BLASTX nr result
ID: Coptis24_contig00016397
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016397 (556 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAB65156.1| basic cellulase [Citrus sinensis] 172 2e-41 ref|XP_002329161.1| predicted protein [Populus trichocarpa] gi|2... 172 3e-41 gb|AAT75042.1| Cel9B [Populus tremula x Populus tremuloides] 172 3e-41 ref|XP_003522825.1| PREDICTED: endoglucanase 9-like [Glycine max] 167 1e-39 ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabido... 167 1e-39 >gb|AAB65156.1| basic cellulase [Citrus sinensis] Length = 488 Score = 172 bits (437), Expect = 2e-41 Identities = 78/88 (88%), Positives = 82/88 (93%) Frame = -3 Query: 266 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKCA 87 VDL GGYYDAGDN+KFNFPMAFTTTMLSWSTLEYG +MG +L +AR AIRWATDYLLKCA Sbjct: 69 VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCA 128 Query: 86 TATPGKLYVGVGDPNADHKCWERSEDMD 3 TATPGKLYVGVGDPNADHKCWER EDMD Sbjct: 129 TATPGKLYVGVGDPNADHKCWERPEDMD 156 >ref|XP_002329161.1| predicted protein [Populus trichocarpa] gi|222870942|gb|EEF08073.1| predicted protein [Populus trichocarpa] gi|347466581|gb|AEO97203.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466635|gb|AEO97230.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|429326594|gb|AFZ78637.1| korrigan [Populus tomentosa] Length = 481 Score = 172 bits (436), Expect = 3e-41 Identities = 78/88 (88%), Positives = 81/88 (92%) Frame = -3 Query: 266 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKCA 87 VDL GGYYDAGDN+KFNFPMAFTTTMLSWSTLEYG RMG +L +AR AIRWATDYLLKCA Sbjct: 68 VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKRMGPELPNARAAIRWATDYLLKCA 127 Query: 86 TATPGKLYVGVGDPNADHKCWERSEDMD 3 TATPGKLYVGVGDPN DHKCWER EDMD Sbjct: 128 TATPGKLYVGVGDPNVDHKCWERPEDMD 155 >gb|AAT75042.1| Cel9B [Populus tremula x Populus tremuloides] Length = 486 Score = 172 bits (436), Expect = 3e-41 Identities = 78/88 (88%), Positives = 81/88 (92%) Frame = -3 Query: 266 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKCA 87 VDL GGYYDAGDN+KFNFPMAFTTTMLSWSTLEYG RMG +L +AR AIRWATDYLLKCA Sbjct: 68 VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKRMGPELPNARAAIRWATDYLLKCA 127 Query: 86 TATPGKLYVGVGDPNADHKCWERSEDMD 3 TATPGKLYVGVGDPN DHKCWER EDMD Sbjct: 128 TATPGKLYVGVGDPNVDHKCWERPEDMD 155 >ref|XP_003522825.1| PREDICTED: endoglucanase 9-like [Glycine max] Length = 484 Score = 167 bits (422), Expect = 1e-39 Identities = 73/88 (82%), Positives = 80/88 (90%) Frame = -3 Query: 266 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKCA 87 VDL GGYYDAGDN+KFNFPMA+TTTMLSW+T+EYG RMG Q+ AR AIRWATDYLLKCA Sbjct: 67 VDLSGGYYDAGDNVKFNFPMAYTTTMLSWATIEYGKRMGPQIKEARAAIRWATDYLLKCA 126 Query: 86 TATPGKLYVGVGDPNADHKCWERSEDMD 3 T+TPG+LYVGVGDPN DHKCWER EDMD Sbjct: 127 TSTPGRLYVGVGDPNVDHKCWERPEDMD 154 >ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp. lyrata] gi|297336382|gb|EFH66799.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp. lyrata] Length = 485 Score = 167 bits (422), Expect = 1e-39 Identities = 75/88 (85%), Positives = 81/88 (92%) Frame = -3 Query: 266 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKCA 87 VDL GGYYDAGDN+KFNFPMAFTTTMLSWS+LEYG +MGS+L ++R AIRWATDYLLKCA Sbjct: 67 VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSSLEYGKKMGSELQNSRVAIRWATDYLLKCA 126 Query: 86 TATPGKLYVGVGDPNADHKCWERSEDMD 3 ATPGKLYVGVGDPN DHKCWER EDMD Sbjct: 127 RATPGKLYVGVGDPNGDHKCWERPEDMD 154