BLASTX nr result

ID: Coptis24_contig00016397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016397
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB65156.1| basic cellulase [Citrus sinensis]                      172   2e-41
ref|XP_002329161.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
gb|AAT75042.1| Cel9B [Populus tremula x Populus tremuloides]          172   3e-41
ref|XP_003522825.1| PREDICTED: endoglucanase 9-like [Glycine max]     167   1e-39
ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabido...   167   1e-39

>gb|AAB65156.1| basic cellulase [Citrus sinensis]
          Length = 488

 Score =  172 bits (437), Expect = 2e-41
 Identities = 78/88 (88%), Positives = 82/88 (93%)
 Frame = -3

Query: 266 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKCA 87
           VDL GGYYDAGDN+KFNFPMAFTTTMLSWSTLEYG +MG +L +AR AIRWATDYLLKCA
Sbjct: 69  VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCA 128

Query: 86  TATPGKLYVGVGDPNADHKCWERSEDMD 3
           TATPGKLYVGVGDPNADHKCWER EDMD
Sbjct: 129 TATPGKLYVGVGDPNADHKCWERPEDMD 156


>ref|XP_002329161.1| predicted protein [Populus trichocarpa] gi|222870942|gb|EEF08073.1|
           predicted protein [Populus trichocarpa]
           gi|347466581|gb|AEO97203.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466635|gb|AEO97230.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|429326594|gb|AFZ78637.1| korrigan [Populus tomentosa]
          Length = 481

 Score =  172 bits (436), Expect = 3e-41
 Identities = 78/88 (88%), Positives = 81/88 (92%)
 Frame = -3

Query: 266 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKCA 87
           VDL GGYYDAGDN+KFNFPMAFTTTMLSWSTLEYG RMG +L +AR AIRWATDYLLKCA
Sbjct: 68  VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKRMGPELPNARAAIRWATDYLLKCA 127

Query: 86  TATPGKLYVGVGDPNADHKCWERSEDMD 3
           TATPGKLYVGVGDPN DHKCWER EDMD
Sbjct: 128 TATPGKLYVGVGDPNVDHKCWERPEDMD 155


>gb|AAT75042.1| Cel9B [Populus tremula x Populus tremuloides]
          Length = 486

 Score =  172 bits (436), Expect = 3e-41
 Identities = 78/88 (88%), Positives = 81/88 (92%)
 Frame = -3

Query: 266 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKCA 87
           VDL GGYYDAGDN+KFNFPMAFTTTMLSWSTLEYG RMG +L +AR AIRWATDYLLKCA
Sbjct: 68  VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKRMGPELPNARAAIRWATDYLLKCA 127

Query: 86  TATPGKLYVGVGDPNADHKCWERSEDMD 3
           TATPGKLYVGVGDPN DHKCWER EDMD
Sbjct: 128 TATPGKLYVGVGDPNVDHKCWERPEDMD 155


>ref|XP_003522825.1| PREDICTED: endoglucanase 9-like [Glycine max]
          Length = 484

 Score =  167 bits (422), Expect = 1e-39
 Identities = 73/88 (82%), Positives = 80/88 (90%)
 Frame = -3

Query: 266 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKCA 87
           VDL GGYYDAGDN+KFNFPMA+TTTMLSW+T+EYG RMG Q+  AR AIRWATDYLLKCA
Sbjct: 67  VDLSGGYYDAGDNVKFNFPMAYTTTMLSWATIEYGKRMGPQIKEARAAIRWATDYLLKCA 126

Query: 86  TATPGKLYVGVGDPNADHKCWERSEDMD 3
           T+TPG+LYVGVGDPN DHKCWER EDMD
Sbjct: 127 TSTPGRLYVGVGDPNVDHKCWERPEDMD 154


>ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336382|gb|EFH66799.1| glycosyl hydrolase
           family 9 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  167 bits (422), Expect = 1e-39
 Identities = 75/88 (85%), Positives = 81/88 (92%)
 Frame = -3

Query: 266 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKCA 87
           VDL GGYYDAGDN+KFNFPMAFTTTMLSWS+LEYG +MGS+L ++R AIRWATDYLLKCA
Sbjct: 67  VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSSLEYGKKMGSELQNSRVAIRWATDYLLKCA 126

Query: 86  TATPGKLYVGVGDPNADHKCWERSEDMD 3
            ATPGKLYVGVGDPN DHKCWER EDMD
Sbjct: 127 RATPGKLYVGVGDPNGDHKCWERPEDMD 154


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