BLASTX nr result

ID: Coptis24_contig00016388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016388
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29678.3| unnamed protein product [Vitis vinifera]               61   2e-07
ref|XP_003608258.1| Disease resistance protein [Medicago truncat...    58   1e-06
gb|EEC84228.1| hypothetical protein OsI_30648 [Oryza sativa Indi...    57   2e-06
emb|CBI29677.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_003608264.1| Disease resistance protein RPS5 [Medicago tr...    56   5e-06

>emb|CBI29678.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/94 (37%), Positives = 50/94 (53%)
 Frame = -2

Query: 635  ESGDVEKDKASHPHMKDFSLFHLPELSSFSGSDSLVVDWPSAKSLQVNECPNLKRLPLGT 456
            ES ++  +  S P +K   L  LP+L S   SDSL  +WPS +S++++ C  LKRLP   
Sbjct: 872  ESENIGLESCSLPRLKTLVLLDLPKLKSIWVSDSL--EWPSLQSIKISMCDMLKRLPFNI 929

Query: 455  HSVPKLENFAISDQEWFDKLEWYDQRIQAKLQTL 354
             +  KL       Q W+  L W D  I+ +LQ L
Sbjct: 930  ANAAKL-RLIEGQQSWWGALVWEDDAIKQRLQPL 962


>ref|XP_003608258.1| Disease resistance protein [Medicago truncatula]
            gi|355509313|gb|AES90455.1| Disease resistance protein
            [Medicago truncatula]
          Length = 896

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
 Frame = -2

Query: 635  ESGDVEKDKASHPHMKDFSLFHLPELSSFSGSDSLVVDWPSAKSLQVNECPNLKRLPLGT 456
            E+ D E+      ++K   LF++P+L S        +D+PS K  +V +CPNL++LPL +
Sbjct: 802  EAKDDEQADNIFTNLKILGLFYMPKLVSIH---KRALDFPSLKRFEVAKCPNLRKLPLNS 858

Query: 455  HSVPKLENFAI-SDQEWFDKLEWYDQRIQAKLQTLLE 348
                K    AI  + EW+DKLEW D  I   L+  L+
Sbjct: 859  SFALKNNLIAIKGETEWWDKLEWDDTIIPTLLRPKLQ 895


>gb|EEC84228.1| hypothetical protein OsI_30648 [Oryza sativa Indica Group]
          Length = 889

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
 Frame = -2

Query: 581  SLFHLPELSS--FSGSDSLV------VDWPSAKSLQVNECPNLKRLPLGTHSV-PKLENF 429
            S+   P L S  F+ +D LV      V +PS KSL+V  C NLKRLP    S+ PKL+  
Sbjct: 800  SIDTFPRLVSMLFANNDGLVSICDSDVTFPSLKSLRVTNCENLKRLPFRQQSLPPKLQVI 859

Query: 428  AISDQEWFDKLEWYDQRIQAKLQTLLEM 345
                 EW+D LEW ++ I+  L+ LL++
Sbjct: 860  YSDSVEWWDNLEWEEEGIRPMLEPLLKI 887


>emb|CBI29677.3| unnamed protein product [Vitis vinifera]
          Length = 979

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = -2

Query: 599  PHMKDFSLFHLPELSSFSGSDSLVVDWPSAKSLQVNECPNLKRLPLGTHSVPKLENFAIS 420
            P +K  +L +L  L+S  G D L  +W S + +++++CP LKRLP    +  KL +    
Sbjct: 896  PRLKTLTLLNLKTLTSIWGGDPL--EWRSLQVIEISKCPKLKRLPFNNDNATKLRSIK-G 952

Query: 419  DQEWFDKLEWYDQ-RIQAKLQTL 354
             +EW++ LEW D   I+ +L++L
Sbjct: 953  QREWWEALEWKDDAAIEQRLESL 975


>ref|XP_003608264.1| Disease resistance protein RPS5 [Medicago truncatula]
           gi|87240477|gb|ABD32335.1| Disease resistance protein;
           Heat shock protein DnaJ, N-terminal; AAA ATPase
           [Medicago truncatula] gi|355509319|gb|AES90461.1|
           Disease resistance protein RPS5 [Medicago truncatula]
          Length = 806

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
 Frame = -2

Query: 635 ESGDVEKDKASHPHMKDFSLFHLPELSSFSGSDSLVVDWPSAKSLQVNECPNLKRLPLGT 456
           ++G   K+     ++ D  L+ +P+L S        +D+PS K ++V +CPNL++LP  +
Sbjct: 703 QAGSDSKNDMIFANLTDLCLYGMPKLVSIH---KRALDFPSLKRIKVTDCPNLRKLPFNS 759

Query: 455 HSVPKLENFAI-SDQEWFDKLEWYDQRIQAKLQTLL 351
               K+   AI  + EW+D LEW D  I   L+  L
Sbjct: 760 RFAFKINLIAIQGETEWWDNLEWDDTIIPTLLRPKL 795


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