BLASTX nr result

ID: Coptis24_contig00016412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016412
         (1607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265233.1| PREDICTED: uncharacterized protein LOC100256...   357   4e-96
ref|XP_002532211.1| conserved hypothetical protein [Ricinus comm...   347   7e-93
ref|XP_003542189.1| PREDICTED: uncharacterized protein LOC100802...   335   2e-89
ref|XP_003556896.1| PREDICTED: uncharacterized protein LOC100804...   335   3e-89
gb|AFK43448.1| unknown [Lotus japonicus]                              323   1e-85

>ref|XP_002265233.1| PREDICTED: uncharacterized protein LOC100256200 [Vitis vinifera]
            gi|296085052|emb|CBI28467.3| unnamed protein product
            [Vitis vinifera]
          Length = 327

 Score =  357 bits (917), Expect = 4e-96
 Identities = 193/332 (58%), Positives = 225/332 (67%), Gaps = 6/332 (1%)
 Frame = +3

Query: 342  MFPSSSLISGNFSS-PKFSIRVPCEPLPKPNKVTSFIKVSLKLCNGLSVSTCALSTKWKI 518
            M  +++LIS NFS+ P  S++        PN   SFI+        LS     +ST  K 
Sbjct: 1    MLATTTLISCNFSALPFLSLKTR-----NPNSRISFIRTPNPPI--LSKPKHPISTFQKR 53

Query: 519  NGVLQICHNSLNTENPKETLPED----ENNSNKLGTERDWTTSILLFALWTGLMYYVFVL 686
             G LQIC +S NT+NP++   E     E+ +   G   DWTTS LLF LW GL+YYVF L
Sbjct: 54   GG-LQICQSSFNTQNPEDPAAEKGAKLESENGDGGDGGDWTTSALLFVLWVGLIYYVFNL 112

Query: 687  TPNQTPSRDMYFLEKLLNLKGDDGFEMNKVLVSLWYIMGLWPISYSMLLLPSGRSSKDGV 866
            TP+QTPSRD+YFL+KLLNLKGDDGF MN VLVSLWYIMGLWP+ YSMLLLP+GRSSK  V
Sbjct: 113  TPDQTPSRDVYFLKKLLNLKGDDGFRMNDVLVSLWYIMGLWPLVYSMLLLPTGRSSKGKV 172

Query: 867  RVWPFLVLSCFGGAYALLPYFVLWKXXXXXXXXXXXGRWPLNFLESKXXXXXXXXXXXXX 1046
             VWPFL  S FGG YALLPYFVLW+            RWPLNFLESK             
Sbjct: 173  PVWPFLTFSFFGGVYALLPYFVLWRPPPPPVEETELRRWPLNFLESKITAGISLAAGLGI 232

Query: 1047 XXXXXXXNADVWTEFYQYCRESKFIHVTFLDFTLLSTFAPFWVYNDMTARKWTNKGSWIL 1226
                   + D W EFYQY RESKFIH+T LDFTLLS FAPFWVYNDMTARKW +KGSW+L
Sbjct: 233  IIYAGLASGDDWKEFYQYYRESKFIHITSLDFTLLSAFAPFWVYNDMTARKWYDKGSWLL 292

Query: 1227 PLTVIPFLGPALYLLLRPPLSAVPVS-SPTTT 1319
            PL+++PFLGPALYLLLRP LSA+PVS SP+++
Sbjct: 293  PLSLVPFLGPALYLLLRPSLSAMPVSLSPSSS 324


>ref|XP_002532211.1| conserved hypothetical protein [Ricinus communis]
            gi|223528107|gb|EEF30180.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 331

 Score =  347 bits (889), Expect = 7e-93
 Identities = 178/330 (53%), Positives = 222/330 (67%), Gaps = 5/330 (1%)
 Frame = +3

Query: 342  MFPSSSLISGNFSSPKFSIRVPCEPLPKPNKVTSFIKVSLKLCNGLSVSTCALSTK---W 512
            M   S+LIS NF S     + P       +     +K      +   + + + +T    +
Sbjct: 1    MLAHSNLISCNFPSLPLLCKNPRPATTTASLQAQILKHKTTYASSNFLKSNSYNTSIFPY 60

Query: 513  KINGVLQICHNSLNT-ENPKETLPEDENNSNKLGTERDWTTSILLFALWTGLMYYVFVLT 689
            K   VLQ+C++ L++ ++ K+ + E + N+ K G  RDWT+SILLF  W  L+YYVF L 
Sbjct: 61   KKRCVLQVCNSVLDSKDSDKDPILESDTNNVKEG--RDWTSSILLFVFWGALLYYVFNLA 118

Query: 690  PNQTPSRDMYFLEKLLNLKGDDGFEMNKVLVSLWYIMGLWPISYSMLLLPSGRSSKDGVR 869
            P+QTP+ DMYFL+KLLNLKGDDGFEMN+VLVSLWY+MGLWP+ YSMLLLP+GRSSK  + 
Sbjct: 119  PDQTPTTDMYFLKKLLNLKGDDGFEMNEVLVSLWYVMGLWPLVYSMLLLPTGRSSKSKIP 178

Query: 870  VWPFLVLSCFGGAYALLPYFVLWKXXXXXXXXXXXGRWPLNFLESKXXXXXXXXXXXXXX 1049
            VWPFLVLSCFGGAYALLPYFVLW+           G+WPLNFLESK              
Sbjct: 179  VWPFLVLSCFGGAYALLPYFVLWRPPPPPVEESELGKWPLNFLESKLTAGISLAAGLGLF 238

Query: 1050 XXXXXXNADVWTEFYQYCRESKFIHVTFLDFTLLSTFAPFWVYNDMTARKWTNKGSWILP 1229
                  N DVW EFYQY + SKFIH+  LDF LLS FAPFWVYNDMTARKW + GSW+LP
Sbjct: 239  LYAGLANGDVWKEFYQYVQGSKFIHIMSLDFALLSAFAPFWVYNDMTARKWYDTGSWLLP 298

Query: 1230 LTVIPFLGPALYLLLRPPLSAVPVS-SPTT 1316
            ++++PFLGPALYL+LRP LS +PVS SPT+
Sbjct: 299  ISLVPFLGPALYLVLRPSLSEMPVSVSPTS 328


>ref|XP_003542189.1| PREDICTED: uncharacterized protein LOC100802797 [Glycine max]
          Length = 331

 Score =  335 bits (859), Expect = 2e-89
 Identities = 164/264 (62%), Positives = 183/264 (69%)
 Frame = +3

Query: 513  KINGVLQICHNSLNTENPKETLPEDENNSNKLGTERDWTTSILLFALWTGLMYYVFVLTP 692
            K  G   ICH+          L E+          RDWTTSILLF LW  LMYYVF LTP
Sbjct: 71   KRKGCAHICHS----------LKEESEVGGNGNNGRDWTTSILLFLLWAALMYYVFFLTP 120

Query: 693  NQTPSRDMYFLEKLLNLKGDDGFEMNKVLVSLWYIMGLWPISYSMLLLPSGRSSKDGVRV 872
            NQTPSRD YFL+KLLNLKGDDGF MN+VLVSLWY+MGLWP+ YSMLLLP+GRSSK+ + V
Sbjct: 121  NQTPSRDTYFLKKLLNLKGDDGFRMNEVLVSLWYLMGLWPLVYSMLLLPTGRSSKNNIPV 180

Query: 873  WPFLVLSCFGGAYALLPYFVLWKXXXXXXXXXXXGRWPLNFLESKXXXXXXXXXXXXXXX 1052
            WPFL+LSCFGGAY LLPYFVLWK             WPLNFLESK               
Sbjct: 181  WPFLILSCFGGAYVLLPYFVLWKPPAPPVEETQLKTWPLNFLESKVTAMISLAAGVAIIT 240

Query: 1053 XXXXXNADVWTEFYQYCRESKFIHVTFLDFTLLSTFAPFWVYNDMTARKWTNKGSWILPL 1232
                   DVW EFYQY RESKFIH+T +DF +LSTFAPFWVYNDMTARK  +KGSW+LP+
Sbjct: 241  YAGLAGQDVWKEFYQYFRESKFIHITSIDFIILSTFAPFWVYNDMTARKRFDKGSWLLPI 300

Query: 1233 TVIPFLGPALYLLLRPPLSAVPVS 1304
            ++IPFLGP LYLLLRP LS V +S
Sbjct: 301  SLIPFLGPGLYLLLRPSLSTVAIS 324


>ref|XP_003556896.1| PREDICTED: uncharacterized protein LOC100804721 [Glycine max]
          Length = 333

 Score =  335 bits (858), Expect = 3e-89
 Identities = 169/264 (64%), Positives = 188/264 (71%)
 Frame = +3

Query: 513  KINGVLQICHNSLNTENPKETLPEDENNSNKLGTERDWTTSILLFALWTGLMYYVFVLTP 692
            K  G + ICH SL  E+      E   NSN     RDWTTSILLF LW  LMYYVF LTP
Sbjct: 73   KKKGGVHICH-SLKEES------EVGGNSNN---PRDWTTSILLFLLWAALMYYVFFLTP 122

Query: 693  NQTPSRDMYFLEKLLNLKGDDGFEMNKVLVSLWYIMGLWPISYSMLLLPSGRSSKDGVRV 872
            NQTPSRD YFL+KLLNLKGDDGF MN+VLVSLWY+MGLWP+ YSMLLLP+GRSSK+ + V
Sbjct: 123  NQTPSRDTYFLKKLLNLKGDDGFRMNEVLVSLWYLMGLWPLVYSMLLLPTGRSSKNIIPV 182

Query: 873  WPFLVLSCFGGAYALLPYFVLWKXXXXXXXXXXXGRWPLNFLESKXXXXXXXXXXXXXXX 1052
            WPFL+LSCFGGAYAL PYFVLWK             WPLNFLESK               
Sbjct: 183  WPFLILSCFGGAYALFPYFVLWKPPAPPVEETQLKTWPLNFLESKVTATISLAAGVAIIT 242

Query: 1053 XXXXXNADVWTEFYQYCRESKFIHVTFLDFTLLSTFAPFWVYNDMTARKWTNKGSWILPL 1232
                   DVW EFYQY RESKFIH+  +DF +LSTFAPFWVYNDMTARK ++KGSW+LPL
Sbjct: 243  YAGLAGQDVWKEFYQYFRESKFIHIMSIDFIILSTFAPFWVYNDMTARKRSDKGSWLLPL 302

Query: 1233 TVIPFLGPALYLLLRPPLSAVPVS 1304
            ++IPFLGP LYLLLRP LS V +S
Sbjct: 303  SLIPFLGPGLYLLLRPSLSTVAIS 326


>gb|AFK43448.1| unknown [Lotus japonicus]
          Length = 324

 Score =  323 bits (827), Expect = 1e-85
 Identities = 169/308 (54%), Positives = 200/308 (64%)
 Frame = +3

Query: 381  SPKFSIRVPCEPLPKPNKVTSFIKVSLKLCNGLSVSTCALSTKWKINGVLQICHNSLNTE 560
            +PK +      P+P P+      KV L   +  + S        K+ G+L +CH S    
Sbjct: 26   NPKLTRVSLSPPIPSPSPSRCCFKVPL---HAKTNSNAPFPASRKM-GLLHVCHTS---- 77

Query: 561  NPKETLPEDENNSNKLGTERDWTTSILLFALWTGLMYYVFVLTPNQTPSRDMYFLEKLLN 740
              KET  E           RDWTTSILLF LW  LMYYVF L+P+QTP+RD+YFL+KLLN
Sbjct: 78   -KKETDIETTQG-------RDWTTSILLFFLWAALMYYVFFLSPDQTPTRDLYFLKKLLN 129

Query: 741  LKGDDGFEMNKVLVSLWYIMGLWPISYSMLLLPSGRSSKDGVRVWPFLVLSCFGGAYALL 920
            LKGDDGF MN+VLVS+WYIMGL P++YSMLLLP+GRSS+  + VWPFL+LSCFGG YALL
Sbjct: 130  LKGDDGFRMNEVLVSMWYIMGLRPLAYSMLLLPTGRSSESKIPVWPFLILSCFGGVYALL 189

Query: 921  PYFVLWKXXXXXXXXXXXGRWPLNFLESKXXXXXXXXXXXXXXXXXXXXNADVWTEFYQY 1100
            PYFVLWK             WPLNFLESK                      DVW EFYQY
Sbjct: 190  PYFVLWKPPAPPVEETQLKTWPLNFLESKVTAVISLAAGIGLITYAGLSGDDVWKEFYQY 249

Query: 1101 CRESKFIHVTFLDFTLLSTFAPFWVYNDMTARKWTNKGSWILPLTVIPFLGPALYLLLRP 1280
             RESKFIH+  +DFTLLST APFWVYNDMT RKW +KGS +LP+++IPFLGP LYLLLRP
Sbjct: 250  FRESKFIHIMTIDFTLLSTLAPFWVYNDMTTRKWFDKGSRLLPVSLIPFLGPGLYLLLRP 309

Query: 1281 PLSAVPVS 1304
             LS + +S
Sbjct: 310  SLSTMAIS 317


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