BLASTX nr result

ID: Coptis24_contig00016365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016365
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270593.1| PREDICTED: tubulin-specific chaperone A [Vit...    43   4e-06

>ref|XP_002270593.1| PREDICTED: tubulin-specific chaperone A [Vitis vinifera]
           gi|147854591|emb|CAN82778.1| hypothetical protein
           VITISV_011414 [Vitis vinifera]
           gi|297734639|emb|CBI16690.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score = 42.7 bits (99), Expect(2) = 4e-06
 Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
 Frame = +2

Query: 29  MATFRSLVVETGTCKSSTVNELHSFVRGGERKWP--AALKDKGGDPFDRK**EIVSDESQ 202
           MAT R+L ++T TCK   + E HS+ +  ER+    A +K+KG DP+D K  E V  ES+
Sbjct: 1   MATIRNLKIKTSTCKR-IIKEFHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESR 59



 Score = 32.7 bits (73), Expect(2) = 4e-06
 Identities = 16/30 (53%), Positives = 23/30 (76%)
 Frame = +3

Query: 222 KGSLADMKVTLEELEESFMQKGRELIEARN 311
           + SLAD+K TL ELEES  ++G E+ +AR+
Sbjct: 70  EASLADLKGTLAELEESNQKEGPEIEDARS 99


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