BLASTX nr result

ID: Coptis24_contig00016359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016359
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23585.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002280839.1| PREDICTED: actin-related protein 9-like [Vit...   118   4e-25
ref|XP_002529309.1| conserved hypothetical protein [Ricinus comm...   116   2e-24
ref|XP_003556349.1| PREDICTED: actin-related protein 9-like [Gly...   113   1e-23
ref|XP_003535445.1| PREDICTED: actin-related protein 9-like [Gly...   112   2e-23

>emb|CBI23585.3| unnamed protein product [Vitis vinifera]
          Length = 632

 Score =  118 bits (296), Expect = 4e-25
 Identities = 52/64 (81%), Positives = 59/64 (92%)
 Frame = +3

Query: 3   VLPSRTDPTFVSWRGGSILAILDIGREAWIHREDWIRNGIHVASGRKYKDSFFLQAQAMC 182
           VL SRT+PTFVSW+GG+IL ILD GR+AWIHREDWIR GIHV SGRKYKDS++LQAQAMC
Sbjct: 569 VLQSRTNPTFVSWKGGAILGILDFGRDAWIHREDWIRRGIHVGSGRKYKDSYYLQAQAMC 628

Query: 183 YMNS 194
           Y+NS
Sbjct: 629 YINS 632


>ref|XP_002280839.1| PREDICTED: actin-related protein 9-like [Vitis vinifera]
          Length = 602

 Score =  118 bits (296), Expect = 4e-25
 Identities = 52/64 (81%), Positives = 59/64 (92%)
 Frame = +3

Query: 3   VLPSRTDPTFVSWRGGSILAILDIGREAWIHREDWIRNGIHVASGRKYKDSFFLQAQAMC 182
           VL SRT+PTFVSW+GG+IL ILD GR+AWIHREDWIR GIHV SGRKYKDS++LQAQAMC
Sbjct: 539 VLQSRTNPTFVSWKGGAILGILDFGRDAWIHREDWIRRGIHVGSGRKYKDSYYLQAQAMC 598

Query: 183 YMNS 194
           Y+NS
Sbjct: 599 YINS 602


>ref|XP_002529309.1| conserved hypothetical protein [Ricinus communis]
           gi|223531233|gb|EEF33078.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 589

 Score =  116 bits (291), Expect = 2e-24
 Identities = 49/64 (76%), Positives = 59/64 (92%)
 Frame = +3

Query: 3   VLPSRTDPTFVSWRGGSILAILDIGREAWIHREDWIRNGIHVASGRKYKDSFFLQAQAMC 182
           VL SR +PTFV+W+GG+IL +LD GR+AWIHREDWIRNGIH+ SGRKYKDS++LQAQAMC
Sbjct: 526 VLQSRINPTFVTWKGGAILGVLDFGRDAWIHREDWIRNGIHIGSGRKYKDSYYLQAQAMC 585

Query: 183 YMNS 194
           Y+NS
Sbjct: 586 YINS 589


>ref|XP_003556349.1| PREDICTED: actin-related protein 9-like [Glycine max]
          Length = 589

 Score =  113 bits (283), Expect = 1e-23
 Identities = 48/64 (75%), Positives = 58/64 (90%)
 Frame = +3

Query: 3   VLPSRTDPTFVSWRGGSILAILDIGREAWIHREDWIRNGIHVASGRKYKDSFFLQAQAMC 182
           VL SRT+PTFVSW+GG+IL +LD+GR+AWI REDWI NG+HV S +KYKDS++LQAQAMC
Sbjct: 526 VLQSRTNPTFVSWKGGAILGVLDLGRDAWISREDWIHNGVHVGSNKKYKDSYYLQAQAMC 585

Query: 183 YMNS 194
           YMNS
Sbjct: 586 YMNS 589


>ref|XP_003535445.1| PREDICTED: actin-related protein 9-like [Glycine max]
          Length = 591

 Score =  112 bits (281), Expect = 2e-23
 Identities = 48/64 (75%), Positives = 57/64 (89%)
 Frame = +3

Query: 3   VLPSRTDPTFVSWRGGSILAILDIGREAWIHREDWIRNGIHVASGRKYKDSFFLQAQAMC 182
           VL SR +PTFVSW+GG+IL +LD+GR+AWI REDWI NG+HV S RKYKDS++LQAQAMC
Sbjct: 528 VLQSRANPTFVSWKGGAILGVLDLGRDAWISREDWIHNGVHVGSNRKYKDSYYLQAQAMC 587

Query: 183 YMNS 194
           YMNS
Sbjct: 588 YMNS 591


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