXXXXXXXXXXXXXXXXRSHHELLSVFLGYGAQHKGY 326
             +L+  +PY  LFG  P YS                         L  VFLGY +Q+KGY
Sbjct: 658  SVLKNLSPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGY 717

Query: 325  RCLDLATNRLYISRHVRFEETSFPFAQ 245
            RC    T ++YISR+V F E+  PF +
Sbjct: 718  RCFYPPTGKVYISRNVIFNESELPFKE 744



 Score = 25.0 bits (53), Expect(3) = 7e-50
 Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = -1

Query: 924 HSDVW-MSPVVSVSGFRYY 871
           H D+W  SPVVS  G +YY
Sbjct: 516 HCDLWGPSPVVSNQGLKYY 534



 Score = 24.3 bits (51), Expect(3) = 7e-50
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 1010 CKGCALGKSTHLPF 969
            C+ C +GKS+ LPF
Sbjct: 488  CEPCQMGKSSRLPF 501


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score =  189 bits (481), Expect(2) = 3e-48
 Identities = 93/207 (44%), Positives = 123/207 (59%), Gaps = 1/207 (0%)
 Frame = -3

Query: 862  IDDYTRYTWIFPMKHKHEVLTHFQTFHNCVQNIFNTRVKYFQSVGGGEYVNNPFGTYCRQ 683
            +DDY+RY+W +P+K K +    F  F N V+N FNT++K FQS GGGE+ +N    +   
Sbjct: 541  VDDYSRYSWFYPLKAKSDFFAVFVAFQNLVENQFNTKIKVFQSDGGGEFTSNLMKKHLTD 600

Query: 682  MGIHHRLSCPHTPEQNGLAERKHRHIADMAHTLLATAHVPLNLWVEAVSTAVFLINRLPS 503
             GI HR+SCP+TP+QNG+AERKHRH  ++  +++  +H PL  WVEA  TA FL N LPS
Sbjct: 601  CGIQHRISCPYTPQQNGIAERKHRHFVELGLSMMFHSHTPLQFWVEAFFTASFLSNMLPS 660

Query: 502  PLLQWTNPYARLFGHSPSYSD-XXXXXXXXXXXXXXXXXXRSHHELLSVFLGYGAQHKGY 326
            P L   +P   L    P+Y+                         L  VFLGY +Q+KGY
Sbjct: 661  PSLGNVSPLEALLKQKPNYAMLRVFGTACYPCLRPLGEHKFEPRSLQCVFLGYNSQYKGY 720

Query: 325  RCLDLATNRLYISRHVRFEETSFPFAQ 245
            RCL   T R+YISRHV F+E +FPF Q
Sbjct: 721  RCLYPPTGRVYISRHVIFDEETFPFKQ 747



 Score = 29.6 bits (65), Expect(2) = 3e-48
 Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -1

Query: 954 NKCHLSLL-TCHSDVW-MSPVVSVSGFRYYV 868
           N   L LL   H D+W  SPVVS  GF+YYV
Sbjct: 508 NSRELDLLGRIHCDLWGPSPVVSKQGFKYYV 538


>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
          Length = 1501

 Score =  192 bits (489), Expect = 9e-47
 Identities = 92/204 (45%), Positives = 124/204 (60%), Gaps = 1/204 (0%)
 Frame = -3

Query: 862  IDDYTRYTWIFPMKHKHEVLTHFQTFHNCVQNIFNTRVKYFQSVGGGEYVNNPFGTYCRQ 683
            IDDY+R+TW++P+K K +    F  F   V+N  + R+K FQS GG E+ N  F  + R 
Sbjct: 491  IDDYSRFTWLYPLKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGGAEFTNTCFKAHLRT 550

Query: 682  MGIHHRLSCPHTPEQNGLAERKHRHIADMAHTLLATAHVPLNLWVEAVSTAVFLINRLPS 503
             GIHH+LSCP+TP QNG AERKHRH+ +    LL  +H+    WV+A STA ++INRLP+
Sbjct: 551  SGIHHQLSCPYTPAQNGRAERKHRHVTETGLALLFHSHLSPRFWVDAFSTATYIINRLPT 610

Query: 502  PLLQWTNPYARLFGHSPSYSD-XXXXXXXXXXXXXXXXXXRSHHELLSVFLGYGAQHKGY 326
            PLL   +P+  L+G SP Y +                    S   +  +FLGY   HKG+
Sbjct: 611  PLLGGKSPFELLYGXSPHYENFHPFGCRVYPCLRDYMPNKLSPRSIPCIFLGYSPSHKGF 670

Query: 325  RCLDLATNRLYISRHVRFEETSFP 254
            RCLD  T+RLYI+RH +F+ET FP
Sbjct: 671  RCLDPTTSRLYITRHAQFDETHFP 694