BLASTX nr result

ID: Coptis24_contig00016357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016357
         (1357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283732.2| PREDICTED: neuroguidin-like [Vitis vinifera]...   360   6e-97
emb|CAN72154.1| hypothetical protein VITISV_019017 [Vitis vinifera]   357   4e-96
emb|CBI40366.3| unnamed protein product [Vitis vinifera]              352   1e-94
ref|XP_002274529.1| PREDICTED: neuroguidin-B-like [Vitis vinifera]    350   6e-94
emb|CAN69547.1| hypothetical protein VITISV_005614 [Vitis vinifera]   346   9e-93

>ref|XP_002283732.2| PREDICTED: neuroguidin-like [Vitis vinifera]
            gi|302142084|emb|CBI19287.3| unnamed protein product
            [Vitis vinifera]
          Length = 320

 Score =  360 bits (923), Expect = 6e-97
 Identities = 189/314 (60%), Positives = 233/314 (74%), Gaps = 7/314 (2%)
 Frame = +2

Query: 191  DSSLLKEDGPQLAALLKEMKQGLDAVTNKVQSLITKVKENEFPTVNGFSYLEAKHLLLIS 370
            ++ +++++   LAA+LKEMK+GLDAV  KVQ+L  KVK + FPT +G SYLEAKHLLLI+
Sbjct: 7    NNEIIRKEASHLAAVLKEMKEGLDAVRGKVQALTAKVKADHFPTADGMSYLEAKHLLLIN 66

Query: 371  YCESIVYYLLRKAKGLEIEGHPVVRSLVEIRLFLEKIRPIDKKLGYQIQKLLRIAGGVGK 550
            YC+S+VYYLLRKAKG  IEGHPVVRSLVE+RLFLEKIRPIDKKL YQIQKL R+ G   +
Sbjct: 67   YCQSLVYYLLRKAKGFSIEGHPVVRSLVEMRLFLEKIRPIDKKLQYQIQKLTRVTGNAVE 126

Query: 551  KVEDDEKETNASKNNEDLLRYRPNPDMLVKRSDVDTQDG---DGVYRPPKIAPT----EE 709
            KV   EK++  + N EDLL+YRPNPDMLV ++D   +DG    GVYRPPK APT    ++
Sbjct: 127  KVGPSEKDSE-TPNTEDLLKYRPNPDMLVSKTDTTFEDGVGPVGVYRPPKFAPTSMEEDK 185

Query: 710  MSKLEKIALRKDKMLHQKAKQSDFMRGLMDDLEGKPEEVKETFGAESRDLKRYRARMDER 889
            +SK EK ALRK+K   ++A+QS ++R LMDDLEG+PEEV+E  G ESR+L RY+ +M++R
Sbjct: 186  ISKHEKNALRKEKETVRQARQSTYVRELMDDLEGRPEEVREIVGTESRELIRYKEKMEQR 245

Query: 890  ARQEEELFTRAPLTXXXXXXXXXXXXSSNGLSALTDGFDDEIKTFGFEGDESTRTPGFNN 1069
            ARQEEELFTRAPLT            S NGL  LTD F DEIKT   E D   +T GFNN
Sbjct: 246  ARQEEELFTRAPLTRMEKKKEKHLRKSRNGLLGLTDSFYDEIKTLPLEEDFGEKTTGFNN 305

Query: 1070 PSSRGKKFNKHKRK 1111
             SS G+KF K KR+
Sbjct: 306  SSSGGRKFKKRKRR 319


>emb|CAN72154.1| hypothetical protein VITISV_019017 [Vitis vinifera]
          Length = 807

 Score =  357 bits (916), Expect = 4e-96
 Identities = 188/312 (60%), Positives = 231/312 (74%), Gaps = 7/312 (2%)
 Frame = +2

Query: 191  DSSLLKEDGPQLAALLKEMKQGLDAVTNKVQSLITKVKENEFPTVNGFSYLEAKHLLLIS 370
            ++ +++++   LAA+LKEMK+GLDAV  KVQ+L  KVK + FPT +G SYLEAKHLLLI+
Sbjct: 456  NNEIIRKEASHLAAVLKEMKEGLDAVRGKVQALTAKVKADHFPTADGMSYLEAKHLLLIN 515

Query: 371  YCESIVYYLLRKAKGLEIEGHPVVRSLVEIRLFLEKIRPIDKKLGYQIQKLLRIAGGVGK 550
            YC+S+VYYLLRKAKG  IEGHPVVRSLVE+RLFLEKIRPIDKKL YQIQKL R+ G   +
Sbjct: 516  YCQSLVYYLLRKAKGFSIEGHPVVRSLVEMRLFLEKIRPIDKKLQYQIQKLTRVTGNAVE 575

Query: 551  KVEDDEKETNASKNNEDLLRYRPNPDMLVKRSDVDTQDG---DGVYRPPKIAPT----EE 709
            KV   EK++  + N EDLL+YRPNPDMLV ++D   +DG    GVYRPPK APT    ++
Sbjct: 576  KVGPSEKDSE-TPNTEDLLKYRPNPDMLVSKTDTTFEDGVGPVGVYRPPKFAPTSMEEDK 634

Query: 710  MSKLEKIALRKDKMLHQKAKQSDFMRGLMDDLEGKPEEVKETFGAESRDLKRYRARMDER 889
            +SK EK ALRK+K   ++A+QS ++R LMDDLEG+PEEV+E  G ESR+L RY+ +M++R
Sbjct: 635  ISKHEKNALRKEKETVRQARQSTYVRELMDDLEGRPEEVREIVGTESRELIRYKEKMEQR 694

Query: 890  ARQEEELFTRAPLTXXXXXXXXXXXXSSNGLSALTDGFDDEIKTFGFEGDESTRTPGFNN 1069
            ARQEEELFTRAPLT            S NGL  LTD F DEIKT   E D   +T GFNN
Sbjct: 695  ARQEEELFTRAPLTRMEKKKEKHLRKSRNGLLGLTDSFYDEIKTLPLEEDFGEKTTGFNN 754

Query: 1070 PSSRGKKFNKHK 1105
             SS G+KF K K
Sbjct: 755  SSSGGRKFKKRK 766


>emb|CBI40366.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  352 bits (903), Expect = 1e-94
 Identities = 187/321 (58%), Positives = 234/321 (72%), Gaps = 5/321 (1%)
 Frame = +2

Query: 164  LLSCVGKMGDSSLLKEDGPQLAALLKEMKQGLDAVTNKVQSLITKVKENEFPTVNGFSYL 343
            LL+  G+  +   ++++  QL A+LKEMK+GLDAV +KVQ+L  KVK + FPT +G SYL
Sbjct: 44   LLAMEGETTNIERVRKEASQLVAVLKEMKEGLDAVRSKVQALTAKVKADHFPTADGMSYL 103

Query: 344  EAKHLLLISYCESIVYYLLRKAKGLEIEGHPVVRSLVEIRLFLEKIRPIDKKLGYQIQKL 523
            EAKHLLL+ YC+S+VYYLLRKAKGL IEGHPVV SLVEIRLFLEKIRPIDKKL YQIQKL
Sbjct: 104  EAKHLLLLDYCQSLVYYLLRKAKGLSIEGHPVVHSLVEIRLFLEKIRPIDKKLQYQIQKL 163

Query: 524  LRIAGGVGKKVEDDEKETNASKNNEDLLRYRPNPDMLVKRSDVDTQDG-DGVYRPPKIAP 700
             R+ G   +KV   EK++  ++N EDLL+YRPNPDML+ ++D+ ++ G  GVYRPPK AP
Sbjct: 164  TRVTGNAVEKVSSGEKDSE-TQNTEDLLKYRPNPDMLISKTDMTSEGGVGGVYRPPKFAP 222

Query: 701  T----EEMSKLEKIALRKDKMLHQKAKQSDFMRGLMDDLEGKPEEVKETFGAESRDLKRY 868
                 ++MSK E+  LRK+K   ++A+QS ++R LMDDLEG+PEEV+E  G ESR+L RY
Sbjct: 223  ASMEEDKMSKQERNVLRKEKETLRQARQSAYVRELMDDLEGRPEEVREIVGTESRELIRY 282

Query: 869  RARMDERARQEEELFTRAPLTXXXXXXXXXXXXSSNGLSALTDGFDDEIKTFGFEGDEST 1048
            + +M++RARQEEELFTRAPLT            S NGL  LTD F DEIKT   E D   
Sbjct: 283  KEKMEQRARQEEELFTRAPLTRTEKKKEKHLRKSRNGLLGLTDSFYDEIKTLPMEEDFGE 342

Query: 1049 RTPGFNNPSSRGKKFNKHKRK 1111
            +  GFNN  S G+KF K KRK
Sbjct: 343  KMSGFNN--SGGRKFKKRKRK 361


>ref|XP_002274529.1| PREDICTED: neuroguidin-B-like [Vitis vinifera]
          Length = 316

 Score =  350 bits (897), Expect = 6e-94
 Identities = 185/316 (58%), Positives = 231/316 (73%), Gaps = 5/316 (1%)
 Frame = +2

Query: 179  GKMGDSSLLKEDGPQLAALLKEMKQGLDAVTNKVQSLITKVKENEFPTVNGFSYLEAKHL 358
            G+  +   ++++  QL A+LKEMK+GLDAV +KVQ+L  KVK + FPT +G SYLEAKHL
Sbjct: 3    GETTNIERVRKEASQLVAVLKEMKEGLDAVRSKVQALTAKVKADHFPTADGMSYLEAKHL 62

Query: 359  LLISYCESIVYYLLRKAKGLEIEGHPVVRSLVEIRLFLEKIRPIDKKLGYQIQKLLRIAG 538
            LL+ YC+S+VYYLLRKAKGL IEGHPVV SLVEIRLFLEKIRPIDKKL YQIQKL R+ G
Sbjct: 63   LLLDYCQSLVYYLLRKAKGLSIEGHPVVHSLVEIRLFLEKIRPIDKKLQYQIQKLTRVTG 122

Query: 539  GVGKKVEDDEKETNASKNNEDLLRYRPNPDMLVKRSDVDTQDG-DGVYRPPKIAPT---- 703
               +KV   EK++  ++N EDLL+YRPNPDML+ ++D+ ++ G  GVYRPPK AP     
Sbjct: 123  NAVEKVSSGEKDSE-TQNTEDLLKYRPNPDMLISKTDMTSEGGVGGVYRPPKFAPASMEE 181

Query: 704  EEMSKLEKIALRKDKMLHQKAKQSDFMRGLMDDLEGKPEEVKETFGAESRDLKRYRARMD 883
            ++MSK E+  LRK+K   ++A+QS ++R LMDDLEG+PEEV+E  G ESR+L RY+ +M+
Sbjct: 182  DKMSKQERNVLRKEKETLRQARQSAYVRELMDDLEGRPEEVREIVGTESRELIRYKEKME 241

Query: 884  ERARQEEELFTRAPLTXXXXXXXXXXXXSSNGLSALTDGFDDEIKTFGFEGDESTRTPGF 1063
            +RARQEEELFTRAPLT            S NGL  LTD F DEIKT   E D   +  GF
Sbjct: 242  QRARQEEELFTRAPLTRTEKKKEKHLRKSRNGLLGLTDSFYDEIKTLPMEEDFGEKMSGF 301

Query: 1064 NNPSSRGKKFNKHKRK 1111
            NN  S G+KF K KRK
Sbjct: 302  NN--SGGRKFKKRKRK 315


>emb|CAN69547.1| hypothetical protein VITISV_005614 [Vitis vinifera]
          Length = 340

 Score =  346 bits (887), Expect = 9e-93
 Identities = 183/314 (58%), Positives = 229/314 (72%), Gaps = 5/314 (1%)
 Frame = +2

Query: 179  GKMGDSSLLKEDGPQLAALLKEMKQGLDAVTNKVQSLITKVKENEFPTVNGFSYLEAKHL 358
            G+  +   ++++  QL A+LKEMK+GLDAV +KVQ+L  KVK + FPT +G SYLEAKHL
Sbjct: 3    GETTNIERVRKEASQLVAVLKEMKEGLDAVRSKVQALTAKVKADHFPTADGMSYLEAKHL 62

Query: 359  LLISYCESIVYYLLRKAKGLEIEGHPVVRSLVEIRLFLEKIRPIDKKLGYQIQKLLRIAG 538
            LL+ YC+S+VYYLLRKAKGL IEGHPVV SLVEIRLFLEKIRPIDKKL YQIQKL R+ G
Sbjct: 63   LLLDYCQSLVYYLLRKAKGLSIEGHPVVHSLVEIRLFLEKIRPIDKKLQYQIQKLTRVTG 122

Query: 539  GVGKKVEDDEKETNASKNNEDLLRYRPNPDMLVKRSDVDTQDG-DGVYRPPKIAPT---- 703
               +KV   EK++  ++N EDLL+YRPNPDML+ ++D+ ++ G  GVYRPPK AP     
Sbjct: 123  NAVEKVSSGEKDSE-TQNTEDLLKYRPNPDMLISKTDMTSEGGVGGVYRPPKFAPASMEE 181

Query: 704  EEMSKLEKIALRKDKMLHQKAKQSDFMRGLMDDLEGKPEEVKETFGAESRDLKRYRARMD 883
            ++MSK E+  LRK+K   ++A+QS ++R LMDDLEG+PEEV+E  G ESR+L RY+ +M+
Sbjct: 182  DKMSKQERNVLRKEKETLRQARQSAYVRELMDDLEGRPEEVREIVGTESRELIRYKEKME 241

Query: 884  ERARQEEELFTRAPLTXXXXXXXXXXXXSSNGLSALTDGFDDEIKTFGFEGDESTRTPGF 1063
            +RARQEEELFTRAPLT            S NGL  LTD F DEIKT   E D   +  GF
Sbjct: 242  QRARQEEELFTRAPLTRTEKKKEKHLRKSRNGLLGLTDSFYDEIKTLPMEEDFGEKMSGF 301

Query: 1064 NNPSSRGKKFNKHK 1105
            NN  S G+KF K K
Sbjct: 302  NN--SGGRKFKKRK 313


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