BLASTX nr result

ID: Coptis24_contig00016360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016360
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638081.1| NPL4-like protein [Medicago truncatula] gi|3...   321   1e-85
ref|XP_002270748.1| PREDICTED: NPL4-like protein 2 [Vitis vinifera]   321   1e-85
ref|XP_002321042.1| predicted protein [Populus trichocarpa] gi|2...   319   4e-85
emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera]   319   5e-85
ref|XP_002302817.1| predicted protein [Populus trichocarpa] gi|1...   316   3e-84

>ref|XP_003638081.1| NPL4-like protein [Medicago truncatula] gi|355504016|gb|AES85219.1|
           NPL4-like protein [Medicago truncatula]
          Length = 414

 Score =  321 bits (823), Expect = 1e-85
 Identities = 162/241 (67%), Positives = 184/241 (76%)
 Frame = +2

Query: 56  IRIRSRDGLERVTITNPQTTTISDLKTQIQTQLNIPIPXXXXXXXXXXXXXKTPQQITQF 235
           +RIRSRDGLERVT+ NP   T+SDLKT I+ QL IP               K+ Q +  F
Sbjct: 3   LRIRSRDGLERVTLDNPNNKTVSDLKTIIEKQLRIPTHNQTLSTNQNLLLAKSLQDLLLF 62

Query: 236 TDMSNPKTLISTLGITHGSIIYLTYEGERNIAGPKIVTPAGSFGKKMTMDDLIAKQMRVT 415
           TDMSNP T ++ L ++HGSII+L YEGER + GP   +PAGSFGKKMTMDDLIAKQMRV+
Sbjct: 63  TDMSNPNTPLTALNLSHGSIIFLAYEGERTVQGPAAFSPAGSFGKKMTMDDLIAKQMRVS 122

Query: 416 RQETAHCESVSFDRDTANVFQSYVNENLAFAVKRGGFMYGTVGEDGRVEVDFIYEMPQQG 595
           RQE  HCE VSFDRD AN FQ YVNENLAFAVKRGGFMYGTV E+G+VEV+FIYE PQQG
Sbjct: 123 RQENPHCELVSFDRDCANAFQHYVNENLAFAVKRGGFMYGTVTEEGKVEVNFIYEPPQQG 182

Query: 596 SEEGLLLFRDENEEKCVEAIAGSLGMRKVGFIFTQTISQGNKDYTLSNVEVLQAAELHGE 775
            E+ LL FRD  EEKCVEAIA  LGM++VGFIFTQ++SQ  KDYTLS  EVLQAAE H E
Sbjct: 183 LEDNLLFFRDPEEEKCVEAIAAGLGMKRVGFIFTQSVSQDKKDYTLSYREVLQAAEYHAE 242

Query: 776 S 778
           S
Sbjct: 243 S 243


>ref|XP_002270748.1| PREDICTED: NPL4-like protein 2 [Vitis vinifera]
          Length = 411

 Score =  321 bits (823), Expect = 1e-85
 Identities = 164/241 (68%), Positives = 189/241 (78%)
 Frame = +2

Query: 56  IRIRSRDGLERVTITNPQTTTISDLKTQIQTQLNIPIPXXXXXXXXXXXXXKTPQQITQF 235
           IRIRSRDGLER+T+ NP  T IS LKT IQ  L+IPI              KTP  I +F
Sbjct: 3   IRIRSRDGLERLTLDNPHAT-ISQLKTLIQQHLHIPISSQTLSTNQNLLLAKTPSDIARF 61

Query: 236 TDMSNPKTLISTLGITHGSIIYLTYEGERNIAGPKIVTPAGSFGKKMTMDDLIAKQMRVT 415
           TDMS+P+T I+ LG+THGSI+YL ++ +R ++GP   +PAGSFG++MTMDDLIAKQMRVT
Sbjct: 62  TDMSDPQTPIAALGVTHGSIVYLAHDTQRTVSGPTF-SPAGSFGRRMTMDDLIAKQMRVT 120

Query: 416 RQETAHCESVSFDRDTANVFQSYVNENLAFAVKRGGFMYGTVGEDGRVEVDFIYEMPQQG 595
           RQET HCESVSFDRD AN FQ YVNE L FAVKRGGFMYGTV +DG V VDFIYE PQQG
Sbjct: 121 RQETPHCESVSFDRDAANAFQHYVNETLVFAVKRGGFMYGTVADDGAVRVDFIYEPPQQG 180

Query: 596 SEEGLLLFRDENEEKCVEAIAGSLGMRKVGFIFTQTISQGNKDYTLSNVEVLQAAELHGE 775
           +EE L+L RD +EE+ V+AIA  LGMR+VGFIFTQTISQ  KDYT+SN EVLQAAELHGE
Sbjct: 181 TEENLILMRDTDEERLVDAIAMGLGMRRVGFIFTQTISQNKKDYTMSNSEVLQAAELHGE 240

Query: 776 S 778
           S
Sbjct: 241 S 241


>ref|XP_002321042.1| predicted protein [Populus trichocarpa] gi|222861815|gb|EEE99357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score =  319 bits (818), Expect = 4e-85
 Identities = 168/241 (69%), Positives = 186/241 (77%)
 Frame = +2

Query: 56  IRIRSRDGLERVTITNPQTTTISDLKTQIQTQLNIPIPXXXXXXXXXXXXXKTPQQITQF 235
           IRIRSRDGLERV+I NP  T IS  KT IQ QL IPI              K+P  + QF
Sbjct: 3   IRIRSRDGLERVSIDNPNIT-ISQFKTLIQNQLQIPIHNQTLSTNQNLLLAKSPPDLLQF 61

Query: 236 TDMSNPKTLISTLGITHGSIIYLTYEGERNIAGPKIVTPAGSFGKKMTMDDLIAKQMRVT 415
           TDMSNP TL+S+L I+HGSII+L YEG R IAGP  V PAGSFG+KMTMDDLIAKQMRV 
Sbjct: 62  TDMSNPSTLLSSLNISHGSIIFLAYEGHRTIAGPA-VHPAGSFGRKMTMDDLIAKQMRVG 120

Query: 416 RQETAHCESVSFDRDTANVFQSYVNENLAFAVKRGGFMYGTVGEDGRVEVDFIYEMPQQG 595
           RQE  HC+SVSFDRD AN FQ YVNE LAFAVKRGGFMYGTV E+G+VEV+FIYE+PQQG
Sbjct: 121 RQENPHCDSVSFDRDCANAFQHYVNETLAFAVKRGGFMYGTVSEEGKVEVNFIYELPQQG 180

Query: 596 SEEGLLLFRDENEEKCVEAIAGSLGMRKVGFIFTQTISQGNKDYTLSNVEVLQAAELHGE 775
           +EE L+L RD +EEK V+AIA  LGMR+VGFIF QTI    KDYTLSN EVLQAAELH E
Sbjct: 181 TEEILMLLRDSDEEKIVDAIAAGLGMRRVGFIFNQTIMHDKKDYTLSNREVLQAAELHAE 240

Query: 776 S 778
           S
Sbjct: 241 S 241


>emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera]
          Length = 1616

 Score =  319 bits (817), Expect = 5e-85
 Identities = 163/241 (67%), Positives = 188/241 (78%)
 Frame = +2

Query: 56  IRIRSRDGLERVTITNPQTTTISDLKTQIQTQLNIPIPXXXXXXXXXXXXXKTPQQITQF 235
           IRIRSRDGLER+T+ NP  T IS LKT IQ  L+IPI              KTP  I +F
Sbjct: 3   IRIRSRDGLERLTLDNPHAT-ISQLKTLIQQHLHIPISSQTLSTNQNLLLAKTPSDIARF 61

Query: 236 TDMSNPKTLISTLGITHGSIIYLTYEGERNIAGPKIVTPAGSFGKKMTMDDLIAKQMRVT 415
           TDMS+P+T I+ LG+THGSI+YL ++ +R ++GP   +PAGSFG++MTMDDLIAKQMRVT
Sbjct: 62  TDMSDPQTPIAALGVTHGSIVYLAHDTQRTVSGPTF-SPAGSFGRRMTMDDLIAKQMRVT 120

Query: 416 RQETAHCESVSFDRDTANVFQSYVNENLAFAVKRGGFMYGTVGEDGRVEVDFIYEMPQQG 595
           RQET HCESVSFDRD AN FQ YVNE L FAVKRGGFMYGTV +DG V VDFIYE PQQG
Sbjct: 121 RQETPHCESVSFDRDAANAFQHYVNETLVFAVKRGGFMYGTVADDGAVRVDFIYEPPQQG 180

Query: 596 SEEGLLLFRDENEEKCVEAIAGSLGMRKVGFIFTQTISQGNKDYTLSNVEVLQAAELHGE 775
           +EE L+L RD +EE+ V+AIA  LGM +VGFIFTQTISQ  KDYT+SN EVLQAAELHGE
Sbjct: 181 TEENLILMRDTDEERLVDAIAMGLGMXRVGFIFTQTISQNKKDYTMSNSEVLQAAELHGE 240

Query: 776 S 778
           S
Sbjct: 241 S 241


>ref|XP_002302817.1| predicted protein [Populus trichocarpa] gi|118484264|gb|ABK94012.1|
           unknown [Populus trichocarpa]
           gi|222844543|gb|EEE82090.1| predicted protein [Populus
           trichocarpa]
          Length = 411

 Score =  316 bits (810), Expect = 3e-84
 Identities = 165/241 (68%), Positives = 187/241 (77%)
 Frame = +2

Query: 56  IRIRSRDGLERVTITNPQTTTISDLKTQIQTQLNIPIPXXXXXXXXXXXXXKTPQQITQF 235
           +RIRSRDGLERV+I N   T +S LKT IQ QL IPI              K+P  + +F
Sbjct: 4   VRIRSRDGLERVSIDNTNIT-VSQLKTLIQNQLQIPIRSQTLSTNQSLLLAKSPSDLLKF 62

Query: 236 TDMSNPKTLISTLGITHGSIIYLTYEGERNIAGPKIVTPAGSFGKKMTMDDLIAKQMRVT 415
           TDMSNP T +S+L I+HGS+I+L Y+GER IAGP  V PAGSFG+KMT+DDLIAKQMRVT
Sbjct: 63  TDMSNPDTPLSSLSISHGSLIFLAYDGERTIAGPA-VRPAGSFGRKMTIDDLIAKQMRVT 121

Query: 416 RQETAHCESVSFDRDTANVFQSYVNENLAFAVKRGGFMYGTVGEDGRVEVDFIYEMPQQG 595
           RQE  HC+SVSFDRD AN FQ YVNE LAFAVKRGGFMYGTV E+G+VEVDFIYE PQQG
Sbjct: 122 RQENPHCDSVSFDRDCANAFQHYVNETLAFAVKRGGFMYGTVSEEGKVEVDFIYEPPQQG 181

Query: 596 SEEGLLLFRDENEEKCVEAIAGSLGMRKVGFIFTQTISQGNKDYTLSNVEVLQAAELHGE 775
           +EE L+L RD +EEK VEAI   LGMR+VGFIFTQTI Q  KDYTLS+ EVLQAAELH E
Sbjct: 182 TEEVLMLLRDSDEEKLVEAITACLGMRRVGFIFTQTIMQDKKDYTLSHREVLQAAELHAE 241

Query: 776 S 778
           S
Sbjct: 242 S 242


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