BLASTX nr result

ID: Coptis24_contig00016383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016383
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE54711.1| hypothetical protein OsJ_02036 [Oryza sativa Japo...    79   4e-13
gb|EEC70788.1| hypothetical protein OsI_02230 [Oryza sativa Indi...    79   4e-13
gb|AFW63421.1| hypothetical protein ZEAMMB73_397358 [Zea mays] g...    76   3e-12
ref|XP_002535295.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
pir||S04583 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain ...    60   1e-07

>gb|EEE54711.1| hypothetical protein OsJ_02036 [Oryza sativa Japonica Group]
          Length = 91

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/44 (93%), Positives = 42/44 (95%)
 Frame = +2

Query: 2   KYASLGALRSAAQMVPYEVSIGLILIVRLVSAFGSAKAIARMFP 133
           KYA LGALRSAAQMVPYEVSIGLILIVRLVS FGSAKAIAR+FP
Sbjct: 48  KYAFLGALRSAAQMVPYEVSIGLILIVRLVSTFGSAKAIARIFP 91


>gb|EEC70788.1| hypothetical protein OsI_02230 [Oryza sativa Indica Group]
          Length = 91

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/44 (93%), Positives = 42/44 (95%)
 Frame = +2

Query: 2   KYASLGALRSAAQMVPYEVSIGLILIVRLVSAFGSAKAIARMFP 133
           KYA LGALRSAAQMVPYEVSIGLILIVRLVS FGSAKAIAR+FP
Sbjct: 48  KYAFLGALRSAAQMVPYEVSIGLILIVRLVSTFGSAKAIARIFP 91


>gb|AFW63421.1| hypothetical protein ZEAMMB73_397358 [Zea mays]
           gi|413923490|gb|AFW63422.1| hypothetical protein
           ZEAMMB73_397358 [Zea mays] gi|413923799|gb|AFW63731.1|
           hypothetical protein ZEAMMB73_879039 [Zea mays]
           gi|413923800|gb|AFW63732.1| hypothetical protein
           ZEAMMB73_879039 [Zea mays]
          Length = 172

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/44 (90%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   KYASLGALRSAAQMVPYEVSIGLILIVRLVSAFGSAKAIARMFP 133
           KYA LGALRSAAQMV YEVSIGLILIVRLVS FGSAKAIAR+FP
Sbjct: 129 KYAFLGALRSAAQMVSYEVSIGLILIVRLVSTFGSAKAIARIFP 172


>ref|XP_002535295.1| conserved hypothetical protein [Ricinus communis]
           gi|223523525|gb|EEF27089.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 139

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/38 (97%), Positives = 37/38 (97%)
 Frame = +2

Query: 20  ALRSAAQMVPYEVSIGLILIVRLVSAFGSAKAIARMFP 133
           ALRSAAQMV YEVSIGLILIVRLVSAFGSAKAIARMFP
Sbjct: 102 ALRSAAQMVSYEVSIGLILIVRLVSAFGSAKAIARMFP 139


>pir||S04583 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 1 - maize
           mitochondrion (fragment)
          Length = 39

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = +2

Query: 2   KYASLGALRSAAQMVPYEVSIGLILIVRLVSAFGS 106
           KYA LGALRSAAQMV YEVSIGLILIVRLVS FGS
Sbjct: 5   KYAFLGALRSAAQMVSYEVSIGLILIVRLVSTFGS 39


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