BLASTX nr result

ID: Coptis24_contig00016367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016367
         (1502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284485.1| PREDICTED: uncharacterized protein LOC100249...   379   e-102
ref|XP_002314801.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
ref|XP_003589653.1| hypothetical protein MTR_1g031620 [Medicago ...   370   e-100
ref|XP_002526033.1| conserved hypothetical protein [Ricinus comm...   366   7e-99
ref|XP_002887333.1| hypothetical protein ARALYDRAFT_476225 [Arab...   355   2e-95

>ref|XP_002284485.1| PREDICTED: uncharacterized protein LOC100249059 [Vitis vinifera]
            gi|147801559|emb|CAN77015.1| hypothetical protein
            VITISV_036885 [Vitis vinifera]
            gi|297737691|emb|CBI26892.3| unnamed protein product
            [Vitis vinifera]
          Length = 248

 Score =  379 bits (972), Expect = e-102
 Identities = 185/250 (74%), Positives = 217/250 (86%)
 Frame = -3

Query: 1215 MSPQTKQSSGKSLKGIHGVHMVPHSPFPVKEDSQCGYLHHSTYYQGSSTEDNRRLFMLRL 1036
            MS Q+K +  ++L G+HGV +VPHSPF ++E ++ G    ST  + SS E N+RL M ++
Sbjct: 1    MSHQSKSNPSRALDGVHGVRVVPHSPFALEEITKPGDFDRSTC-ERSSIEANQRLLM-QV 58

Query: 1035 WQQRPACFRPIRCCLQGDQHVVETIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGVGV 856
            WQQRPAC RP+RCCL GD+ + ET+ANVLTSLPFIALGIQAPRKN N KLYANSLIGVG+
Sbjct: 59   WQQRPACLRPVRCCLNGDESLGETVANVLTSLPFIALGIQAPRKNLNCKLYANSLIGVGI 118

Query: 855  ASSLYHSSRGELRKYLRWADYTMIATATVCLSRALSNENPKLLMAASALFLPVQPLMVSA 676
            AS LYHSSRG+LRKYLRWADYTMIATATVCLSRA+ NENPKLLMAASA FLP+QPLMVSA
Sbjct: 119  ASGLYHSSRGKLRKYLRWADYTMIATATVCLSRAIRNENPKLLMAASAFFLPIQPLMVSA 178

Query: 675  VHTGMMEVAFAKRALSEPELKMAYNVHKMSSLLGGVLFVADDLYPQTPYLHAAWHLAAAV 496
            VHTGMMEVAFAKRAL +P+L+M +NVHKMSSLLGG LF+ADD++P+TP++HAAWHLAAAV
Sbjct: 179  VHTGMMEVAFAKRALDDPDLRMVHNVHKMSSLLGGALFIADDVFPRTPFIHAAWHLAAAV 238

Query: 495  GVSTCNKLLE 466
            GV TCNKLLE
Sbjct: 239  GVGTCNKLLE 248


>ref|XP_002314801.1| predicted protein [Populus trichocarpa] gi|222863841|gb|EEF00972.1|
            predicted protein [Populus trichocarpa]
          Length = 249

 Score =  374 bits (961), Expect = e-101
 Identities = 182/250 (72%), Positives = 212/250 (84%)
 Frame = -3

Query: 1215 MSPQTKQSSGKSLKGIHGVHMVPHSPFPVKEDSQCGYLHHSTYYQGSSTEDNRRLFMLRL 1036
            MS Q+  +  K+L+G+HG+H+VPHSPF +KE +Q G    ST  + S    N+ L M R+
Sbjct: 1    MSHQSTFNPSKTLEGVHGIHVVPHSPFALKEINQQGDFPQSTC-ESSGNGLNQLLLMQRV 59

Query: 1035 WQQRPACFRPIRCCLQGDQHVVETIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGVGV 856
            WQQRP C RPI+ C+ GDQH+ ET+ANV+TSLPFIALGIQAPRKN NTKLYANSLIGVGV
Sbjct: 60   WQQRPGCLRPIQGCIHGDQHLAETVANVITSLPFIALGIQAPRKNLNTKLYANSLIGVGV 119

Query: 855  ASSLYHSSRGELRKYLRWADYTMIATATVCLSRALSNENPKLLMAASALFLPVQPLMVSA 676
            ASSLYHSSRG+LRKYLRW DYTMIATATVCLSRAL NENPK LMAASA  LP+QPLMVSA
Sbjct: 120  ASSLYHSSRGKLRKYLRWFDYTMIATATVCLSRALRNENPKFLMAASAALLPIQPLMVSA 179

Query: 675  VHTGMMEVAFAKRALSEPELKMAYNVHKMSSLLGGVLFVADDLYPQTPYLHAAWHLAAAV 496
            +HTGMMEVAFAKRAL +P+L+MA+N+HKMSSLLGGVLF+ADD +P TP+LHA WHLAAA+
Sbjct: 180  IHTGMMEVAFAKRALKDPDLRMAHNLHKMSSLLGGVLFIADDCFPSTPFLHAGWHLAAAI 239

Query: 495  GVSTCNKLLE 466
            GV TCNKLL+
Sbjct: 240  GVGTCNKLLK 249


>ref|XP_003589653.1| hypothetical protein MTR_1g031620 [Medicago truncatula]
            gi|217071696|gb|ACJ84208.1| unknown [Medicago truncatula]
            gi|355478701|gb|AES59904.1| hypothetical protein
            MTR_1g031620 [Medicago truncatula]
            gi|388519567|gb|AFK47845.1| unknown [Medicago truncatula]
          Length = 251

 Score =  370 bits (950), Expect = e-100
 Identities = 184/252 (73%), Positives = 211/252 (83%), Gaps = 2/252 (0%)
 Frame = -3

Query: 1215 MSPQTKQSSGKSLKGIHGVHMVPHSPFPVKEDSQCGYLHHSTYYQGSSTEDNRRLFMLRL 1036
            MS Q   +  ++L+G+HGVH+VPHSPF + E +Q G LH ST    S+TE N+ L M R+
Sbjct: 1    MSQQRTLNHSRALEGVHGVHVVPHSPFSLTESNQTGGLHPSTGGP-STTEANQLLLMQRV 59

Query: 1035 WQQRPACFRPIRCCLQ--GDQHVVETIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGV 862
            WQQRPAC RPI C     GDQH+ ETIANVLTS+PFIALG+ APRKN + KLYANSLIGV
Sbjct: 60   WQQRPACLRPIHCSASCHGDQHLAETIANVLTSIPFIALGVNAPRKNLSCKLYANSLIGV 119

Query: 861  GVASSLYHSSRGELRKYLRWADYTMIATATVCLSRALSNENPKLLMAASALFLPVQPLMV 682
            GVASS+YH SRG+LRKYLRW DYTMIAT TVCLSRAL NENPKLLMAASA FLPV PLMV
Sbjct: 120  GVASSVYHCSRGKLRKYLRWLDYTMIATTTVCLSRALRNENPKLLMAASAAFLPVNPLMV 179

Query: 681  SAVHTGMMEVAFAKRALSEPELKMAYNVHKMSSLLGGVLFVADDLYPQTPYLHAAWHLAA 502
            + +HTGMMEVAFAKRAL +P+L+MA+ VHKMSSL+GG+LFVADDL+P+TPYLHAAWHLAA
Sbjct: 180  TLIHTGMMEVAFAKRALKDPDLRMAHTVHKMSSLMGGMLFVADDLFPKTPYLHAAWHLAA 239

Query: 501  AVGVSTCNKLLE 466
            AVGV TCNKLLE
Sbjct: 240  AVGVGTCNKLLE 251


>ref|XP_002526033.1| conserved hypothetical protein [Ricinus communis]
            gi|223534680|gb|EEF36373.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 262

 Score =  366 bits (940), Expect = 7e-99
 Identities = 174/250 (69%), Positives = 208/250 (83%)
 Frame = -3

Query: 1215 MSPQTKQSSGKSLKGIHGVHMVPHSPFPVKEDSQCGYLHHSTYYQGSSTEDNRRLFMLRL 1036
            M+ Q+  +  K+L+G+HG+H+VPHSPF ++E +  G    ST         N++L + R 
Sbjct: 14   MNRQSTTNPSKALEGVHGIHVVPHSPFALEEITHQGDFSQSTC-GNLVNRANQQLLLQRA 72

Query: 1035 WQQRPACFRPIRCCLQGDQHVVETIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGVGV 856
            W+QRP C RPIRCC+ GD+H+ ET+ANVLTSLPFIALG+QAPRKN  TK+YANSLIGVGV
Sbjct: 73   WEQRPGCLRPIRCCINGDKHLAETVANVLTSLPFIALGLQAPRKNLTTKMYANSLIGVGV 132

Query: 855  ASSLYHSSRGELRKYLRWADYTMIATATVCLSRALSNENPKLLMAASALFLPVQPLMVSA 676
            ASSLYHSSRG +RKYLRW DYTMIAT TVCLSRAL NENPKLLMAASA  LP++PLMVS 
Sbjct: 133  ASSLYHSSRGRIRKYLRWLDYTMIATTTVCLSRALRNENPKLLMAASAALLPIKPLMVSV 192

Query: 675  VHTGMMEVAFAKRALSEPELKMAYNVHKMSSLLGGVLFVADDLYPQTPYLHAAWHLAAAV 496
            VHTGMMEVAFAKRAL +P+L+MA+N+HKMSSLLGGVLF+ADDL+P TP++HA WH+AAAV
Sbjct: 193  VHTGMMEVAFAKRALKDPDLRMAHNLHKMSSLLGGVLFIADDLFPSTPFIHAGWHIAAAV 252

Query: 495  GVSTCNKLLE 466
            GV TCNKLLE
Sbjct: 253  GVGTCNKLLE 262


>ref|XP_002887333.1| hypothetical protein ARALYDRAFT_476225 [Arabidopsis lyrata subsp.
            lyrata] gi|297333174|gb|EFH63592.1| hypothetical protein
            ARALYDRAFT_476225 [Arabidopsis lyrata subsp. lyrata]
          Length = 244

 Score =  355 bits (910), Expect = 2e-95
 Identities = 171/250 (68%), Positives = 206/250 (82%)
 Frame = -3

Query: 1215 MSPQTKQSSGKSLKGIHGVHMVPHSPFPVKEDSQCGYLHHSTYYQGSSTEDNRRLFMLRL 1036
            MSPQ+  ++ KSL+G+HGVH+V HS F  +   Q       + Y+ +     +RLF+ R+
Sbjct: 1    MSPQSVSTTSKSLEGVHGVHVVSHSHFGFESIGQV------SSYESADAGTKQRLFIERV 54

Query: 1035 WQQRPACFRPIRCCLQGDQHVVETIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGVGV 856
            WQQRP C RPI C + GDQ ++ET ANV+TS+PFI LG+QAPRKN N K+YANSLIGVG+
Sbjct: 55   WQQRPPCLRPIHCSIHGDQSILETAANVITSIPFIFLGMQAPRKNLNMKVYANSLIGVGI 114

Query: 855  ASSLYHSSRGELRKYLRWADYTMIATATVCLSRALSNENPKLLMAASALFLPVQPLMVSA 676
            ASSLYHSSRG+LRKYLRWADYTMIATATVCL+RAL  ENPK LMAASAL LP QPL+VSA
Sbjct: 115  ASSLYHSSRGKLRKYLRWADYTMIATATVCLTRALREENPKFLMAASALALPFQPLVVSA 174

Query: 675  VHTGMMEVAFAKRALSEPELKMAYNVHKMSSLLGGVLFVADDLYPQTPYLHAAWHLAAAV 496
            VHTGMMEVAFAKRAL +P+LKMA++VHKMSSLLGG LF+ADDL+P+TP++HA WHLAAA+
Sbjct: 175  VHTGMMEVAFAKRALEDPDLKMAHDVHKMSSLLGGALFIADDLFPETPFIHAGWHLAAAI 234

Query: 495  GVSTCNKLLE 466
            GV TCNKLL+
Sbjct: 235  GVGTCNKLLQ 244


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