BLASTX nr result

ID: Coptis24_contig00016387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016387
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608258.1| Disease resistance protein [Medicago truncat...    62   6e-08
ref|XP_003608264.1| Disease resistance protein RPS5 [Medicago tr...    59   5e-07
emb|CAN75117.1| hypothetical protein VITISV_002420 [Vitis vinifera]    57   2e-06
ref|XP_002278676.2| PREDICTED: probable disease resistance prote...    55   5e-06
gb|EEC84228.1| hypothetical protein OsI_30648 [Oryza sativa Indi...    55   8e-06

>ref|XP_003608258.1| Disease resistance protein [Medicago truncatula]
            gi|355509313|gb|AES90455.1| Disease resistance protein
            [Medicago truncatula]
          Length = 896

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = -3

Query: 303  KDFSLFHLPELSSFSERDSLVVDWPSTKSLQVIECPNLKRLPLGTHSVPKLEKFAIP-DQ 127
            K   LF++P+L S  +R    +D+PS K  +V +CPNL++LPL +    K    AI  + 
Sbjct: 817  KILGLFYMPKLVSIHKR---ALDFPSLKRFEVAKCPNLRKLPLNSSFALKNNLIAIKGET 873

Query: 126  EWFNKLEWDDQRIKAELQTRLE 61
            EW++KLEWDD  I   L+ +L+
Sbjct: 874  EWWDKLEWDDTIIPTLLRPKLQ 895


>ref|XP_003608264.1| Disease resistance protein RPS5 [Medicago truncatula]
           gi|87240477|gb|ABD32335.1| Disease resistance protein;
           Heat shock protein DnaJ, N-terminal; AAA ATPase
           [Medicago truncatula] gi|355509319|gb|AES90461.1|
           Disease resistance protein RPS5 [Medicago truncatula]
          Length = 806

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
 Frame = -3

Query: 300 DFSLFHLPELSSFSERDSLVVDWPSTKSLQVIECPNLKRLPLGTHSVPKLEKFAIP-DQE 124
           D  L+ +P+L S  +R    +D+PS K ++V +CPNL++LP  +    K+   AI  + E
Sbjct: 719 DLCLYGMPKLVSIHKR---ALDFPSLKRIKVTDCPNLRKLPFNSRFAFKINLIAIQGETE 775

Query: 123 WFNKLEWDDQRIKAELQTRL 64
           W++ LEWDD  I   L+ +L
Sbjct: 776 WWDNLEWDDTIIPTLLRPKL 795


>emb|CAN75117.1| hypothetical protein VITISV_002420 [Vitis vinifera]
          Length = 1377

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/69 (36%), Positives = 42/69 (60%)
 Frame = -3

Query: 291  LFHLPELSSFSERDSLVVDWPSTKSLQVIECPNLKRLPLGTHSVPKLEKFAIPDQEWFNK 112
            L +LP L S  +R    + +PS K ++V+ CPNL++LPL ++S     K  + +  W+ +
Sbjct: 810  LDYLPNLKSIYKRP---LPFPSLKEIRVLHCPNLRKLPLNSNSATNTLKAIVGESSWWEE 866

Query: 111  LEWDDQRIK 85
            LEW+D  +K
Sbjct: 867  LEWEDDNLK 875


>ref|XP_002278676.2| PREDICTED: probable disease resistance protein At5g63020-like [Vitis
            vinifera]
          Length = 895

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/70 (38%), Positives = 43/70 (61%)
 Frame = -3

Query: 294  SLFHLPELSSFSERDSLVVDWPSTKSLQVIECPNLKRLPLGTHSVPKLEKFAIPDQEWFN 115
            +L +LP L S S R    + +PS K+L+V +CPNL++LPL ++S     K      EW+ 
Sbjct: 803  TLHYLPNLRSISRR---ALPFPSLKTLRVTKCPNLRKLPLDSNSARNSLKIIEGTSEWWR 859

Query: 114  KLEWDDQRIK 85
             L+W+D+ I+
Sbjct: 860  GLQWEDETIQ 869


>gb|EEC84228.1| hypothetical protein OsI_30648 [Oryza sativa Indica Group]
          Length = 889

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
 Frame = -3

Query: 294  SLFHLPELSS--FSERDSLV------VDWPSTKSLQVIECPNLKRLPLGTHSV-PKLEKF 142
            S+   P L S  F+  D LV      V +PS KSL+V  C NLKRLP    S+ PKL+  
Sbjct: 800  SIDTFPRLVSMLFANNDGLVSICDSDVTFPSLKSLRVTNCENLKRLPFRQQSLPPKLQVI 859

Query: 141  AIPDQEWFNKLEWDDQRIKAELQTRLEV 58
                 EW++ LEW+++ I+  L+  L++
Sbjct: 860  YSDSVEWWDNLEWEEEGIRPMLEPLLKI 887