BLASTX nr result

ID: Coptis24_contig00016366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016366
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15799.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002276020.1| PREDICTED: probable LRR receptor-like serine...   117   1e-24
emb|CAN75549.1| hypothetical protein VITISV_043541 [Vitis vinifera]   117   1e-24
ref|XP_003537371.1| PREDICTED: probable LRR receptor-like serine...   116   2e-24
ref|XP_003600556.1| hypothetical protein MTR_3g062590 [Medicago ...   115   4e-24

>emb|CBI15799.3| unnamed protein product [Vitis vinifera]
          Length = 960

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/58 (96%), Positives = 58/58 (100%)
 Frame = -1

Query: 480 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNLAYQSGMIFSVID 307
           LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVN++YQSGMIFSVID
Sbjct: 804 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNVSYQSGMIFSVID 861



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -3

Query: 172  PSMADIVRQLENIWLMMPESDKGTSESM-EAXXXXXXXXXXXXXXKNPYVSADVSGSD 2
            PSMA +VR+LENIWLMMPESD  T+ES+                 KNPYVS+D+SGS+
Sbjct: 891  PSMAQVVRELENIWLMMPESDTKTTESLITEPGKLISPPSSSTPTKNPYVSSDISGSE 948


>ref|XP_002276020.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g06840-like [Vitis vinifera]
          Length = 959

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/58 (96%), Positives = 58/58 (100%)
 Frame = -1

Query: 480 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNLAYQSGMIFSVID 307
           LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVN++YQSGMIFSVID
Sbjct: 803 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNVSYQSGMIFSVID 860



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -3

Query: 172  PSMADIVRQLENIWLMMPESDKGTSESM-EAXXXXXXXXXXXXXXKNPYVSADVSGSD 2
            PSMA +VR+LENIWLMMPESD  T+ES+                 KNPYVS+D+SGS+
Sbjct: 890  PSMAQVVRELENIWLMMPESDTKTTESLITEPGKLISPPSSSTPTKNPYVSSDISGSE 947


>emb|CAN75549.1| hypothetical protein VITISV_043541 [Vitis vinifera]
          Length = 782

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/58 (96%), Positives = 58/58 (100%)
 Frame = -1

Query: 480 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNLAYQSGMIFSVID 307
           LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVN++YQSGMIFSVID
Sbjct: 626 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNVSYQSGMIFSVID 683



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -3

Query: 172 PSMADIVRQLENIWLMMPESDKGTSESM-EAXXXXXXXXXXXXXXKNPYVSADVSGSD 2
           PSMA +VR+LENIWLMMPESD  T+ES+                 KNPYVS+D+SGS+
Sbjct: 713 PSMAQVVRELENIWLMMPESDTKTTESLITEPGKLISPPSSSTPTKNPYVSSDISGSE 770


>ref|XP_003537371.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g06840-like [Glycine max]
          Length = 954

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/58 (94%), Positives = 58/58 (100%)
 Frame = -1

Query: 480 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNLAYQSGMIFSVID 307
           LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVN+AYQSG+IFS+ID
Sbjct: 792 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNVAYQSGVIFSIID 849


>ref|XP_003600556.1| hypothetical protein MTR_3g062590 [Medicago truncatula]
           gi|355489604|gb|AES70807.1| hypothetical protein
           MTR_3g062590 [Medicago truncatula]
          Length = 955

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/58 (93%), Positives = 58/58 (100%)
 Frame = -1

Query: 480 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNLAYQSGMIFSVID 307
           LDPEYFLTHKLTDKSDVYSLGVVFLE+LTGMHPISHGKNIVREVNL+YQSG+IFS+ID
Sbjct: 795 LDPEYFLTHKLTDKSDVYSLGVVFLEILTGMHPISHGKNIVREVNLSYQSGVIFSIID 852


Top