BLASTX nr result

ID: Coptis24_contig00016362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016362
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275264.1| PREDICTED: uncharacterized protein LOC100264...   186   4e-45
emb|CAN83225.1| hypothetical protein VITISV_031369 [Vitis vinifera]   186   4e-45
ref|XP_002309311.1| predicted protein [Populus trichocarpa] gi|2...   175   1e-41
ref|XP_002323289.1| predicted protein [Populus trichocarpa] gi|2...   168   1e-39
ref|XP_002534424.1| conserved hypothetical protein [Ricinus comm...   155   6e-36

>ref|XP_002275264.1| PREDICTED: uncharacterized protein LOC100264119 [Vitis vinifera]
          Length = 189

 Score =  186 bits (472), Expect = 4e-45
 Identities = 102/199 (51%), Positives = 129/199 (64%), Gaps = 4/199 (2%)
 Frame = -1

Query: 735 MVGPFQLKPLHSLHVFTMKSPFYNSTHSMKIKTLVHS--FQHMWQVLRALTKVKSMFMQL 562
           MVGP  LK  HS HVF+MKSP      SMK+KTL+H+  F H+ ++ RAL + KS+ + +
Sbjct: 1   MVGPSHLKAPHSFHVFSMKSPSSTFQQSMKLKTLIHTLIFSHLCRIARALARAKSILIDV 60

Query: 561 LDKNKDNXXXXXXXXXXXXXXXXXXXXXXIMHYNWCSSNVIPMPQPVVDEVYTRHEYFDS 382
           L +N                          +HYNWCSS+V+P+  PV+D   T H Y+DS
Sbjct: 61  LKENH--------LMHMKKKKQKKIFGSIRLHYNWCSSHVMPVSTPVLDGFSTSHLYYDS 112

Query: 381 TWNTIVPAEDYYQDELSSQLSGYLKWLEEK-VPENS-IDGDLYEIDRLADKFIANCHEKF 208
           TWN+I+P E   +D    QLSGYL WLEEK V +NS ++ D+ EID+LAD FIAN HEKF
Sbjct: 113 TWNSIIPPE--CEDMAERQLSGYLHWLEEKKVHDNSTVEPDMNEIDKLADMFIANSHEKF 170

Query: 207 RLEKQESYRRYQEMLARSM 151
           RLEKQESYRR+QEMLARSM
Sbjct: 171 RLEKQESYRRFQEMLARSM 189


>emb|CAN83225.1| hypothetical protein VITISV_031369 [Vitis vinifera]
          Length = 357

 Score =  186 bits (472), Expect = 4e-45
 Identities = 102/199 (51%), Positives = 129/199 (64%), Gaps = 4/199 (2%)
 Frame = -1

Query: 735 MVGPFQLKPLHSLHVFTMKSPFYNSTHSMKIKTLVHS--FQHMWQVLRALTKVKSMFMQL 562
           MVGP  LK  HS HVF+MKSP      SMK+KTL+H+  F H+ ++ RAL + KS+ + +
Sbjct: 1   MVGPSHLKAPHSFHVFSMKSPSSTFQQSMKLKTLIHTLIFSHLCRIARALARAKSILIDV 60

Query: 561 LDKNKDNXXXXXXXXXXXXXXXXXXXXXXIMHYNWCSSNVIPMPQPVVDEVYTRHEYFDS 382
           L +N                          +HYNWCSS+V+P+  PV+D   T H Y+DS
Sbjct: 61  LKENH--------LMHMKKKKQKKIFGSIRLHYNWCSSHVMPVSTPVLDGFSTSHLYYDS 112

Query: 381 TWNTIVPAEDYYQDELSSQLSGYLKWLEEK-VPENS-IDGDLYEIDRLADKFIANCHEKF 208
           TWN+I+P E   +D    QLSGYL WLEEK V +NS ++ D+ EID+LAD FIAN HEKF
Sbjct: 113 TWNSIIPPE--CEDMAERQLSGYLHWLEEKKVHDNSTVEPDMNEIDKLADMFIANSHEKF 170

Query: 207 RLEKQESYRRYQEMLARSM 151
           RLEKQESYRR+QEMLARSM
Sbjct: 171 RLEKQESYRRFQEMLARSM 189


>ref|XP_002309311.1| predicted protein [Populus trichocarpa] gi|222855287|gb|EEE92834.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  175 bits (443), Expect = 1e-41
 Identities = 94/195 (48%), Positives = 126/195 (64%), Gaps = 3/195 (1%)
 Frame = -1

Query: 726 PFQLKPLHSLHVFTMKSPFYNSTHSMKIKTLVHSF--QHMWQVLRALTKVKSMFMQLLDK 553
           P  LK LH L VF+ KSP  ++  SMKIKTL+H+    H+ +++RAL+K KS+ +++L +
Sbjct: 5   PSFLKTLHPLQVFSTKSPS-STLSSMKIKTLIHTLIISHVCRIIRALSKAKSILVEILKE 63

Query: 552 NKD-NXXXXXXXXXXXXXXXXXXXXXXIMHYNWCSSNVIPMPQPVVDEVYTRHEYFDSTW 376
           N+  +                       +HYNWCSS+V+P+ +PV+D     H Y+DSTW
Sbjct: 64  NQPLHFIFPTKNSKRKNRSRKIFLGSFRLHYNWCSSHVLPVSEPVLDGFSASHFYYDSTW 123

Query: 375 NTIVPAEDYYQDELSSQLSGYLKWLEEKVPENSIDGDLYEIDRLADKFIANCHEKFRLEK 196
           N+I+  E Y +D   SQLSGYL WLEEKV      G   +I+RLAD FIA+CHEKF LEK
Sbjct: 124 NSIITNEQY-EDNTESQLSGYLHWLEEKVDGEESSGTEKDINRLADLFIASCHEKFILEK 182

Query: 195 QESYRRYQEMLARSM 151
           QESYRR+QEM+ARSM
Sbjct: 183 QESYRRFQEMMARSM 197


>ref|XP_002323289.1| predicted protein [Populus trichocarpa] gi|222867919|gb|EEF05050.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score =  168 bits (425), Expect = 1e-39
 Identities = 91/196 (46%), Positives = 125/196 (63%), Gaps = 4/196 (2%)
 Frame = -1

Query: 726 PFQLKPLHSLHVFTMKSPFYNSTHSMKIKTLVHS--FQHMWQVLRALTKVKSMFMQLLDK 553
           P  L+ LH L VF+ K P  ++  SMKIKTL+H+    H+ +++RAL+K KS+ +++L +
Sbjct: 5   PSYLRNLHPLQVFSKKPPS-STLSSMKIKTLIHTLIISHVCRIVRALSKAKSVVIEILKE 63

Query: 552 NK--DNXXXXXXXXXXXXXXXXXXXXXXIMHYNWCSSNVIPMPQPVVDEVYTRHEYFDST 379
           N+                           +HYNWCSS+V+P+P+PV+D   + H Y+DST
Sbjct: 64  NQHLHFFISPTKNSKKKQKHQKIFLGSFRLHYNWCSSHVLPVPEPVLDGFSSSHFYYDST 123

Query: 378 WNTIVPAEDYYQDELSSQLSGYLKWLEEKVPENSIDGDLYEIDRLADKFIANCHEKFRLE 199
           WN+I+  E   +D   SQLSGYL WL+EKV +    G   +I+RLAD FIANCHEKF LE
Sbjct: 124 WNSIITNEQ-CEDNTESQLSGYLHWLDEKVDDEGPKGIEKDINRLADLFIANCHEKFILE 182

Query: 198 KQESYRRYQEMLARSM 151
           KQESYRR+Q M+ARSM
Sbjct: 183 KQESYRRFQAMMARSM 198


>ref|XP_002534424.1| conserved hypothetical protein [Ricinus communis]
           gi|223525315|gb|EEF27958.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 205

 Score =  155 bits (393), Expect = 6e-36
 Identities = 88/186 (47%), Positives = 118/186 (63%), Gaps = 19/186 (10%)
 Frame = -1

Query: 651 MKIKTLVHSF--QHMWQVLRALTKVKSMFMQLLDKNKD-NXXXXXXXXXXXXXXXXXXXX 481
           MKIKTL+H+    H+ +++RAL+K KS+ +Q+L +N+  N                    
Sbjct: 1   MKIKTLIHTLIMSHVCRIVRALSKAKSILVQILKENQPINFIYPTKATKRKHRERKIFFG 60

Query: 480 XXIMHYNWCSSNVIPMPQPVVDEVY-TRHEYFDSTWNTIVPAEDYYQDELSSQLSGYLKW 304
              +HYNWCSS+V+P+P PV+D    T H Y+DSTWN+I+   D + +  SSQLSGYL+W
Sbjct: 61  SFRLHYNWCSSHVLPVPAPVLDGFSSTPHLYYDSTWNSIITTSDEHDE--SSQLSGYLRW 118

Query: 303 LEEKVPE-----------NSIDGD----LYEIDRLADKFIANCHEKFRLEKQESYRRYQE 169
           LEEK              N+ +GD    + EIDRLAD FIA+CHEKFRLEKQESYRR+QE
Sbjct: 119 LEEKKVNQENSTTNNNNSNNSNGDQGDVVNEIDRLADMFIASCHEKFRLEKQESYRRFQE 178

Query: 168 MLARSM 151
           M+ARS+
Sbjct: 179 MMARSI 184


Top